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cellreporterxpress software  (Danaher Inc)


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    Structured Review

    Danaher Inc cellreporterxpress software
    Qualitative and quantitative analyses of HCMV AD169-GFP ΔUL53 virus reconstitution on the different recombinant HFF cell populations. HFFs that express pUL53, pUL53-Flag or pUL53::sHook1-Flag were transfected with the infectious bacterial artificial chromosome of HCMV ΔUL53. ( A ) Images of the GFP signals and the respective brightfield illuminations were taken at indicated time points; scale bar in panel A, picture 1 marks 500 μm. ( B ) Quantitative analysis of fluorescence-positive cells was achieved with automated counting by the <t>CellReporterXpress</t> ® software (Molecular Devices LLC, San Jose, CA, USA). Counting parameters for positive nuclei were set to an intensity of at least 100, a minimal width of 7 and a maximal width of 30. Measurements were performed in biological sextuplicates per cell population of 5.05% area of the well and mean values ± SD are given. ( C ) qPCR-based assay for the determination of viral genome equivalents referring to the respective recombinant HFF populations. Viral supernatants were harvested at day 24 p.t. and subjected to IE1-specific qPCR. Calculations were performed in biological sextuplicates per cell population; mean values ± SD are shown. ( B , C ) Statistical analysis was performed using an ordinary two-way ANOVA and post-hoc Tukey correction; ****, p < 0.0001; **, p < 0.01; *, p < 0.1; ns, not significant; no significant differences were noted for values between 1–20 d p.t. ( B ). ( D ) Wb-based expression analysis of the conditionally expressing HFF populations. Recombinant protein expression in the three HFF populations of HFF-UL53, HFF-UL53-Flag and HFF-UL53::sHook1-Flag cells was either uninduced (-) or induced (500 ng/mL Dox). Cells were either infected with HCMV ΔUL53 or remained mock-infected. At 24 h p.t., cells were harvested and lysed. Total lysate samples were subjected to standard Wb analysis using tag-specific or protein-specific monoclonal antibodies as indicated.
    Cellreporterxpress Software, supplied by Danaher Inc, used in various techniques. Bioz Stars score: 95/100, based on 115 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/computer+image+analysis+software/ImageXpress+Pico+System+with+CellReporterXpress+Automated+Image+Acquisition+and+Analysis+Software/pmc09776765-130-24-29
    Average 95 stars, based on 115 article reviews
    cellreporterxpress software - by Bioz Stars, 2026-10
    95/100 stars

    Images

    1) Product Images from "‘Shared-Hook’ and ‘Changed-Hook’ Binding Activities of Herpesviral Core Nuclear Egress Complexes Identified by Random Mutagenesis"

    Article Title: ‘Shared-Hook’ and ‘Changed-Hook’ Binding Activities of Herpesviral Core Nuclear Egress Complexes Identified by Random Mutagenesis

