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Genedata Inc expressionist® analyst software
Expressionist® Analyst Software, supplied by Genedata Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/expressionist+software/expressionist++analyst+software/pm40576468-407-10-10
Average 90 stars, based on 1 article reviews
expressionist® analyst software - by Bioz Stars, 2026-10
90/100 stars

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Article Title: DNA METHYLTRANSFERASE 1 is involved in (m)CG and (m)CCG DNA methylation and is essential for sporophyte development in Physcomitrella patens.
Article Snippet: ΔPpmet deletion mutant which lost CG and unexpectedly CCG methylation at loci tested.. In order to evaluate the extent of CCG methylation by MET1, we reexamined the Arabidopsis thaliana Atmet1 mutant methylome and found a similar pattern of methylation loss, suggesting that maintenance of DNA methylation by MET1 is conserved through land plant evolution.. While ΔPpmet displayed no phenotypic alterations during its gametophytic phase, it failed to develop sporophytes, indicating that PpMET plays a role in gametogenesis or early sporophyte development.

Article Title: The genetic architecture of the pepper metabolome provides insights into the regulation of capsianoside biosynthesis
Article Snippet: Principal component analysis, dendrogram, correlation matrix, and heatmaps were either designed by Genedata Expressionist® Analyst software or MetaboAnalyst 5.0 ( ).

Article Title: Genome-wide association analysis and linkage mapping decipher the genetic control of primary metabolites and quality traits in Capsicum.
Article Snippet: Julia von Steimker , Regina Wendenburg, Annabella Klemmer, Macellaro Rosaria, Alisdair R. Fernie , Saleh Alseekh and Pasquale Tripodi Max-Planck-Institute of Molecular Plant Physiology, Am Mühlenberg 1, Potsdam-Golm 14476, Germany, Research Centre for Vegetable and Ornamental Crops, Council for Agricultural Research and Economics (CREA), 84098 Pontecagnano Faiano, Italy, and Center of Plant Systems Biology and Biotechnology, 139 Ruski Blvd, Plovdiv 4000, Bulgaria

Software:

Article Title: Comparison of hepatocarcinogen-induced gene expression profiles in conventional primary rat hepatocytes with in vivo rat liver.
Article Snippet: At present, substantial efforts are focused on the development of in vitro assays coupled with ‘‘omics’’ technologies for the identification of carcinogenic substances as an alternative to the classical 2-year rodent carcinogenicity bioassay.. A prerequisite for the eventual regulatory acceptance of such assays, however, is the in vivo relevance of the observed in vitro findings.. In the current study, hepatocarcinogen-induced gene expression profiles generated after the exposure of conventional cultures of primary rat hepatocytes to three non-genotoxic carcinogens (methapyrilene hydrochloride, piperonyl butoxide, and Wy-14643), three genotoxic carcinogens (aflatoxin B1, 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone, and 2-nitrofluorene), and two non-carcinogens (nifedipine and clonidine) are compared with previously obtained in vivo data after oral administration for up to 14 days of the same hepatocarcinogens to rats.

Article Title: Genomic profiling uncovers a molecular pattern for toxicological characterization of mutagens and promutagens in vitro.
Article Snippet: Illumina BeadStudio Software was used for condensing raw data and further to ensure array quality based on different control bead parameters as described for a previous study (Boehme et al., 2009). .. Thereafter, data were uploaded into Genedata’s Expressionist Analyst software (Genedata AG, Basel, Switzerland) for data normalization and statistical analysis. ..

Gene Expression:

Article Title: Molecular Signatures Associated with Mx1-Mediated Resistance to Highly Pathogenic Influenza Virus Infection: Mechanisms of Survival
Article Snippet: .. Global gene expression in infected lungs was analyzed using GeneData Expressionist, Analyst Module (version 2.2.1); Spotfire DecisionSite for Functional Genomics version 9; and Ingenuity Pathways Analysis (IPA) (Ingenuity Systems, Inc., Redwood City, CA). ..

Infection:

Article Title: Molecular Signatures Associated with Mx1-Mediated Resistance to Highly Pathogenic Influenza Virus Infection: Mechanisms of Survival
Article Snippet: .. Global gene expression in infected lungs was analyzed using GeneData Expressionist, Analyst Module (version 2.2.1); Spotfire DecisionSite for Functional Genomics version 9; and Ingenuity Pathways Analysis (IPA) (Ingenuity Systems, Inc., Redwood City, CA). ..

Functional Assay:

Article Title: Molecular Signatures Associated with Mx1-Mediated Resistance to Highly Pathogenic Influenza Virus Infection: Mechanisms of Survival
Article Snippet: .. Global gene expression in infected lungs was analyzed using GeneData Expressionist, Analyst Module (version 2.2.1); Spotfire DecisionSite for Functional Genomics version 9; and Ingenuity Pathways Analysis (IPA) (Ingenuity Systems, Inc., Redwood City, CA). ..

Indirect Immunoperoxidase Assay:

Article Title: Molecular Signatures Associated with Mx1-Mediated Resistance to Highly Pathogenic Influenza Virus Infection: Mechanisms of Survival
Article Snippet: .. Global gene expression in infected lungs was analyzed using GeneData Expressionist, Analyst Module (version 2.2.1); Spotfire DecisionSite for Functional Genomics version 9; and Ingenuity Pathways Analysis (IPA) (Ingenuity Systems, Inc., Redwood City, CA). ..



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