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Lawrence Livermore National Security LLC cvode solver for stiff ode systems
Cvode Solver For Stiff Ode Systems, supplied by Lawrence Livermore National Security LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/cvode+ode-solver/cvode/pmc03309280-110-5-8
Average 90 stars, based on 1 article reviews
cvode solver for stiff ode systems - by Bioz Stars, 2026-10
90/100 stars

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Article Title: Note on the problem of considering the presence of wall in the modeling of chromatographic columns.
Article Snippet: The development of modern chromatography, in addition to improving and creating new experimental techniques, also includes the progress of precise and robust mathematical models and fast and reliable numerical methods enabling their solution.. Accurate mathematical models combined with effective numerical techniques enable prediction of the behavior of chromatographic columns in various operating conditions.. In a series of recent works Qamar et al. proposed a number of effective numerical solutions that provide profiles of concentrations and outlet temperatures also in non-isothermal conditions, requiring the application of a heat transport model in the chromatographic system modeling.

Article Title: Advanced modelling of adsorption process on activated carbon
Article Snippet: To gain a deeper insight into the adsorption kinetics mechanism, the adsorption of pchlorophenol (PCP) from water, cyclohexane, and heptane on surface chemistry modified activated carbons was modeled by the general rate (GR) differential mass transport model, which takes into account external and internal mass transfer resistance.. Due to the fact that the particles of AC are characterized by a wide particle size distribution (PSD) and pore diameter distribution (PDD), which are usually not considered for the simulation, our experimental dates were modeled with the GR model, in which PSD and PDD were included.. It was found that, for organic phases, mainly the slow surface adsorption–desorption process controls mass transfer.

Article Title: Nitromethane Decomposition via Automated Reaction Discovery and an Ab Initio Corrected Kinetic Model.
Article Snippet: 2018, 14 (4), 1865−1872. (73) Serban, R.; Hindmarsh, A. C. CVODES: An ODE solver with sensitivity analysis capabilities; Technical Report UCRL-JP-200039, Lawrence Livermore National Laboratory, 2003. (74) Hindmarsh, A. C.; Brown, P. N.; Grant, K. E.; Lee, S. L.; Serban, R.; Shumaker, D. E.; Woodward, C. S. SUNDIALS: Suite of nonlinear and differential/algebraic equation solvers.

Article Title: In vivo and in silico dynamics of the development of Metabolic Syndrome
Article Snippet: The ordinary differential equations were solved with compiled MEX files using numerical integrators from the SUNDIALS CVode package (2.6.0, Lawrence Livermore National Laboratory, Livermore, California) [5].

Article Title: Variable Time-stepping Exponential Integrators for Chemical Reactors with Analytical Jacobians
Article Snippet: The CVODE package from Lawrence Livermore National Laboratory is widely used for solving general systems of ODEs.

Article Title: Metabolic Modeling Combined With Machine Learning Integrates Longitudinal Data and Identifies the Origin of LXR-Induced Hepatic Steatosis
Article Snippet: The ordinary differential equations were solved with compiled MEX files using numerical integrators from the SUNDIALS CVode package (2.6.0, Lawrence Livermore National Laboratory, Livermore, California) (Hindmarsh et al., ).

Article Title: Modular dynamics paradigm in biosystems multilevel modeling: Software design and PBPK/PD validation.
Article Snippet: Objective: The development of mechanistic-based modeling and simulation (M&S) tools is essential for advancing our understanding of biological systems.. This study presents a novel M&S software tool, Cyborgs Simulator (CybSim), which employs a novel modular modeling paradigm on top of an acausal object-oriented modeling language (OOML)-defined architecture.. This paradigm avoids the imposition of hard links between biosystem components and the mechanisms that drive their dynamics, thus facilitating the evolution of the biological model with newly discovered mechanisms.

Biomarker Discovery:

Article Title: Model-Based Simulation of Maintenance Therapy of Childhood Acute Lymphoblastic Leukemia
Article Snippet: Pirana (Certara, Princeton, USA) was used for the generation of the visual predictive check with auto_bin option. .. The simulations in section out-of-sample validation and simulation study were performed with the ODE integrator CVodes (Sundials, Lawrence Livermore National Laboratory, Livermore) (Hindmarsh et al., ) interfaced to CasADi (Optimization in Engineering Center [OPTEC], K.U. ..



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