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fnirs system data processing software  (Shimadzu Corporation)


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    Structured Review

    Shimadzu Corporation fnirs system data processing software
    Fnirs System Data Processing Software, supplied by Shimadzu Corporation, used in various techniques. Bioz Stars score: 99/100, based on 7932 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/data+processing+fnirs+data/LabSolutions+Series/pmc12480887-151-8-14
    Average 99 stars, based on 7932 article reviews
    fnirs system data processing software - by Bioz Stars, 2026-10
    99/100 stars

    Images

    Related Articles

    Magnetic Resonance Imaging:

    Article Title: MRI, unilateral NMR, macro-vision histology, texture and biochemical dataset for studying the tomato during air drying
    Article Snippet: Type of data , Original MRI Image in dicom Processed MRI images in raw format Avizo project Temporal NMR transversal echo decay signal in text Macrovision images in tiff Tables in text, cvs and xlsx. .. Data collection , MRI images were acquired using 1.5T scanner (Avanto, Siemens) using the SoftwareSYNGO (Siemens, version VB17) for image acquisition. MRI image processing was realized using Avizo 3D Pro (version 2021.2, FEI Company), ImageJ (1.54 g, Wayne Rasband and contributors, National Institute of Health, USA), Matlab 2019a (MathWorks, USA) ans scilab 6.1.1 for image processing ; Unilateral NMR: Transversal signal decay were recorded using Carr Purcell Meiboom Gill (CPMG) pulse sequence on Mobile Universal Surface Explorer (MOUSE, Magritek, Germany) before being processed on Matlab 2022b (MathWorks, USA) Macro-vision: camera: Baumer VCXU31C (Baumer, sensor: Sony IMX252, Baumer SAS, France), macro imaging lens: VS technology 0513 (VS Technology Corporation, Japan), image acquisition: Baumer Camera Explorer (v3.5.2, Baumer SAS, France), image processing: FIJI (ImageJ v1.54 g, Wayne Rasband and contributors, National Institutes of Health, USA) Tissue texture: TA-plus Texture Analyzer (Lloyd Ametek, USA) controlled by Nexygen Plus software (v4.0.1.184, Lloyds Instruments, USA). Biochemical analyses: sugars and acids: absorbance measurement on SAFAS flx-Xenius XM spectrofluorimeter (SAFAS, Monaco), data acquisition on SP2000 software (v7.8.58.3, SAFAS, Monaco). Carotenoids and polyphenols: chromatography on HPLC-DAD Prominence system (Shimadzu, Japan), data acquisition and analysis on LabSolutions software (version 5.97 SP1, Shimadzu, Japan .. .. Data source location , Tomato plants were grown at UR PSH, INRAE, Avignon, France (Lat: 43.91549, Lon: 4.8794) MRI data were collected at UR OPAALE, INRAE, Rennes, France (Lat: 48.1282588; Lon: −1.7007542). Unilateral NMR data were collected at UR QuaPa, INRAE, Saint-Genès Champanelle, France (Lat: 45.7103958; Lon: 3.0146469) Macro-vision, texture and biochemical composition data were collected at UMR SQPOV, Avignon, France (Lat 43.916984, Lon 4.883684).

    Nuclear Magnetic Resonance:

