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AUTODOCK GmbH computer-based modeling program autodock vina
Computer Based Modeling Program Autodock Vina, supplied by AUTODOCK GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/computer+modeling+program/computer+based+modeling+program+autodock+vina/pm33376148-99-1-4
Average 90 stars, based on 1 article reviews
computer-based modeling program autodock vina - by Bioz Stars, 2026-09
90/100 stars

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Article Title: Saikosaponins regulate bile acid excretion in mice liver and ileum by activating farnesoid X receptor and bile acid transporter.
Article Snippet: Funding information Basic Application Project of Shanxi Province, Grant/Award Number: 20210302123432; National Natural Science Foundation of China, Grant/Award Number: 82174099; Shanxi “1331 Project” Key Collaborative Innovation Center; Shanxi Provincial Key Laboratory of Famous Jinyao Redevelopment; The Key Laboratory of Chemical Biology and Molecular Engineering of the Ministry of Education; The Key Laboratory of Effective Substances Research and Utilization in TCM of Shanxi Province, Grant/Award Number: 202105D121009 Abstract Radix Bupleuri exerts effective hepatoprotective and cholagogic effects through its Saikosaponins (SSs) component.. Therefore, we attempted to determine the mechanism of saikosaponins used to promote bile excretion by studying their effects on intrahepatic bile flow, focusing on the synthesis, transport, excretion, and metabolism of bile acids.. C57BL/6N mice were continuously gavaged with saikosaponin a (SSa), saikosaponin b2 (SSb2), or saikosaponin D (SSd) (200 mg/kg) for 14 days.

Article Title: The Hypoglycemic Effect of Berberine and Berberrubine Involves Modulation of Intestinal Farnesoid X Receptor Signaling Pathway and Inhibition of Hepatic Gluconeogenesis.
Article Snippet: A computer-based modeling program (Autodock vina) was employed to evaluate the binding of BBR and its metabolites with FXR.



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Image Search Results


Depiction of the mechanical rotation system. (A) Image of the connected motor outside the RF shielding. The drive rod connects to the motor and is passed directly through a waveguide to the coils. (B) A Fusion360 model of the coil pair within the magnet. The RF coils ( red and yellow ) rest on the bore tube ( green ), which positions the coils centrally and guides rotation. A three‐dimensional‐printed connection ( gray ) affixes the coils to the drive rod ( blue ) axially and houses their circuit boards.

Journal: Magnetic Resonance in Medicine

Article Title: Radial TRASE: 2D RF encoding through mechanical rotation and active digital decoupling

doi: 10.1002/mrm.70104

Figure Lengend Snippet: Depiction of the mechanical rotation system. (A) Image of the connected motor outside the RF shielding. The drive rod connects to the motor and is passed directly through a waveguide to the coils. (B) A Fusion360 model of the coil pair within the magnet. The RF coils ( red and yellow ) rest on the bore tube ( green ), which positions the coils centrally and guides rotation. A three‐dimensional‐printed connection ( gray ) affixes the coils to the drive rod ( blue ) axially and houses their circuit boards.

Article Snippet: Using the computer‐assisted modeling (CAM) program Fusion360 (Autodesk, California, USA), both coils were previously 3D‐printed with the optimized wire pattern modeled directly into their formers.

Techniques:

Demonstration of sequential slice Radial TRASE imaging. The pulse sequence for each slice consisted of 200‐μs hard pulses, echo train length of 128, echo time of 2000 μs, repetition time of 1000 ms, acquisition window of 1000 μs, four averages, and 201 radial spokes. A uniform B 0 coil within the magnet bore is used to shift the resonance slice due to the static axial gradient. Imaging was performed with a phantom containing nine 8‐mm‐diameter water vials. One vial is positioned centrally, with the remaining eight angled toward the center by 24°. (A) Sequential slice images were obtained for B 0 shift coil currents of −3, −1.5, 0, 1.5, and 3 A. The expected shift between each slice is 10.4 mm with a reconstructed partition thickness of 3.36 mm. From left to right, the ring of vials spreads outward, indicating successful shifting of the resonance slice position by the uniform B 0 coil. (B) Fusion360 model with a different perspective of the imaged vial phantom.

Journal: Magnetic Resonance in Medicine

Article Title: Radial TRASE: 2D RF encoding through mechanical rotation and active digital decoupling

doi: 10.1002/mrm.70104

Figure Lengend Snippet: Demonstration of sequential slice Radial TRASE imaging. The pulse sequence for each slice consisted of 200‐μs hard pulses, echo train length of 128, echo time of 2000 μs, repetition time of 1000 ms, acquisition window of 1000 μs, four averages, and 201 radial spokes. A uniform B 0 coil within the magnet bore is used to shift the resonance slice due to the static axial gradient. Imaging was performed with a phantom containing nine 8‐mm‐diameter water vials. One vial is positioned centrally, with the remaining eight angled toward the center by 24°. (A) Sequential slice images were obtained for B 0 shift coil currents of −3, −1.5, 0, 1.5, and 3 A. The expected shift between each slice is 10.4 mm with a reconstructed partition thickness of 3.36 mm. From left to right, the ring of vials spreads outward, indicating successful shifting of the resonance slice position by the uniform B 0 coil. (B) Fusion360 model with a different perspective of the imaged vial phantom.

Article Snippet: Using the computer‐assisted modeling (CAM) program Fusion360 (Autodesk, California, USA), both coils were previously 3D‐printed with the optimized wire pattern modeled directly into their formers.

Techniques: Imaging, Sequencing