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ebfp2 mito7  (Addgene inc)


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    Structured Review

    Addgene inc ebfp2 mito7
    Ebfp2 Mito7, supplied by Addgene inc, used in various techniques. Bioz Stars score: 93/100, based on 8 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/ebfp2+sequence/EBFP2-Mito-7+(Plasmid+%2355248)/pmc05716263-220-28-30
    Average 93 stars, based on 8 article reviews
    ebfp2 mito7 - by Bioz Stars, 2026-11
    93/100 stars

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    Related Articles

    Polymerase Chain Reaction:

    Article Title: Presynapses are mitophagy pit stops that prevent axon degeneration
    Article Snippet: .. Open reading frames (ORFs) of mito-EBFP2 (a gift from Michael Davidson; Addgene #55248), EGFP-OPTN (Addgene #188784), mt-Keima (a gift from Richard Youle; Addgene #72342), mito-mKeima XL (a gift from Wade Harper ) were first PCR amplified. ..

    Article Title: In situ cryo-ET visualization of mitochondrial depolarization and mitophagic engulfment
    Article Snippet: To generate mCherry-Parkin and BFP-mito lentiviruses for cell line generation 4E6 HEK293T cells were seeded into 10 cm plates and transfected the next day with 45 μL Mirus LT1 transfection reagent (MIR2300) added to a mixture of 5 μg each (15 μg total) of plasmids VSV-G (addgene: 8454), R8.74 (addgene: 22036) or CMV-Gagpol (addgene: 35614), and one of the following: pLV-mCherry-Parkin (this study), pLV-BFP-mito (this study), and Su9-GFP-HALO (addgene: 184905) in 1.5 mL Optimem (ThermoFischer catalog: 31985062) according to manufacturer recommendations. .. Both lentivirus plasmids were restriction subcloned using NheI and BsrGI into pMK1253 (addgene: 133058) from pBMN-mCherry-Parkin (addgene: 59419, PCR amplified to include a c-terminal BsrGI cut-site) and EBFP2-mito-7 (addgene: 55248). ..

    Amplification:

    Article Title: Presynapses are mitophagy pit stops that prevent axon degeneration
    Article Snippet: .. Open reading frames (ORFs) of mito-EBFP2 (a gift from Michael Davidson; Addgene #55248), EGFP-OPTN (Addgene #188784), mt-Keima (a gift from Richard Youle; Addgene #72342), mito-mKeima XL (a gift from Wade Harper ) were first PCR amplified. ..

    Article Title: In situ cryo-ET visualization of mitochondrial depolarization and mitophagic engulfment
    Article Snippet: To generate mCherry-Parkin and BFP-mito lentiviruses for cell line generation 4E6 HEK293T cells were seeded into 10 cm plates and transfected the next day with 45 μL Mirus LT1 transfection reagent (MIR2300) added to a mixture of 5 μg each (15 μg total) of plasmids VSV-G (addgene: 8454), R8.74 (addgene: 22036) or CMV-Gagpol (addgene: 35614), and one of the following: pLV-mCherry-Parkin (this study), pLV-BFP-mito (this study), and Su9-GFP-HALO (addgene: 184905) in 1.5 mL Optimem (ThermoFischer catalog: 31985062) according to manufacturer recommendations. .. Both lentivirus plasmids were restriction subcloned using NheI and BsrGI into pMK1253 (addgene: 133058) from pBMN-mCherry-Parkin (addgene: 59419, PCR amplified to include a c-terminal BsrGI cut-site) and EBFP2-mito-7 (addgene: 55248). ..