    Journal: Cells

    doi: 10.3390/cells11244030

    Qualitative and quantitative analyses of HCMV AD169-GFP ΔUL53 virus reconstitution on the different recombinant HFF cell populations. HFFs that express pUL53, pUL53-Flag or pUL53::sHook1-Flag were transfected with the infectious bacterial artificial chromosome of HCMV ΔUL53. ( A ) Images of the GFP signals and the respective brightfield illuminations were taken at indicated time points; scale bar in panel A, picture 1 marks 500 μm. ( B ) Quantitative analysis of fluorescence-positive cells was achieved with automated counting by the CellReporterXpress ® software (Molecular Devices LLC, San Jose, CA, USA). Counting parameters for positive nuclei were set to an intensity of at least 100, a minimal width of 7 and a maximal width of 30. Measurements were performed in biological sextuplicates per cell population of 5.05% area of the well and mean values ± SD are given. ( C ) qPCR-based assay for the determination of viral genome equivalents referring to the respective recombinant HFF populations. Viral supernatants were harvested at day 24 p.t. and subjected to IE1-specific qPCR. Calculations were performed in biological sextuplicates per cell population; mean values ± SD are shown. ( B , C ) Statistical analysis was performed using an ordinary two-way ANOVA and post-hoc Tukey correction; ****, p < 0.0001; **, p < 0.01; *, p < 0.1; ns, not significant; no significant differences were noted for values between 1–20 d p.t. ( B ). ( D ) Wb-based expression analysis of the conditionally expressing HFF populations. Recombinant protein expression in the three HFF populations of HFF-UL53, HFF-UL53-Flag and HFF-UL53::sHook1-Flag cells was either uninduced (-) or induced (500 ng/mL Dox). Cells were either infected with HCMV ΔUL53 or remained mock-infected. At 24 h p.t., cells were harvested and lysed. Total lysate samples were subjected to standard Wb analysis using tag-specific or protein-specific monoclonal antibodies as indicated.
    Figure Legend Snippet: Qualitative and quantitative analyses of HCMV AD169-GFP ΔUL53 virus reconstitution on the different recombinant HFF cell populations. HFFs that express pUL53, pUL53-Flag or pUL53::sHook1-Flag were transfected with the infectious bacterial artificial chromosome of HCMV ΔUL53. ( A ) Images of the GFP signals and the respective brightfield illuminations were taken at indicated time points; scale bar in panel A, picture 1 marks 500 μm. ( B ) Quantitative analysis of fluorescence-positive cells was achieved with automated counting by the CellReporterXpress ® software (Molecular Devices LLC, San Jose, CA, USA). Counting parameters for positive nuclei were set to an intensity of at least 100, a minimal width of 7 and a maximal width of 30. Measurements were performed in biological sextuplicates per cell population of 5.05% area of the well and mean values ± SD are given. ( C ) qPCR-based assay for the determination of viral genome equivalents referring to the respective recombinant HFF populations. Viral supernatants were harvested at day 24 p.t. and subjected to IE1-specific qPCR. Calculations were performed in biological sextuplicates per cell population; mean values ± SD are shown. ( B , C ) Statistical analysis was performed using an ordinary two-way ANOVA and post-hoc Tukey correction; ****, p < 0.0001; **, p < 0.01; *, p < 0.1; ns, not significant; no significant differences were noted for values between 1–20 d p.t. ( B ). ( D ) Wb-based expression analysis of the conditionally expressing HFF populations. Recombinant protein expression in the three HFF populations of HFF-UL53, HFF-UL53-Flag and HFF-UL53::sHook1-Flag cells was either uninduced (-) or induced (500 ng/mL Dox). Cells were either infected with HCMV ΔUL53 or remained mock-infected. At 24 h p.t., cells were harvested and lysed. Total lysate samples were subjected to standard Wb analysis using tag-specific or protein-specific monoclonal antibodies as indicated.

    Techniques Used: Virus, Recombinant, Transfection, Fluorescence, Software, Expressing, Infection, Bioprocessing

