Site-directed Mutagenesis:Article Title: Interspecies regulation of virulence through gingipain inhibition by a Tannerella forsythia serpin.
Article Snippet: .. M115.648782 Neutrophil elastase (NE) Athens Research & Technology (now: Athens Bioscience) Cat#: 16-14- 051200 Alpha 2 Macroglobulin Athens Research & Technology (now: Athens Bioscience) Cat#: 16-16- 012013 Trypsin from bovine pancreas Merck SigmaAldrich Cat#: T8802 FITC-casein ThermoFisher Scientific Cat#: 23267 © The Author(s) EMBO reports 11 Reagent/Resource Reference or Source Identifier or Catalog Number QuikChange Lightning site-directed mutagenesis kit Agilent Technologies Cat#: 210518 HiLoad Superdex 75 pg preparative size exclusion chromatography columns Cytiva Cat#: 28989333 Pierce ECL Western Blotting Substrate ThermoFisher Scientific Cat#: 32209 Ketamine; VetaKetam VetAgro, Lublin, Poland Xylazine; Sedasin Biowet Puławy, Puławy, Poland Puralube Vet Pharmaderm, Tunis, Tunisia) TRIzol reagent ThermoFisher Scientific Cat#: 15596026 mirVana miRNA Isolation Kit ThermoFisher Scientific Cat#: AM1560 High-Capacity cDNA Reverse Transcription Kit ThermoFisher Scientific Cat#: 4374966 PowerUp Sybr Green master mix ThermoFisher Scientific Cat#: A25742 Software GraphPad Prism Version 11.0.2 https://www. .. graphpad.com/ FlowJo software https://www.
Size-exclusion Chromatography:Article Title: Interspecies regulation of virulence through gingipain inhibition by a Tannerella forsythia serpin.
Article Snippet: .. M115.648782 Neutrophil elastase (NE) Athens Research & Technology (now: Athens Bioscience) Cat#: 16-14- 051200 Alpha 2 Macroglobulin Athens Research & Technology (now: Athens Bioscience) Cat#: 16-16- 012013 Trypsin from bovine pancreas Merck SigmaAldrich Cat#: T8802 FITC-casein ThermoFisher Scientific Cat#: 23267 © The Author(s) EMBO reports 11 Reagent/Resource Reference or Source Identifier or Catalog Number QuikChange Lightning site-directed mutagenesis kit Agilent Technologies Cat#: 210518 HiLoad Superdex 75 pg preparative size exclusion chromatography columns Cytiva Cat#: 28989333 Pierce ECL Western Blotting Substrate ThermoFisher Scientific Cat#: 32209 Ketamine; VetaKetam VetAgro, Lublin, Poland Xylazine; Sedasin Biowet Puławy, Puławy, Poland Puralube Vet Pharmaderm, Tunis, Tunisia) TRIzol reagent ThermoFisher Scientific Cat#: 15596026 mirVana miRNA Isolation Kit ThermoFisher Scientific Cat#: AM1560 High-Capacity cDNA Reverse Transcription Kit ThermoFisher Scientific Cat#: 4374966 PowerUp Sybr Green master mix ThermoFisher Scientific Cat#: A25742 Software GraphPad Prism Version 11.0.2 https://www. .. graphpad.com/ FlowJo software https://www.
Western Blot:Article Title: Interspecies regulation of virulence through gingipain inhibition by a Tannerella forsythia serpin.
Article Snippet: .. M115.648782 Neutrophil elastase (NE) Athens Research & Technology (now: Athens Bioscience) Cat#: 16-14- 051200 Alpha 2 Macroglobulin Athens Research & Technology (now: Athens Bioscience) Cat#: 16-16- 012013 Trypsin from bovine pancreas Merck SigmaAldrich Cat#: T8802 FITC-casein ThermoFisher Scientific Cat#: 23267 © The Author(s) EMBO reports 11 Reagent/Resource Reference or Source Identifier or Catalog Number QuikChange Lightning site-directed mutagenesis kit Agilent Technologies Cat#: 210518 HiLoad Superdex 75 pg preparative size exclusion chromatography columns Cytiva Cat#: 28989333 Pierce ECL Western Blotting Substrate ThermoFisher Scientific Cat#: 32209 Ketamine; VetaKetam VetAgro, Lublin, Poland Xylazine; Sedasin Biowet Puławy, Puławy, Poland Puralube Vet Pharmaderm, Tunis, Tunisia) TRIzol reagent ThermoFisher Scientific Cat#: 15596026 mirVana miRNA Isolation Kit ThermoFisher Scientific Cat#: AM1560 High-Capacity cDNA Reverse Transcription Kit ThermoFisher Scientific Cat#: 4374966 PowerUp Sybr Green master mix ThermoFisher Scientific Cat#: A25742 Software GraphPad Prism Version 11.0.2 https://www. .. graphpad.com/ FlowJo software https://www.