    Transfection:

    Article Title: IndiFluors: A New Full-Visible Color-Tunable Donor-Acceptor-Donor (D 1 -A-D 2 ) Fluorophore Family for Ratiometric pH Imaging during Mitophagy.
    Article Snippet: .. [13] Cellular Co-localization of PM-Mito-OH with Mito-BFP Experiment: HeLa cells were seeded in glass bottom confocal dish and after 24 hours, cells were transfected with EBFP2-Mito-7 (received as a gift from Michael Davidson (Addgene plasmid # 55248; http://n2t.net/addgene:55248; RRID: Addgene_55248) plasmid using lipofectamine 2000 (Invitrogen), cells were kept in CO2 incubator for 24 hours and then imaged after staining with PM-Mito-OH and MitoTracker Green for 20 minutes respectively. .. 2.3 Biological Studies: Cell Culture: Human cervical cancer cell line HeLa was obtained from American Type Culture Collection (ATCC, Manassas, VA, USA).

    Article Title: Decoupling SARS-CoV-2 ORF6 localization and interferon antagonism.
    Article Snippet: .. Roughly 6500 HeLa cells were seeded into an eight-well #1.5 glass bottom chamber slide (Ibidi #80826) and transfected with 100 ng of the indicated ORF6 expression construct along with either 50 ng of an ER marker (eGFP-Calnexin; Addgene 57122), 50 ng of a Golgi marker [mTag-β-galactosidase (1-61); Addgene], or 50 ng of a mitochondrial marker (eBFP2-Mito, Addgene 55248). ..

    Article Title: Decoupling SARS-CoV-2 ORF6 localization and interferon antagonism
    Article Snippet: .. Roughly 6,500 HeLa cells were seeded into an 8-well #1.5 glass bottom chamber slide (Ibidi #80826) and transfected with 100 ng of the indicated ORF6 expression construct along with either 50 ng of an ER marker (eGFP-Calnexin; Addgene: 57122), 50 ng of a Golgi marker [mTag-β-galactosidase (1-61)], or 50 ng of a mitochondrial marker (eBFP2-Mito, Addgene: 55248). ..

    Article Title: Methods for imaging mammalian mitochondrial morphology: a prospective on MitoGraph
    Article Snippet: .. For some transfection reagents, reducing the amount mito-YFP, and not using so-called “filler” DNA may reduce overall transfection efficiency. table ft1 table-wrap mode="anchored" t5 caption a7 Mitochondrial T argeted Fluorescent Protein Excitation Emission Addgene # Ref Fluorescent probes used to visualize mitochondria Blue fluorescent proteins mito-eBFP2 383 448 55248 [ 82 ] mito-tagBFP 402 457 49151 [ 83 ] Cyan fluorescent proteins mito-eCFP 433 475 55345 * mito-mCerulean 433 475 55384 * mito-mCerulean3 433 475 55433 [ 84 ] Green fluorescent proteins mito-mEmerald 487 509 54160 [ 85 ] mito-Clover 505 515 56529 [ 86 ] TOMM20-mEGFP 488 507 87423 [ 87 ] Yellow fluorescent proteins mito-YFP 513 527 56596 [ 88 ] mito-YPet 513 527 56637 * mito-mV enus 515 528 56619 * mito-mCitrine 516 529 56563 * Orange fluorescent proteins mito-mKO 548 561 57848 [ 88 ] mito-mKOet 548 561 57931 mito- mOrange2 549 565 57969 [ 89 ] mito-mKO2 551 565 57886 Red fluorescent proteins mito-tdTurboRFP 553 576 58062 * mito-tdTomato 554 581 58115 [ 90 ] mito-mT agRFP-T 555 584 58023 [ 91 ] mito-mT agRFP-T2 555 584 58041 * mito-DsRed2 558 583 55838 * mito-mRuby 558 605 55874 * mito-mRuby2 559 600 55905 [ 86 ] mito-mStrawberry 574 596 55941 * mito-mCherry 587 610 55102 [ 92 ] Far-red fluorescent proteins mito-HcRed1 588 618 55842 * mito-mPlum 590 649 55988 [ 91 ] mito- mRaspberry 598 625 55931 Infrared fluorescent protein mito-mIFP 683 704 56231 [ 93 ] Photo-reversible fluorescent proteins mito-iLOV ~ Photo-reversible fluorescent protein that outperforms eGFP 450 495 56519 * mito-Dronpa ~ Reversibly switchable photoactivatable fluorescent protein; switched off by 488nm; reversed by weak 405 nm light 503 518 57288 [ 94 ] Photo-convertible or photo-activatable tools for monitoring dynamics events mito-PAGFP ~ Fluorescence activated after illumination with 405 nm light. ..