    Viral replication kinetics of HCMV ΔUL53 and its revertant (HCMV Rev) determined by quantitation of GFP-positive cells and HCMV-specific qPCR on the different recombinant HFF populations. 80,000 inducibly expressing HFFs in 24-well plates were infected with HCMV ΔUL53 or HCMV Rev at a viral dose of 5 × 10 6 genome copies. pUL53, pUL53-Flag or pUL53::sHook1-Flag protein expression was either Dox-induced (+Dox) or remained non-induced (−Dox). ( A ) The number of HCMV-infected cells was measured by detection of GFP signal-positive cells at indicated time points with the CellReporterXpress ® software using the ImageXpress ® Pico device. Values represent 25.04 % of the area of a well and are given as a mean value ± SD of two independently infected wells. ( B ) Viral supernatants were harvested at indicated time points and viral genome equivalents were determined by qPCR. Each value represents the mean ± SD of two independent biological replicates, each measured twice. ( A , B ) Statistical analysis was performed using an ordinary two-way ANOVA and post-hoc Sidak correction; ****, p < 0.0001; ***, p < 0.001; *, p < 0.1; ns, not significant; no significant differences were noted for values between 1–13 d p.i. ( A ) or 1–11 d p.i. ( B ), respectively.
    Figure Legend Snippet: Viral replication kinetics of HCMV ΔUL53 and its revertant (HCMV Rev) determined by quantitation of GFP-positive cells and HCMV-specific qPCR on the different recombinant HFF populations. 80,000 inducibly expressing HFFs in 24-well plates were infected with HCMV ΔUL53 or HCMV Rev at a viral dose of 5 × 10 6 genome copies. pUL53, pUL53-Flag or pUL53::sHook1-Flag protein expression was either Dox-induced (+Dox) or remained non-induced (−Dox). ( A ) The number of HCMV-infected cells was measured by detection of GFP signal-positive cells at indicated time points with the CellReporterXpress ® software using the ImageXpress ® Pico device. Values represent 25.04 % of the area of a well and are given as a mean value ± SD of two independently infected wells. ( B ) Viral supernatants were harvested at indicated time points and viral genome equivalents were determined by qPCR. Each value represents the mean ± SD of two independent biological replicates, each measured twice. ( A , B ) Statistical analysis was performed using an ordinary two-way ANOVA and post-hoc Sidak correction; ****, p < 0.0001; ***, p < 0.001; *, p < 0.1; ns, not significant; no significant differences were noted for values between 1–13 d p.i. ( A ) or 1–11 d p.i. ( B ), respectively.

    Techniques Used: Quantitation Assay, Recombinant, Expressing, Infection, Software

    Related Articles

    Fluorescence:

    Article Title: Multi-parametric profiling of IL-7-augmented GD2.CART products in a phase 1 clinical trial
    Article Snippet: .. Total area of GFP fluorescence for each condition was measured every 7 h using the ImageXpress Pico device (Molecular Devices) and total GFP area was quantified with CellReporterXpress software (Molecular Devices) with a 96-well clear bottom imaging plate (PhenoPlate # 6055302, Revvity). .. FSFC data were unmixed and corrected in the SpectroFlo software (v3.2.1; Cytek) and in FlowJo (v10.9.0; BD Biosciences).

    Article Title: Advancing Trypanosoma cruzi N-myristoyltransferase as a drug target for Chagas disease through in silico discovery and biochemical evaluation
    Article Snippet: Cells were treated with 2-fold dilutions ranging from 100 to 0.195 μM of each compound and incubated for 72 h. Following treatment, cell viability was assessed using Hoechst 33,342 (Thermo Fisher Scientific, Cat# H3570) and propidium iodide (PI; Thermo Fisher Scientific, Cat# P3566) staining. .. Fluorescence imaging was performed using the ImageXpress Pico system (Molecular Devices), and viable versus dead cell populations were quantified using CellReporterXpress software (Molecular Devices). .. IC 50 values were calculated using nonlinear regression analysis in GraphPad Prism (v9.5.0).

    Software:

    Article Title: Multi-parametric profiling of IL-7-augmented GD2.CART products in a phase 1 clinical trial
    Article Snippet: .. Total area of GFP fluorescence for each condition was measured every 7 h using the ImageXpress Pico device (Molecular Devices) and total GFP area was quantified with CellReporterXpress software (Molecular Devices) with a 96-well clear bottom imaging plate (PhenoPlate # 6055302, Revvity). .. FSFC data were unmixed and corrected in the SpectroFlo software (v3.2.1; Cytek) and in FlowJo (v10.9.0; BD Biosciences).

    Article Title: A young child formula with Limosilactobacillus reuteri and GOS modulates gut microbiome and enhances bone and muscle development: a randomized trial.
    Article Snippet: The next day, the cells were washed and stained with Hoechst 33342 (Sigma) and secondary antibodies coupled with fluorescent molecules (ThermoFisher Scientific). .. Image acquisition was performed with ImageXpress Micro confocal microscope (Molecular devices) and image analysis was performed with MetaXpress Software to quantify the myotube area and/or cell fusion index (myogenesis). .. In vitro experiments with osteoblast MC3T3‐E1 subclone 4 culture and treatments conditions The pre-osteoblastic cell line MC3T3-E1 subclone 4 (CRL-2593) was purchased from ATCC (Manassas; Virginia, USA).