Isolation:Article Title: Interspecies regulation of virulence through gingipain inhibition by a Tannerella forsythia serpin.
Article Snippet: .. M115.648782 Neutrophil elastase (NE) Athens Research & Technology (now: Athens Bioscience) Cat#: 16-14- 051200 Alpha 2 Macroglobulin Athens Research & Technology (now: Athens Bioscience) Cat#: 16-16- 012013 Trypsin from bovine pancreas Merck SigmaAldrich Cat#: T8802 FITC-casein ThermoFisher Scientific Cat#: 23267 © The Author(s) EMBO reports 11 Reagent/Resource Reference or Source Identifier or Catalog Number QuikChange Lightning site-directed mutagenesis kit Agilent Technologies Cat#: 210518 HiLoad Superdex 75 pg preparative size exclusion chromatography columns Cytiva Cat#: 28989333 Pierce ECL Western Blotting Substrate ThermoFisher Scientific Cat#: 32209 Ketamine; VetaKetam VetAgro, Lublin, Poland Xylazine; Sedasin Biowet Puławy, Puławy, Poland Puralube Vet Pharmaderm, Tunis, Tunisia) TRIzol reagent ThermoFisher Scientific Cat#: 15596026 mirVana miRNA Isolation Kit ThermoFisher Scientific Cat#: AM1560 High-Capacity cDNA Reverse Transcription Kit ThermoFisher Scientific Cat#: 4374966 PowerUp Sybr Green master mix ThermoFisher Scientific Cat#: A25742 Software GraphPad Prism Version 11.0.2 https://www. .. graphpad.com/ FlowJo software https://www.
Reverse Transcription:Article Title: Interspecies regulation of virulence through gingipain inhibition by a Tannerella forsythia serpin.
Article Snippet: .. M115.648782 Neutrophil elastase (NE) Athens Research & Technology (now: Athens Bioscience) Cat#: 16-14- 051200 Alpha 2 Macroglobulin Athens Research & Technology (now: Athens Bioscience) Cat#: 16-16- 012013 Trypsin from bovine pancreas Merck SigmaAldrich Cat#: T8802 FITC-casein ThermoFisher Scientific Cat#: 23267 © The Author(s) EMBO reports 11 Reagent/Resource Reference or Source Identifier or Catalog Number QuikChange Lightning site-directed mutagenesis kit Agilent Technologies Cat#: 210518 HiLoad Superdex 75 pg preparative size exclusion chromatography columns Cytiva Cat#: 28989333 Pierce ECL Western Blotting Substrate ThermoFisher Scientific Cat#: 32209 Ketamine; VetaKetam VetAgro, Lublin, Poland Xylazine; Sedasin Biowet Puławy, Puławy, Poland Puralube Vet Pharmaderm, Tunis, Tunisia) TRIzol reagent ThermoFisher Scientific Cat#: 15596026 mirVana miRNA Isolation Kit ThermoFisher Scientific Cat#: AM1560 High-Capacity cDNA Reverse Transcription Kit ThermoFisher Scientific Cat#: 4374966 PowerUp Sybr Green master mix ThermoFisher Scientific Cat#: A25742 Software GraphPad Prism Version 11.0.2 https://www. .. graphpad.com/ FlowJo software https://www.
SYBR Green Assay:Article Title: Interspecies regulation of virulence through gingipain inhibition by a Tannerella forsythia serpin.