    Plasmid Preparation:

    Article Title: IndiFluors: A New Full-Visible Color-Tunable Donor-Acceptor-Donor (D 1 -A-D 2 ) Fluorophore Family for Ratiometric pH Imaging during Mitophagy.
    Article Snippet: .. [13] Cellular Co-localization of PM-Mito-OH with Mito-BFP Experiment: HeLa cells were seeded in glass bottom confocal dish and after 24 hours, cells were transfected with EBFP2-Mito-7 (received as a gift from Michael Davidson (Addgene plasmid # 55248; http://n2t.net/addgene:55248; RRID: Addgene_55248) plasmid using lipofectamine 2000 (Invitrogen), cells were kept in CO2 incubator for 24 hours and then imaged after staining with PM-Mito-OH and MitoTracker Green for 20 minutes respectively. .. 2.3 Biological Studies: Cell Culture: Human cervical cancer cell line HeLa was obtained from American Type Culture Collection (ATCC, Manassas, VA, USA).

    Article Title: Endosomes facilitate mitochondrial clearance by enhancing Parkin recruitment to mitochondria
    Article Snippet: .. Following constructs used were received from Addgene, YFP-Parkin was a gift from Richard Youle (Addgene plasmid # 23955) [ ], GFP-Rab5B and GFP-Rab7A were a gift from Gia Voeltz [ ], EBFP2-Mito-7 was a gift from Michael Davidson (Addgene plasmid # 55248) [ ], pCAG-VSVG was a gift from Arthur Nienhuis and Patrick Salmon (Addgene plasmid # 35616), pUMVC was a gift from Bob Weinberg (Addgene plasmid # 8449) [ ], PX458 was a gift from Feng Zhang (Addgene plasmid # 48138) [ ]. .. Following antibodies were used in this study, RFP antibody (Chromotek Cat # 5f8-100), Polyclonal CARP2 antibody raised in Rabbit (Generated in our laboratory), GAPDH (Abgenex Cat # 10-10011), Beta Actin (Cat # E-AB-20058), Tubulin (Sigma-Aldrich Cat # T6199), ATG5 (CST Cat # 12994T), UQCRC1 (For Complex III, Core I, Invitrogen Cat # 16D10AD9AH5), TIMM23 (SCBT Cat # sc-514463), GFP (Mouse Living Colours Clonetek Cat # 632375), GFP (Invitrogen Cat # A6455)Parkin (SCBT Cat # sc-32282), Anti-mouse HRP (Invitrogen Cat # 61-6520), Anti-rabbit HRP (Invitrogen Cat # 65-6120), Anti-rat HRP (Jackson ImmunoResearch Cat # 712-035-150).

    Staining:

    Article Title: IndiFluors: A New Full-Visible Color-Tunable Donor-Acceptor-Donor (D 1 -A-D 2 ) Fluorophore Family for Ratiometric pH Imaging during Mitophagy.
    Article Snippet: .. [13] Cellular Co-localization of PM-Mito-OH with Mito-BFP Experiment: HeLa cells were seeded in glass bottom confocal dish and after 24 hours, cells were transfected with EBFP2-Mito-7 (received as a gift from Michael Davidson (Addgene plasmid # 55248; http://n2t.net/addgene:55248; RRID: Addgene_55248) plasmid using lipofectamine 2000 (Invitrogen), cells were kept in CO2 incubator for 24 hours and then imaged after staining with PM-Mito-OH and MitoTracker Green for 20 minutes respectively. .. 2.3 Biological Studies: Cell Culture: Human cervical cancer cell line HeLa was obtained from American Type Culture Collection (ATCC, Manassas, VA, USA).

