ccle rna-seq dataset (Broad Institute Inc)
90
Structured Review
Broad Institute Inc
ccle rna-seq dataset
Ccle Rna Seq Dataset, supplied by Broad Institute Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/gene+expression+data/ccle+cell+line+gene+expression+data/pm34986355-362-0-7
Average 90 stars, based on 1 article reviews
Ccle Rna Seq Dataset, supplied by Broad Institute Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/gene+expression+data/ccle+cell+line+gene+expression+data/pm34986355-362-0-7
Average 90 stars, based on 1 article reviews
ccle rna-seq dataset - by Bioz Stars,
2026-11
90/100 stars
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Expressing:Article Title: Systematic pan‐cancer analysis identifies RBM39 as an immunological and prognostic biomarker Article Snippet: .. Each tumour cell line's CCLE‐based other:Article Title: Systematic pan-cancer analysis identifies RBM39 as an immunological and prognostic biomarker. Article Snippet: Each tumour cell line's CCLE- based expression data was obtained from the Broad Institute's Portal (https://porta ls.broad insti tute.org/). Article Title: Integrative clinical and molecular characterization of translocation renal cell carcinoma. Article Snippet: Sample concentrations were measured using a NanoDrop 8000 Spectrophotometer (Thermo Fisher Scientific) and sequencing libraries were prepared with poly(A) selection. Article Title: Genomic and experimental evidence that ALK ATI does not predict single agent sensitivity to ALK inhibitors Article Snippet: Cell line expression and drug sensitivity data: CCLE 2019 RNA-seq gene expression data for 1019 cell lines were downloaded from the Broad Institute CCLE website ( https://portals.broadinstitute.org/ccle ). CRISPR:Article Title: Analysis of CRISPR-Cas9 screens identifies genetic dependencies in melanoma. Article Snippet: .. We would like to thank the Broad Institute DepMap team for generating and sharing the CRISPR-Cas9 screen data and Gene Expression:Article Title: Analysis of CRISPR-Cas9 screens identifies genetic dependencies in melanoma. Article Snippet: .. We would like to thank the Broad Institute DepMap team for generating and sharing the CRISPR-Cas9 screen data and Article Title: CD44-hyaluronan mediating endocytosis of iron-platinum alloy nanoparticles induces ferroptotic cell death in mesenchymal-state lung cancer cells with tyrosine kinase inhibitor resistance. Article Snippet: While tyrosine kinase inhibitor resistance in cancer is a critical issue in the medical field, it is important for clinical testing as well, since it affects the ultimate outcome of cancer therapy.. Yet, no effective solutions have been implemented till date.. Clinical observations after tyrosine kinase inhibitor treatment reveal that acquired resistance inevitably limits the curative effects of non-small cell lung cancer treatment because of mutations in the epidermal growth factor receptor gene, which are accompanied by epithelial-mesenchymal transition. Sequencing:Article Title: Allelic expression patterns of imprinted and non-imprinted genes in cancer cell lines from multiple histologies. Article Snippet: .. The GDC Legacy Archive was later retired; however, the Article Title: Allelic expression patterns of imprinted and non-imprinted genes in cancer cell lines from multiple histologies Article Snippet: .. The GDC Legacy Archive was later retired; however, the |
![(A) Cohen’s h values for pairwise comparisons between 𝒞 and the other two groups: ℬ and ℐ . Primate <t>Specific</t> Ratios are calculated as in . A higher absolute Cohen’s h indicates a greater difference in ratios between the two compared groups. Green bar represents ℬ , orange bar represents ℐ , and blue bars represent 𝒞 . (B) Results of Fisher’s exact tests for pairwise comparisons between each of ℬ , ℐ , and 𝒞 and each control group ( ℱ and ℛ ), together with the comparison between ℱ and ℛ . Primate Specific Ratios are calculated as in . Statistical significance is denoted by asterisks. Results with p-values less than 0.01 are indicated by two asterisks (**), results with p-values less than 0.05 are indicated by one asterisk (*), and all other results are marked as ns . Green bar represents ℬ , orange bar represents ℐ , blue bar represents 𝒞 , gray bars represent ℛ , and purple bars represent ℱ . (C) The number of tissues corresponding to each quantile for the brain <t>genes</t> and immune-related genes. Green bars represent ℬ , orange bars represent ℐ , and gray bars represent all genes that have at least one highly expressed <t>tissue</t> in Human Protein Atlas [ , ]. (D) The number and ratio of genes highly expressed specifically in brain tissues or immune-related tissues, out of 1019 brain genes and 586 immune-related genes, respectively.](https://pub-med-central-images-cdn.bioz.com/pub_med_central_ids_ending_with_0339/pmc13160339/pmc13160339__pone.0348713.e089.jpg)