Article Snippet: .. M115.648782 Neutrophil elastase (NE) Athens Research & Technology (now: Athens Bioscience) Cat#: 16-14- 051200 Alpha 2 Macroglobulin Athens Research & Technology (now: Athens Bioscience) Cat#: 16-16- 012013 Trypsin from bovine pancreas Merck SigmaAldrich Cat#: T8802 FITC-casein ThermoFisher Scientific Cat#: 23267 © The Author(s) EMBO reports 11 Reagent/Resource Reference or Source Identifier or Catalog Number QuikChange Lightning site-directed mutagenesis kit Agilent Technologies Cat#: 210518 HiLoad Superdex 75 pg preparative size exclusion chromatography columns Cytiva Cat#: 28989333 Pierce ECL Western Blotting Substrate ThermoFisher Scientific Cat#: 32209 Ketamine; VetaKetam VetAgro, Lublin, Poland Xylazine; Sedasin Biowet Puławy, Puławy, Poland Puralube Vet Pharmaderm, Tunis, Tunisia) TRIzol reagent ThermoFisher Scientific Cat#: 15596026 mirVana miRNA Isolation Kit ThermoFisher Scientific Cat#: AM1560 High-Capacity cDNA Reverse Transcription Kit ThermoFisher Scientific Cat#: 4374966 PowerUp Sybr Green master mix ThermoFisher Scientific Cat#: A25742 Software GraphPad Prism Version 11.0.2 https://www. .. graphpad.com/ FlowJo software https://www.
Software:Article Title: Interspecies regulation of virulence through gingipain inhibition by a Tannerella forsythia serpin.
Article Snippet: .. M115.648782 Neutrophil elastase (NE) Athens Research & Technology (now: Athens Bioscience) Cat#: 16-14- 051200 Alpha 2 Macroglobulin Athens Research & Technology (now: Athens Bioscience) Cat#: 16-16- 012013 Trypsin from bovine pancreas Merck SigmaAldrich Cat#: T8802 FITC-casein ThermoFisher Scientific Cat#: 23267 © The Author(s) EMBO reports 11 Reagent/Resource Reference or Source Identifier or Catalog Number QuikChange Lightning site-directed mutagenesis kit Agilent Technologies Cat#: 210518 HiLoad Superdex 75 pg preparative size exclusion chromatography columns Cytiva Cat#: 28989333 Pierce ECL Western Blotting Substrate ThermoFisher Scientific Cat#: 32209 Ketamine; VetaKetam VetAgro, Lublin, Poland Xylazine; Sedasin Biowet Puławy, Puławy, Poland Puralube Vet Pharmaderm, Tunis, Tunisia) TRIzol reagent ThermoFisher Scientific Cat#: 15596026 mirVana miRNA Isolation Kit ThermoFisher Scientific Cat#: AM1560 High-Capacity cDNA Reverse Transcription Kit ThermoFisher Scientific Cat#: 4374966 PowerUp Sybr Green master mix ThermoFisher Scientific Cat#: A25742 Software GraphPad Prism Version 11.0.2 https://www. .. graphpad.com/ FlowJo software https://www.
Purification:Article Title: 1H-pyrazolo[4,3-G]isoquinoline and 1H-pyrazolo[4,3-g]quinoline derivatives as alpha-1-antitrypsin modulators for treating alpha-1-antitrypsin deficiency (AATD)
Article Snippet: .. Materials Reagents PBS buffer (media prep)+0.01% BRIJ35 detergent (Calbiochem catalog #203728) Opti-MEM media (Fisher 11058-021) Human neutrophil elastase (hNE, Athens Research #16-14-051200) 3.4 μM stock (0.1 mg/mL) prepared in 50 mM Na Acetate, pH 5.5, 150 mM NaCl, stored at −80° C. Elastase substrate V (ES V, fluorescent peptide substrate MeOSuc-Ala-Ala-Pro-Val-AMC, Calbiochem catalog #324740) 20 mM stock in DMSO, stored at −20° C. Purified Z-AAT protein from human plasma; 12.9 μM (0.67 mg/mL) Z-AAT Vertex Cambridge Sample 4942, from patient #061-SSN, stored at −80 C Plates Corning 4511 (384 well black low volume) Instruments PerkinElmer® EnVisionTM Assay Protocol Pre-Incubation of Z-AAT with Compounds 1. ..