    Expressing:

    Article Title: Decoupling SARS-CoV-2 ORF6 localization and interferon antagonism.
    Article Snippet: .. Roughly 6500 HeLa cells were seeded into an eight-well #1.5 glass bottom chamber slide (Ibidi #80826) and transfected with 100 ng of the indicated ORF6 expression construct along with either 50 ng of an ER marker (eGFP-Calnexin; Addgene 57122), 50 ng of a Golgi marker [mTag-β-galactosidase (1-61); Addgene], or 50 ng of a mitochondrial marker (eBFP2-Mito, Addgene 55248). ..

    Article Title: Decoupling SARS-CoV-2 ORF6 localization and interferon antagonism
    Article Snippet: .. Roughly 6,500 HeLa cells were seeded into an 8-well #1.5 glass bottom chamber slide (Ibidi #80826) and transfected with 100 ng of the indicated ORF6 expression construct along with either 50 ng of an ER marker (eGFP-Calnexin; Addgene: 57122), 50 ng of a Golgi marker [mTag-β-galactosidase (1-61)], or 50 ng of a mitochondrial marker (eBFP2-Mito, Addgene: 55248). ..

    Construct:

    Article Title: Decoupling SARS-CoV-2 ORF6 localization and interferon antagonism.
    Article Snippet: .. Roughly 6500 HeLa cells were seeded into an eight-well #1.5 glass bottom chamber slide (Ibidi #80826) and transfected with 100 ng of the indicated ORF6 expression construct along with either 50 ng of an ER marker (eGFP-Calnexin; Addgene 57122), 50 ng of a Golgi marker [mTag-β-galactosidase (1-61); Addgene], or 50 ng of a mitochondrial marker (eBFP2-Mito, Addgene 55248). ..

    Article Title: Endosomes facilitate mitochondrial clearance by enhancing Parkin recruitment to mitochondria
    Article Snippet: .. Following constructs used were received from Addgene, YFP-Parkin was a gift from Richard Youle (Addgene plasmid # 23955) [ ], GFP-Rab5B and GFP-Rab7A were a gift from Gia Voeltz [ ], EBFP2-Mito-7 was a gift from Michael Davidson (Addgene plasmid # 55248) [ ], pCAG-VSVG was a gift from Arthur Nienhuis and Patrick Salmon (Addgene plasmid # 35616), pUMVC was a gift from Bob Weinberg (Addgene plasmid # 8449) [ ], PX458 was a gift from Feng Zhang (Addgene plasmid # 48138) [ ]. .. Following antibodies were used in this study, RFP antibody (Chromotek Cat # 5f8-100), Polyclonal CARP2 antibody raised in Rabbit (Generated in our laboratory), GAPDH (Abgenex Cat # 10-10011), Beta Actin (Cat # E-AB-20058), Tubulin (Sigma-Aldrich Cat # T6199), ATG5 (CST Cat # 12994T), UQCRC1 (For Complex III, Core I, Invitrogen Cat # 16D10AD9AH5), TIMM23 (SCBT Cat # sc-514463), GFP (Mouse Living Colours Clonetek Cat # 632375), GFP (Invitrogen Cat # A6455)Parkin (SCBT Cat # sc-32282), Anti-mouse HRP (Invitrogen Cat # 61-6520), Anti-rabbit HRP (Invitrogen Cat # 65-6120), Anti-rat HRP (Jackson ImmunoResearch Cat # 712-035-150).

    Article Title: Decoupling SARS-CoV-2 ORF6 localization and interferon antagonism
    Article Snippet: .. Roughly 6,500 HeLa cells were seeded into an 8-well #1.5 glass bottom chamber slide (Ibidi #80826) and transfected with 100 ng of the indicated ORF6 expression construct along with either 50 ng of an ER marker (eGFP-Calnexin; Addgene: 57122), 50 ng of a Golgi marker [mTag-β-galactosidase (1-61)], or 50 ng of a mitochondrial marker (eBFP2-Mito, Addgene: 55248). ..