    Article Title: MRI, unilateral NMR, macro-vision histology, texture and biochemical dataset for studying the tomato during air drying
    Article Snippet: Type of data , Original MRI Image in dicom Processed MRI images in raw format Avizo project Temporal NMR transversal echo decay signal in text Macrovision images in tiff Tables in text, cvs and xlsx. .. Data collection , MRI images were acquired using 1.5T scanner (Avanto, Siemens) using the SoftwareSYNGO (Siemens, version VB17) for image acquisition. MRI image processing was realized using Avizo 3D Pro (version 2021.2, FEI Company), ImageJ (1.54 g, Wayne Rasband and contributors, National Institute of Health, USA), Matlab 2019a (MathWorks, USA) ans scilab 6.1.1 for image processing ; Unilateral NMR: Transversal signal decay were recorded using Carr Purcell Meiboom Gill (CPMG) pulse sequence on Mobile Universal Surface Explorer (MOUSE, Magritek, Germany) before being processed on Matlab 2022b (MathWorks, USA) Macro-vision: camera: Baumer VCXU31C (Baumer, sensor: Sony IMX252, Baumer SAS, France), macro imaging lens: VS technology 0513 (VS Technology Corporation, Japan), image acquisition: Baumer Camera Explorer (v3.5.2, Baumer SAS, France), image processing: FIJI (ImageJ v1.54 g, Wayne Rasband and contributors, National Institutes of Health, USA) Tissue texture: TA-plus Texture Analyzer (Lloyd Ametek, USA) controlled by Nexygen Plus software (v4.0.1.184, Lloyds Instruments, USA). Biochemical analyses: sugars and acids: absorbance measurement on SAFAS flx-Xenius XM spectrofluorimeter (SAFAS, Monaco), data acquisition on SP2000 software (v7.8.58.3, SAFAS, Monaco). Carotenoids and polyphenols: chromatography on HPLC-DAD Prominence system (Shimadzu, Japan), data acquisition and analysis on LabSolutions software (version 5.97 SP1, Shimadzu, Japan .. .. Data source location , Tomato plants were grown at UR PSH, INRAE, Avignon, France (Lat: 43.91549, Lon: 4.8794) MRI data were collected at UR OPAALE, INRAE, Rennes, France (Lat: 48.1282588; Lon: −1.7007542). Unilateral NMR data were collected at UR QuaPa, INRAE, Saint-Genès Champanelle, France (Lat: 45.7103958; Lon: 3.0146469) Macro-vision, texture and biochemical composition data were collected at UMR SQPOV, Avignon, France (Lat 43.916984, Lon 4.883684).

    Sequencing:

    Article Title: MRI, unilateral NMR, macro-vision histology, texture and biochemical dataset for studying the tomato during air drying
    Article Snippet: Type of data , Original MRI Image in dicom Processed MRI images in raw format Avizo project Temporal NMR transversal echo decay signal in text Macrovision images in tiff Tables in text, cvs and xlsx. .. Data collection , MRI images were acquired using 1.5T scanner (Avanto, Siemens) using the SoftwareSYNGO (Siemens, version VB17) for image acquisition. MRI image processing was realized using Avizo 3D Pro (version 2021.2, FEI Company), ImageJ (1.54 g, Wayne Rasband and contributors, National Institute of Health, USA), Matlab 2019a (MathWorks, USA) ans scilab 6.1.1 for image processing ; Unilateral NMR: Transversal signal decay were recorded using Carr Purcell Meiboom Gill (CPMG) pulse sequence on Mobile Universal Surface Explorer (MOUSE, Magritek, Germany) before being processed on Matlab 2022b (MathWorks, USA) Macro-vision: camera: Baumer VCXU31C (Baumer, sensor: Sony IMX252, Baumer SAS, France), macro imaging lens: VS technology 0513 (VS Technology Corporation, Japan), image acquisition: Baumer Camera Explorer (v3.5.2, Baumer SAS, France), image processing: FIJI (ImageJ v1.54 g, Wayne Rasband and contributors, National Institutes of Health, USA) Tissue texture: TA-plus Texture Analyzer (Lloyd Ametek, USA) controlled by Nexygen Plus software (v4.0.1.184, Lloyds Instruments, USA). Biochemical analyses: sugars and acids: absorbance measurement on SAFAS flx-Xenius XM spectrofluorimeter (SAFAS, Monaco), data acquisition on SP2000 software (v7.8.58.3, SAFAS, Monaco). Carotenoids and polyphenols: chromatography on HPLC-DAD Prominence system (Shimadzu, Japan), data acquisition and analysis on LabSolutions software (version 5.97 SP1, Shimadzu, Japan .. .. Data source location , Tomato plants were grown at UR PSH, INRAE, Avignon, France (Lat: 43.91549, Lon: 4.8794) MRI data were collected at UR OPAALE, INRAE, Rennes, France (Lat: 48.1282588; Lon: −1.7007542). Unilateral NMR data were collected at UR QuaPa, INRAE, Saint-Genès Champanelle, France (Lat: 45.7103958; Lon: 3.0146469) Macro-vision, texture and biochemical composition data were collected at UMR SQPOV, Avignon, France (Lat 43.916984, Lon 4.883684).