Article Title: Processes for preparing modulators of alpha-1 antitrypsin
Article Snippet: .. Materials Reagents PBS buffer (media prep)+0.01% BRIJ35 detergent (Calbiochem Catalog No. 203728) Opti-MEM media (Fisher Catalog No. 11058-021) Human neutrophil elastase (hNE, Athens Research Catalog No. 16-14-051200) 3.4 M stock (0.1 mg/mL) prepared in 50 mM Na Acetate, pH 5.5, 150 mM NaCl, stored at −80° C. Elastase substrate V (ES V, fluorescent peptide substrate MeOSuc-Ala-Ala-Pro-Val-AMC, Calbiochem Catalog No. 324740) 20 mM stock in DMSO, stored at −20° C. Purified Z-AAT protein from human plasma; 12.9 M (0.67 mg/mL) Z-AAT Vertex Cambridge Sample 4942, from patient #061-SSN, stored at −80C Plates Corning 4511 (384 well black low volume) Instruments PerkinElmer® EnVisionTM Assay Protocol Pre-Incubation of Z-AAT with Compounds 1. ..
Article Title: 7- or 8-hydroxy-isoquinoline and 7- or 8-hydroxy-quinoline derivatives as alpha-1-antitrypsin modulators for treating alpha-1-antitrypsin deficiency (AATD)
Article Snippet: .. Materials Reagents PBS buffer (media prep)+0.01% BRIJ35 detergent (Calbiochem catalog #203728) Opti-MEM media (Fisher 11058-021) Human neutrophil elastase (hNE, Athens Research #16-14-051200) 3.4 μM stock (0.1 mg/mL) prepared in 50 mM Na Acetate, pH 5.5, 150 mM NaCl, stored at −80° C. Elastase substrate V (ES V, fluorescent peptide substrate MeOSuc-Ala-Ala-Pro-Val-AMC, Calbiochem catalog #324740) 20 mM stock in DMSO, stored at −20° C. Purified Z-AAT protein from human plasma; 12.9 μM (0.67 mg/mL) Z-AAT Vertex Cambridge Sample 4942, from patient #061-SSN, stored at −80C Plates Corning 4511 (384 well black low volume) Instruments PerkinElmer® EnVisionTM Assay Protocol Pre-Incubation of Z-AAT with Compounds 1. ..
Article Title: Pyrano[4,3-b]indole derivatives as alpha-1-antitrypsin modulators for treating alpha-1-antitrypsin deficiency (AATD)
Article Snippet: .. Materials Reagents PBS buffer (media prep)+0.01% BRIJ35 detergent (Calbiochem catalog #203728) Opti-MEM media (Fisher 11058-021) Human neutrophil elastase (hNE, Athens Research #16-14-051200) 3.4 μM stock (0.1 mg/mL) prepared in 50 mM Na Acetate, pH 5.5, 150 mM NaCl, stored at −80° C. Elastase substrate V (ES V, fluorescent peptide substrate MeOSuc-Ala-Ala-Pro-Val-AMC, Calbiochem catalog #324740) 20 mM stock in DMSO, stored at −20° C. Purified Z-AAT protein from human plasma; 12.9 μM (0.67 mg/mL) Z-AAT Vertex Cambridge Sample 4942, from patient #061-SSN, stored at −80 C Plates Corning 4511 (384 well black low volume) Instruments PerkinElmer® EnVisionTM Assay Protocol Pre-Incubation of Z-AAT with Compounds 1. ..
