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draft genome sequencing data  (Illumina Inc)


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    Structured Review

    Illumina Inc draft genome sequencing data
    Draft Genome Sequencing Data, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/draft+genome+sequence/miseq+platform/pm40228751-67-3-9
    Average 90 stars, based on 1 article reviews
    draft genome sequencing data - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    Sequencing:

    Article Title: Transcriptome reveals the role of ELONGATED HYPOCOTYL 5 in the regulation of glucosinolate metabolism in broccoli
    Article Snippet: .. Transcriptome sequencing, library construction, and data pre-processing were performed by Novogene Bioinformatics Technology Co. Ltd. RNA-seq libraries were constructed and sequenced on an Illumina NovaSeq 6000 platform using paired-end mode, with three biological replicates for each treatment. ..

    Article Title: The effect of multiple-enzyme treatment on in situ oral biofilm formation in healthy participants
    Article Snippet: The V3–V4 region of the bacterial 16S rRNA genes was amplified using primers Bac 341F and Bac 805R [ ] and prepared for amplicon sequencing according to Illumina's 16S Metagenomic Sequencing Library Preparation guide. .. Paired-end sequencing (2 × 300 bp) was performed on an in-house Illumina MiSeq sequencer using the V3 sequencing kit (Illumina, San Diego, CA, USA). ..

    Article Title: Nerve root magnetic stimulation regulates the synaptic plasticity of injured spinal cord by ascending sensory pathway
    Article Snippet: .. Finally, machine sequencing was carried out on an Novaseq 6000 (Illumina, San Diego, CA, USA). ..

    RNA Sequencing:

    Article Title: Transcriptome reveals the role of ELONGATED HYPOCOTYL 5 in the regulation of glucosinolate metabolism in broccoli
    Article Snippet: .. Transcriptome sequencing, library construction, and data pre-processing were performed by Novogene Bioinformatics Technology Co. Ltd. RNA-seq libraries were constructed and sequenced on an Illumina NovaSeq 6000 platform using paired-end mode, with three biological replicates for each treatment. ..

    Article Title: Recombinant production of amaranthin and other betalain variants with yeast cell factories
    Article Snippet: .. We obtained paired-end Illumina HiSeq 2500 transcriptomic RNA-seq raw reads of C . argentea var. cristata from NCBI (SRR9095475) and generated a fastq file using NCBI's SRAToolKits.2.10.4 fastq-dump tool. .. We used FastQC to do quality control and check the reads for overrepresented sequences [ ].

    Construct:

    Article Title: Transcriptome reveals the role of ELONGATED HYPOCOTYL 5 in the regulation of glucosinolate metabolism in broccoli
    Article Snippet: .. Transcriptome sequencing, library construction, and data pre-processing were performed by Novogene Bioinformatics Technology Co. Ltd. RNA-seq libraries were constructed and sequenced on an Illumina NovaSeq 6000 platform using paired-end mode, with three biological replicates for each treatment. ..

    Generated:

    Article Title: Oncogenic ALK fusion in rare subtype of small intestine metastasis from occult lung cancer.
    Article Snippet: .. The qualified DNA libraries w er e sequenced on n Illumina NovaSeq6000 platform (Illumina, San Diego, CA) and generated 150 bp paired-end reads. .. The base calls from the Illumina NovaSeq6000 was c onduct ed t o FASTQ files.

    Article Title: Recombinant production of amaranthin and other betalain variants with yeast cell factories
    Article Snippet: .. We obtained paired-end Illumina HiSeq 2500 transcriptomic RNA-seq raw reads of C . argentea var. cristata from NCBI (SRR9095475) and generated a fastq file using NCBI's SRAToolKits.2.10.4 fastq-dump tool. .. We used FastQC to do quality control and check the reads for overrepresented sequences [ ].

    other:

    Article Title: RNA diagnostics and therapeutics: a comprehensive review.
    Article Snippet: Following NGS sequencing of this sample of cDNA, often using Illumina short-read sequencing, millions of reads are generated, which are then aligned to a reference genome (UCSC Genome Browser) for further downstream analysis.

    Extraction:

    Article Title: Comparative genetic analysis of blood and semen samples in sperm donors from Hunan, China.
    Article Snippet: .. Peripheral blood and sperm samples were collected from semen donors. the tiaNamp Blood DNa Kit (tiaNGeN) was used to extract blood genomic DNa (gDNa), and the nucleic acid extraction or purification reagent (Basecare, china) was used to extract sperm DNa. the sureselect human all exon V6 (agilent) kit was used for liquid capture hybridization, elution and library amplification, and magnetic beads purification to obtain the whole exon library. the final library was sequenced at 150 bp in pair-ends by Novaseq 6000 (illumina) platform. ..

    Purification:

    Article Title: Comparative genetic analysis of blood and semen samples in sperm donors from Hunan, China.
    Article Snippet: .. Peripheral blood and sperm samples were collected from semen donors. the tiaNamp Blood DNa Kit (tiaNGeN) was used to extract blood genomic DNa (gDNa), and the nucleic acid extraction or purification reagent (Basecare, china) was used to extract sperm DNa. the sureselect human all exon V6 (agilent) kit was used for liquid capture hybridization, elution and library amplification, and magnetic beads purification to obtain the whole exon library. the final library was sequenced at 150 bp in pair-ends by Novaseq 6000 (illumina) platform. ..

    Hybridization:

    Article Title: Comparative genetic analysis of blood and semen samples in sperm donors from Hunan, China.
    Article Snippet: .. Peripheral blood and sperm samples were collected from semen donors. the tiaNamp Blood DNa Kit (tiaNGeN) was used to extract blood genomic DNa (gDNa), and the nucleic acid extraction or purification reagent (Basecare, china) was used to extract sperm DNa. the sureselect human all exon V6 (agilent) kit was used for liquid capture hybridization, elution and library amplification, and magnetic beads purification to obtain the whole exon library. the final library was sequenced at 150 bp in pair-ends by Novaseq 6000 (illumina) platform. ..

    Library Amplification:

    Article Title: Comparative genetic analysis of blood and semen samples in sperm donors from Hunan, China.
    Article Snippet: .. Peripheral blood and sperm samples were collected from semen donors. the tiaNamp Blood DNa Kit (tiaNGeN) was used to extract blood genomic DNa (gDNa), and the nucleic acid extraction or purification reagent (Basecare, china) was used to extract sperm DNa. the sureselect human all exon V6 (agilent) kit was used for liquid capture hybridization, elution and library amplification, and magnetic beads purification to obtain the whole exon library. the final library was sequenced at 150 bp in pair-ends by Novaseq 6000 (illumina) platform. ..

    Magnetic Beads:

    Article Title: Comparative genetic analysis of blood and semen samples in sperm donors from Hunan, China.
    Article Snippet: .. Peripheral blood and sperm samples were collected from semen donors. the tiaNamp Blood DNa Kit (tiaNGeN) was used to extract blood genomic DNa (gDNa), and the nucleic acid extraction or purification reagent (Basecare, china) was used to extract sperm DNa. the sureselect human all exon V6 (agilent) kit was used for liquid capture hybridization, elution and library amplification, and magnetic beads purification to obtain the whole exon library. the final library was sequenced at 150 bp in pair-ends by Novaseq 6000 (illumina) platform. ..



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