    Imaging:

    Article Title: MRI, unilateral NMR, macro-vision histology, texture and biochemical dataset for studying the tomato during air drying
    Article Snippet: Type of data , Original MRI Image in dicom Processed MRI images in raw format Avizo project Temporal NMR transversal echo decay signal in text Macrovision images in tiff Tables in text, cvs and xlsx. .. Data collection , MRI images were acquired using 1.5T scanner (Avanto, Siemens) using the SoftwareSYNGO (Siemens, version VB17) for image acquisition. MRI image processing was realized using Avizo 3D Pro (version 2021.2, FEI Company), ImageJ (1.54 g, Wayne Rasband and contributors, National Institute of Health, USA), Matlab 2019a (MathWorks, USA) ans scilab 6.1.1 for image processing ; Unilateral NMR: Transversal signal decay were recorded using Carr Purcell Meiboom Gill (CPMG) pulse sequence on Mobile Universal Surface Explorer (MOUSE, Magritek, Germany) before being processed on Matlab 2022b (MathWorks, USA) Macro-vision: camera: Baumer VCXU31C (Baumer, sensor: Sony IMX252, Baumer SAS, France), macro imaging lens: VS technology 0513 (VS Technology Corporation, Japan), image acquisition: Baumer Camera Explorer (v3.5.2, Baumer SAS, France), image processing: FIJI (ImageJ v1.54 g, Wayne Rasband and contributors, National Institutes of Health, USA) Tissue texture: TA-plus Texture Analyzer (Lloyd Ametek, USA) controlled by Nexygen Plus software (v4.0.1.184, Lloyds Instruments, USA). Biochemical analyses: sugars and acids: absorbance measurement on SAFAS flx-Xenius XM spectrofluorimeter (SAFAS, Monaco), data acquisition on SP2000 software (v7.8.58.3, SAFAS, Monaco). Carotenoids and polyphenols: chromatography on HPLC-DAD Prominence system (Shimadzu, Japan), data acquisition and analysis on LabSolutions software (version 5.97 SP1, Shimadzu, Japan .. .. Data source location , Tomato plants were grown at UR PSH, INRAE, Avignon, France (Lat: 43.91549, Lon: 4.8794) MRI data were collected at UR OPAALE, INRAE, Rennes, France (Lat: 48.1282588; Lon: −1.7007542). Unilateral NMR data were collected at UR QuaPa, INRAE, Saint-Genès Champanelle, France (Lat: 45.7103958; Lon: 3.0146469) Macro-vision, texture and biochemical composition data were collected at UMR SQPOV, Avignon, France (Lat 43.916984, Lon 4.883684).