    Marker:

    Article Title: Decoupling SARS-CoV-2 ORF6 localization and interferon antagonism.
    Article Snippet: .. Roughly 6500 HeLa cells were seeded into an eight-well #1.5 glass bottom chamber slide (Ibidi #80826) and transfected with 100 ng of the indicated ORF6 expression construct along with either 50 ng of an ER marker (eGFP-Calnexin; Addgene 57122), 50 ng of a Golgi marker [mTag-β-galactosidase (1-61); Addgene], or 50 ng of a mitochondrial marker (eBFP2-Mito, Addgene 55248). ..

    Article Title: Decoupling SARS-CoV-2 ORF6 localization and interferon antagonism
    Article Snippet: .. Roughly 6,500 HeLa cells were seeded into an 8-well #1.5 glass bottom chamber slide (Ibidi #80826) and transfected with 100 ng of the indicated ORF6 expression construct along with either 50 ng of an ER marker (eGFP-Calnexin; Addgene: 57122), 50 ng of a Golgi marker [mTag-β-galactosidase (1-61)], or 50 ng of a mitochondrial marker (eBFP2-Mito, Addgene: 55248). ..

    Fluorescence:

    Article Title: Methods for imaging mammalian mitochondrial morphology: a prospective on MitoGraph
    Article Snippet: .. For some transfection reagents, reducing the amount mito-YFP, and not using so-called “filler” DNA may reduce overall transfection efficiency. table ft1 table-wrap mode="anchored" t5 caption a7 Mitochondrial T argeted Fluorescent Protein Excitation Emission Addgene # Ref Fluorescent probes used to visualize mitochondria Blue fluorescent proteins mito-eBFP2 383 448 55248 [ 82 ] mito-tagBFP 402 457 49151 [ 83 ] Cyan fluorescent proteins mito-eCFP 433 475 55345 * mito-mCerulean 433 475 55384 * mito-mCerulean3 433 475 55433 [ 84 ] Green fluorescent proteins mito-mEmerald 487 509 54160 [ 85 ] mito-Clover 505 515 56529 [ 86 ] TOMM20-mEGFP 488 507 87423 [ 87 ] Yellow fluorescent proteins mito-YFP 513 527 56596 [ 88 ] mito-YPet 513 527 56637 * mito-mV enus 515 528 56619 * mito-mCitrine 516 529 56563 * Orange fluorescent proteins mito-mKO 548 561 57848 [ 88 ] mito-mKOet 548 561 57931 mito- mOrange2 549 565 57969 [ 89 ] mito-mKO2 551 565 57886 Red fluorescent proteins mito-tdTurboRFP 553 576 58062 * mito-tdTomato 554 581 58115 [ 90 ] mito-mT agRFP-T 555 584 58023 [ 91 ] mito-mT agRFP-T2 555 584 58041 * mito-DsRed2 558 583 55838 * mito-mRuby 558 605 55874 * mito-mRuby2 559 600 55905 [ 86 ] mito-mStrawberry 574 596 55941 * mito-mCherry 587 610 55102 [ 92 ] Far-red fluorescent proteins mito-HcRed1 588 618 55842 * mito-mPlum 590 649 55988 [ 91 ] mito- mRaspberry 598 625 55931 Infrared fluorescent protein mito-mIFP 683 704 56231 [ 93 ] Photo-reversible fluorescent proteins mito-iLOV ~ Photo-reversible fluorescent protein that outperforms eGFP 450 495 56519 * mito-Dronpa ~ Reversibly switchable photoactivatable fluorescent protein; switched off by 488nm; reversed by weak 405 nm light 503 518 57288 [ 94 ] Photo-convertible or photo-activatable tools for monitoring dynamics events mito-PAGFP ~ Fluorescence activated after illumination with 405 nm light. ..



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