    Article Title: Differential effects of KRAS G-domain and hypervariable region mutants on cancer phenotypes.
    Article Snippet: .. The nuclei were then counterstained with 50 μg/ml Hoechst 33,342 solution for another 30 min prior to image acquisition using the ImageXpress® Pico Automated Cell Imaging System together with the CellReporterXpress Image Acquisition and Analysis Software (Molecular Devices; San Jose, CA, USA). ..

    Article Title: Advancing Trypanosoma cruzi N-myristoyltransferase as a drug target for Chagas disease through in silico discovery and biochemical evaluation
    Article Snippet: Cells were treated with 2-fold dilutions ranging from 100 to 0.195 μM of each compound and incubated for 72 h. Following treatment, cell viability was assessed using Hoechst 33,342 (Thermo Fisher Scientific, Cat# H3570) and propidium iodide (PI; Thermo Fisher Scientific, Cat# P3566) staining. .. Fluorescence imaging was performed using the ImageXpress Pico system (Molecular Devices), and viable versus dead cell populations were quantified using CellReporterXpress software (Molecular Devices). .. IC 50 values were calculated using nonlinear regression analysis in GraphPad Prism (v9.5.0).

    Article Title: Image cytometry-based quantification protocol of human pulmonary arterial endothelial cells in lab-fabricated multichannel microfluidic devices
    Article Snippet: GraphPad Prism (version 10.2.3) , Dotmatics, MA, USA , N/A. .. CellReporterXpress Image Acquisition and Analysis Software, version 2.5 , Molecular Devices , N/A. .. Leica Application Suite X (LAS X), version 5.3.0. , Leica Microsystems , N/A.

    Article Title: Modelling EWS::FLI1 protein fluctuations reveal determinants of tumor plasticity in Ewing sarcoma
    Article Snippet: Zeiss Zen 2.3 Lite , Zeiss , RRID:SCR_023747. .. CellReporterXpress Automated Image Acquisition and Analysis Software , Molecular Devices , RRID:SCR_025681. ..

    Article Title: Bemnifosbuvir and remdesivir inhibit tick-borne encephalitis virus infection in complementary in vitro and ex vivo disease models
    Article Snippet: .. Fluorescent signal detection and image analysis were carried out using the ImageXpress Pico automated imaging system in combination with CellReporterXpress software (Molecular Devices). ..

    Imaging:

    Article Title: Multi-parametric profiling of IL-7-augmented GD2.CART products in a phase 1 clinical trial
    Article Snippet: .. Total area of GFP fluorescence for each condition was measured every 7 h using the ImageXpress Pico device (Molecular Devices) and total GFP area was quantified with CellReporterXpress software (Molecular Devices) with a 96-well clear bottom imaging plate (PhenoPlate # 6055302, Revvity). .. FSFC data were unmixed and corrected in the SpectroFlo software (v3.2.1; Cytek) and in FlowJo (v10.9.0; BD Biosciences).

    Article Title: Differential effects of KRAS G-domain and hypervariable region mutants on cancer phenotypes.
    Article Snippet: .. The nuclei were then counterstained with 50 μg/ml Hoechst 33,342 solution for another 30 min prior to image acquisition using the ImageXpress® Pico Automated Cell Imaging System together with the CellReporterXpress Image Acquisition and Analysis Software (Molecular Devices; San Jose, CA, USA). ..