    Software:

    Article Title: MRI, unilateral NMR, macro-vision histology, texture and biochemical dataset for studying the tomato during air drying
    Article Snippet: Type of data , Original MRI Image in dicom Processed MRI images in raw format Avizo project Temporal NMR transversal echo decay signal in text Macrovision images in tiff Tables in text, cvs and xlsx. .. Data collection , MRI images were acquired using 1.5T scanner (Avanto, Siemens) using the SoftwareSYNGO (Siemens, version VB17) for image acquisition. MRI image processing was realized using Avizo 3D Pro (version 2021.2, FEI Company), ImageJ (1.54 g, Wayne Rasband and contributors, National Institute of Health, USA), Matlab 2019a (MathWorks, USA) ans scilab 6.1.1 for image processing ; Unilateral NMR: Transversal signal decay were recorded using Carr Purcell Meiboom Gill (CPMG) pulse sequence on Mobile Universal Surface Explorer (MOUSE, Magritek, Germany) before being processed on Matlab 2022b (MathWorks, USA) Macro-vision: camera: Baumer VCXU31C (Baumer, sensor: Sony IMX252, Baumer SAS, France), macro imaging lens: VS technology 0513 (VS Technology Corporation, Japan), image acquisition: Baumer Camera Explorer (v3.5.2, Baumer SAS, France), image processing: FIJI (ImageJ v1.54 g, Wayne Rasband and contributors, National Institutes of Health, USA) Tissue texture: TA-plus Texture Analyzer (Lloyd Ametek, USA) controlled by Nexygen Plus software (v4.0.1.184, Lloyds Instruments, USA). Biochemical analyses: sugars and acids: absorbance measurement on SAFAS flx-Xenius XM spectrofluorimeter (SAFAS, Monaco), data acquisition on SP2000 software (v7.8.58.3, SAFAS, Monaco). Carotenoids and polyphenols: chromatography on HPLC-DAD Prominence system (Shimadzu, Japan), data acquisition and analysis on LabSolutions software (version 5.97 SP1, Shimadzu, Japan .. .. Data source location , Tomato plants were grown at UR PSH, INRAE, Avignon, France (Lat: 43.91549, Lon: 4.8794) MRI data were collected at UR OPAALE, INRAE, Rennes, France (Lat: 48.1282588; Lon: −1.7007542). Unilateral NMR data were collected at UR QuaPa, INRAE, Saint-Genès Champanelle, France (Lat: 45.7103958; Lon: 3.0146469) Macro-vision, texture and biochemical composition data were collected at UMR SQPOV, Avignon, France (Lat 43.916984, Lon 4.883684).

    Article Title: Biodegradation of plasticizer benzyl butyl phthalate by Paenarthrobacter sp. strain M76 in liquid culture and soil microcosms.
    Article Snippet: Phthalate esters, a plasticizer widely used in various plastic-based consumer products, readily leach into the environment and later on, significantly threaten human health and ecosystems.. Among them, benzyl butyl phthalate (BBP), a significant environmental contaminant, is classified as a hazardous chemical due to its toxic effects on aquatic and terrestrial life forms.. In this study, we evaluated the biodegradation of BBP in batch culture and in soil microcosms using a Gram-positive bacterium, Paenarthrobacter sp. strain M76, isolated from a plastic waste dump yard in Puducherry, India.

    Article Title: Novel but stable endosymbionts have contrasting effects on aphid dispersal and plant feeding damage in the cereal pest Diuraphis noxia
    Article Snippet: Approximately 625 targets were collected using the Shimadzu Smart Metabolite Database, where each target comprised a quantifier MRM along with a qualifier MRM, which covers approximately 420 unique endogenous metabolites and multiple stable isotopically labelled internal standards. .. Resultant data was processed using Shimadzu LabSolutions Insight software, where peak integrations were visually validated and manually corrected where required. ..

    Article Title: Application of HepaRG mono- and HepaRG:THP-1 cocultures as immune responsive hepatotoxicity models.
    Article Snippet: .. Quantification was performed using LabSolutions software (Shimadzu). ..