Clinical Proteomics:Article Title: 1H-pyrazolo[4,3-G]isoquinoline and 1H-pyrazolo[4,3-g]quinoline derivatives as alpha-1-antitrypsin modulators for treating alpha-1-antitrypsin deficiency (AATD)
Article Snippet: .. Materials Reagents PBS buffer (media prep)+0.01% BRIJ35 detergent (Calbiochem catalog #203728) Opti-MEM media (Fisher 11058-021) Human neutrophil elastase (hNE, Athens Research #16-14-051200) 3.4 μM stock (0.1 mg/mL) prepared in 50 mM Na Acetate, pH 5.5, 150 mM NaCl, stored at −80° C. Elastase substrate V (ES V, fluorescent peptide substrate MeOSuc-Ala-Ala-Pro-Val-AMC, Calbiochem catalog #324740) 20 mM stock in DMSO, stored at −20° C. Purified Z-AAT protein from human plasma; 12.9 μM (0.67 mg/mL) Z-AAT Vertex Cambridge Sample 4942, from patient #061-SSN, stored at −80 C Plates Corning 4511 (384 well black low volume) Instruments PerkinElmer® EnVisionTM Assay Protocol Pre-Incubation of Z-AAT with Compounds 1. ..
Article Title: Processes for preparing modulators of alpha-1 antitrypsin
Article Snippet: .. Materials Reagents PBS buffer (media prep)+0.01% BRIJ35 detergent (Calbiochem Catalog No. 203728) Opti-MEM media (Fisher Catalog No. 11058-021) Human neutrophil elastase (hNE, Athens Research Catalog No. 16-14-051200) 3.4 M stock (0.1 mg/mL) prepared in 50 mM Na Acetate, pH 5.5, 150 mM NaCl, stored at −80° C. Elastase substrate V (ES V, fluorescent peptide substrate MeOSuc-Ala-Ala-Pro-Val-AMC, Calbiochem Catalog No. 324740) 20 mM stock in DMSO, stored at −20° C. Purified Z-AAT protein from human plasma; 12.9 M (0.67 mg/mL) Z-AAT Vertex Cambridge Sample 4942, from patient #061-SSN, stored at −80C Plates Corning 4511 (384 well black low volume) Instruments PerkinElmer® EnVisionTM Assay Protocol Pre-Incubation of Z-AAT with Compounds 1. ..
Article Title: 7- or 8-hydroxy-isoquinoline and 7- or 8-hydroxy-quinoline derivatives as alpha-1-antitrypsin modulators for treating alpha-1-antitrypsin deficiency (AATD)
Article Snippet: .. Materials Reagents PBS buffer (media prep)+0.01% BRIJ35 detergent (Calbiochem catalog #203728) Opti-MEM media (Fisher 11058-021) Human neutrophil elastase (hNE, Athens Research #16-14-051200) 3.4 μM stock (0.1 mg/mL) prepared in 50 mM Na Acetate, pH 5.5, 150 mM NaCl, stored at −80° C. Elastase substrate V (ES V, fluorescent peptide substrate MeOSuc-Ala-Ala-Pro-Val-AMC, Calbiochem catalog #324740) 20 mM stock in DMSO, stored at −20° C. Purified Z-AAT protein from human plasma; 12.9 μM (0.67 mg/mL) Z-AAT Vertex Cambridge Sample 4942, from patient #061-SSN, stored at −80C Plates Corning 4511 (384 well black low volume) Instruments PerkinElmer® EnVisionTM Assay Protocol Pre-Incubation of Z-AAT with Compounds 1. ..
Article Title: Pyrano[4,3-b]indole derivatives as alpha-1-antitrypsin modulators for treating alpha-1-antitrypsin deficiency (AATD)
Article Snippet: .. Materials Reagents PBS buffer (media prep)+0.01% BRIJ35 detergent (Calbiochem catalog #203728) Opti-MEM media (Fisher 11058-021) Human neutrophil elastase (hNE, Athens Research #16-14-051200) 3.4 μM stock (0.1 mg/mL) prepared in 50 mM Na Acetate, pH 5.5, 150 mM NaCl, stored at −80° C. Elastase substrate V (ES V, fluorescent peptide substrate MeOSuc-Ala-Ala-Pro-Val-AMC, Calbiochem catalog #324740) 20 mM stock in DMSO, stored at −20° C. Purified Z-AAT protein from human plasma; 12.9 μM (0.67 mg/mL) Z-AAT Vertex Cambridge Sample 4942, from patient #061-SSN, stored at −80 C Plates Corning 4511 (384 well black low volume) Instruments PerkinElmer® EnVisionTM Assay Protocol Pre-Incubation of Z-AAT with Compounds 1. ..
Derivative Assay:
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