    Article Title: Advancing Trypanosoma cruzi N-myristoyltransferase as a drug target for Chagas disease through in silico discovery and biochemical evaluation
    Article Snippet: Cells were treated with 2-fold dilutions ranging from 100 to 0.195 μM of each compound and incubated for 72 h. Following treatment, cell viability was assessed using Hoechst 33,342 (Thermo Fisher Scientific, Cat# H3570) and propidium iodide (PI; Thermo Fisher Scientific, Cat# P3566) staining. .. Fluorescence imaging was performed using the ImageXpress Pico system (Molecular Devices), and viable versus dead cell populations were quantified using CellReporterXpress software (Molecular Devices). .. IC 50 values were calculated using nonlinear regression analysis in GraphPad Prism (v9.5.0).

    Article Title: Bemnifosbuvir and remdesivir inhibit tick-borne encephalitis virus infection in complementary in vitro and ex vivo disease models
    Article Snippet: .. Fluorescent signal detection and image analysis were carried out using the ImageXpress Pico automated imaging system in combination with CellReporterXpress software (Molecular Devices). ..

    Microscopy:

    Article Title: A young child formula with Limosilactobacillus reuteri and GOS modulates gut microbiome and enhances bone and muscle development: a randomized trial.
    Article Snippet: The next day, the cells were washed and stained with Hoechst 33342 (Sigma) and secondary antibodies coupled with fluorescent molecules (ThermoFisher Scientific). .. Image acquisition was performed with ImageXpress Micro confocal microscope (Molecular devices) and image analysis was performed with MetaXpress Software to quantify the myotube area and/or cell fusion index (myogenesis). .. In vitro experiments with osteoblast MC3T3‐E1 subclone 4 culture and treatments conditions The pre-osteoblastic cell line MC3T3-E1 subclone 4 (CRL-2593) was purchased from ATCC (Manassas; Virginia, USA).



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    Image Search Results


    Effect of stefin B and cystatin C deficiency on proliferation and cell death. ( A ) Cell proliferation in primary tumors was determined through immunodetection of Ki67 in PyMT;WT and PyMT;DKO mice at 14 weeks of age. Representative images and quantification of Ki67-positive cells as a percentage of total cells in PyMT;WT (n = 11) and PyMT;DKO (n = 10) tumors. Ki67 index was calculated from 10 high-power fields per tumor using computer-assisted data analysis in ImageJ. Differences were analyzed using Student’s t -test. ( B ) Cell death in primary tumors from PyMT;WT and PyMT;DKO mice at 14 weeks of age was determined through TUNEL assays. Representative images and quantification of TUNEL-positive cells as a percentage of total cells in PyMT;WT (n = 9) and PyMT;DKO (n = 8) tumors. The TUNEL+ index was calculated from 10 high-power fields per tumor using computer-assisted data analysis in ImageJ. Differences were analyzed using Student’s t -test.

    Journal: Cells

    Article Title: Stefin B and Cystatin C Deficiency Suppresses Tumor Growth and Alters Tumor Microenvironment in a Breast Cancer Model

    doi: 10.3390/cells15040360

    Figure Lengend Snippet: Effect of stefin B and cystatin C deficiency on proliferation and cell death. ( A ) Cell proliferation in primary tumors was determined through immunodetection of Ki67 in PyMT;WT and PyMT;DKO mice at 14 weeks of age. Representative images and quantification of Ki67-positive cells as a percentage of total cells in PyMT;WT (n = 11) and PyMT;DKO (n = 10) tumors. Ki67 index was calculated from 10 high-power fields per tumor using computer-assisted data analysis in ImageJ. Differences were analyzed using Student’s t -test. ( B ) Cell death in primary tumors from PyMT;WT and PyMT;DKO mice at 14 weeks of age was determined through TUNEL assays. Representative images and quantification of TUNEL-positive cells as a percentage of total cells in PyMT;WT (n = 9) and PyMT;DKO (n = 8) tumors. The TUNEL+ index was calculated from 10 high-power fields per tumor using computer-assisted data analysis in ImageJ. Differences were analyzed using Student’s t -test.

    Article Snippet: The average size of metastases was quantified using computer-assisted analysis with CellSens Imaging software (Version 1.17; Olympus, Tokyo, Japan).

    Techniques: Immunodetection, TUNEL Assay