    Chromatography:

    Article Title: MRI, unilateral NMR, macro-vision histology, texture and biochemical dataset for studying the tomato during air drying
    Article Snippet: Type of data , Original MRI Image in dicom Processed MRI images in raw format Avizo project Temporal NMR transversal echo decay signal in text Macrovision images in tiff Tables in text, cvs and xlsx. .. Data collection , MRI images were acquired using 1.5T scanner (Avanto, Siemens) using the SoftwareSYNGO (Siemens, version VB17) for image acquisition. MRI image processing was realized using Avizo 3D Pro (version 2021.2, FEI Company), ImageJ (1.54 g, Wayne Rasband and contributors, National Institute of Health, USA), Matlab 2019a (MathWorks, USA) ans scilab 6.1.1 for image processing ; Unilateral NMR: Transversal signal decay were recorded using Carr Purcell Meiboom Gill (CPMG) pulse sequence on Mobile Universal Surface Explorer (MOUSE, Magritek, Germany) before being processed on Matlab 2022b (MathWorks, USA) Macro-vision: camera: Baumer VCXU31C (Baumer, sensor: Sony IMX252, Baumer SAS, France), macro imaging lens: VS technology 0513 (VS Technology Corporation, Japan), image acquisition: Baumer Camera Explorer (v3.5.2, Baumer SAS, France), image processing: FIJI (ImageJ v1.54 g, Wayne Rasband and contributors, National Institutes of Health, USA) Tissue texture: TA-plus Texture Analyzer (Lloyd Ametek, USA) controlled by Nexygen Plus software (v4.0.1.184, Lloyds Instruments, USA). Biochemical analyses: sugars and acids: absorbance measurement on SAFAS flx-Xenius XM spectrofluorimeter (SAFAS, Monaco), data acquisition on SP2000 software (v7.8.58.3, SAFAS, Monaco). Carotenoids and polyphenols: chromatography on HPLC-DAD Prominence system (Shimadzu, Japan), data acquisition and analysis on LabSolutions software (version 5.97 SP1, Shimadzu, Japan .. .. Data source location , Tomato plants were grown at UR PSH, INRAE, Avignon, France (Lat: 43.91549, Lon: 4.8794) MRI data were collected at UR OPAALE, INRAE, Rennes, France (Lat: 48.1282588; Lon: −1.7007542). Unilateral NMR data were collected at UR QuaPa, INRAE, Saint-Genès Champanelle, France (Lat: 45.7103958; Lon: 3.0146469) Macro-vision, texture and biochemical composition data were collected at UMR SQPOV, Avignon, France (Lat 43.916984, Lon 4.883684).

    High Performance Liquid Chromatography:

    Article Title: MRI, unilateral NMR, macro-vision histology, texture and biochemical dataset for studying the tomato during air drying
    Article Snippet: Type of data , Original MRI Image in dicom Processed MRI images in raw format Avizo project Temporal NMR transversal echo decay signal in text Macrovision images in tiff Tables in text, cvs and xlsx. .. Data collection , MRI images were acquired using 1.5T scanner (Avanto, Siemens) using the SoftwareSYNGO (Siemens, version VB17) for image acquisition. MRI image processing was realized using Avizo 3D Pro (version 2021.2, FEI Company), ImageJ (1.54 g, Wayne Rasband and contributors, National Institute of Health, USA), Matlab 2019a (MathWorks, USA) ans scilab 6.1.1 for image processing ; Unilateral NMR: Transversal signal decay were recorded using Carr Purcell Meiboom Gill (CPMG) pulse sequence on Mobile Universal Surface Explorer (MOUSE, Magritek, Germany) before being processed on Matlab 2022b (MathWorks, USA) Macro-vision: camera: Baumer VCXU31C (Baumer, sensor: Sony IMX252, Baumer SAS, France), macro imaging lens: VS technology 0513 (VS Technology Corporation, Japan), image acquisition: Baumer Camera Explorer (v3.5.2, Baumer SAS, France), image processing: FIJI (ImageJ v1.54 g, Wayne Rasband and contributors, National Institutes of Health, USA) Tissue texture: TA-plus Texture Analyzer (Lloyd Ametek, USA) controlled by Nexygen Plus software (v4.0.1.184, Lloyds Instruments, USA). Biochemical analyses: sugars and acids: absorbance measurement on SAFAS flx-Xenius XM spectrofluorimeter (SAFAS, Monaco), data acquisition on SP2000 software (v7.8.58.3, SAFAS, Monaco). Carotenoids and polyphenols: chromatography on HPLC-DAD Prominence system (Shimadzu, Japan), data acquisition and analysis on LabSolutions software (version 5.97 SP1, Shimadzu, Japan .. .. Data source location , Tomato plants were grown at UR PSH, INRAE, Avignon, France (Lat: 43.91549, Lon: 4.8794) MRI data were collected at UR OPAALE, INRAE, Rennes, France (Lat: 48.1282588; Lon: −1.7007542). Unilateral NMR data were collected at UR QuaPa, INRAE, Saint-Genès Champanelle, France (Lat: 45.7103958; Lon: 3.0146469) Macro-vision, texture and biochemical composition data were collected at UMR SQPOV, Avignon, France (Lat 43.916984, Lon 4.883684).

    Article Title: Biodegradation of plasticizer benzyl butyl phthalate by Paenarthrobacter sp. strain M76 in liquid culture and soil microcosms.
    Article Snippet: Phthalate esters, a plasticizer widely used in various plastic-based consumer products, readily leach into the environment and later on, significantly threaten human health and ecosystems.. Among them, benzyl butyl phthalate (BBP), a significant environmental contaminant, is classified as a hazardous chemical due to its toxic effects on aquatic and terrestrial life forms.. In this study, we evaluated the biodegradation of BBP in batch culture and in soil microcosms using a Gram-positive bacterium, Paenarthrobacter sp. strain M76, isolated from a plastic waste dump yard in Puducherry, India.

    other:


    Article Title: Ulvan acts as a prebiotic polysaccharide enhancing the production of indoles and short-chain fatty acids in vitro: a metabolomics study.
    Article Snippet: Data analysis was performed on LabSolutions Insight (Shimadzu Corporation, Japan).

    Control:

    Article Title: Second-trimester multimetabolite panel for early preeclampsia rule-out.
    Article Snippet: .. Data processing, including quantification of metabolite concentrations, chromatographic peak integration, and quality control assessments, was performed using LabSolutions CL (Shimadzu) and LabSolutions Insight softwares (Shimadzu). ..



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    The <t>fNIRS</t> montage used in the experiment. ( A ) fNIRS channels (yellow label), LEDs (red), and detectors (magenta) onto a head model showing the coverage on the prefrontal areas. ( B ) LEDs (red), detectors (blue), and the fNIRS channels (green line) location on a standard 10–20 EEG system. Optode maps and figures were generated using <t>nirsLAB</t> <t>software.</t>
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    Image Search Results


    The fNIRS montage used in the experiment. ( A ) fNIRS channels (yellow label), LEDs (red), and detectors (magenta) onto a head model showing the coverage on the prefrontal areas. ( B ) LEDs (red), detectors (blue), and the fNIRS channels (green line) location on a standard 10–20 EEG system. Optode maps and figures were generated using nirsLAB software.

    Journal: Sensors (Basel, Switzerland)

    Article Title: The Validation of a Portable Functional NIRS System for Assessing Mental Workload

    doi: 10.3390/s21113810

    Figure Lengend Snippet: The fNIRS montage used in the experiment. ( A ) fNIRS channels (yellow label), LEDs (red), and detectors (magenta) onto a head model showing the coverage on the prefrontal areas. ( B ) LEDs (red), detectors (blue), and the fNIRS channels (green line) location on a standard 10–20 EEG system. Optode maps and figures were generated using nirsLAB software.

    Article Snippet: We processed the raw fNIRS data using a traditional fNIRS signal processing pipeline on our MATLAB-based fNIRS data processing software to retain the noise-free low-frequency fNIRS signal (0.01 and 0.2 Hz).

    Techniques: Generated, Software