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computer code data collection nucleotide sequene data  (Azenta)

 
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    Azenta computer code data collection nucleotide sequene data
    Computer Code Data Collection Nucleotide Sequene Data, supplied by Azenta, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/computer+code+data+collection+illumina+sequencing+platform/code+collection+computer+data+data+nucleotide+sequene/pm35918425-384-8-22
    Average 86 stars, based on 1 article reviews
    computer code data collection nucleotide sequene data - by Bioz Stars, 2026-11
    86/100 stars

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    Related Articles

    Software:

    Article Title: Viral biogeography of the mammalian gut and parenchymal organs.
    Article Snippet: .. Software and code Policy information about availability of computer code Data collection Nucleotide sequene data was generated by an external sequencing provider (GENEWIZ) using Illumina NovaSeq 6000 platform. .. Data analysis The following open source programs were used in this study: Cutadapt v2.4, Trimmomatic v0.36, Kraken v1.1.1, ViromeQC pipeline, SPAdes v3.13.0, MEGAHIT v1.2.1-beta, BLASTn v2.10.0+, VirSorter2 pipeline, CheckV pipeline, HMMER v3.1b2, Demovir script for bash, vConTACT2 pipeline, BACPHLIP pipeline, PILER-CR v1.06, Bowtie2 v2.3.4.1, SAMTools v1.7, USEARCH v8.1, RDP Classifier v2.12, R environment v4.1.0, ggplot2 v3.3.3, gplots v3.1.1, igraph v1.2.6, networkD3 v0.4, Vegan v2.5-7, ANCOM-II script for R, custom R scripts available from https:// doi.org/10.6084/m9.figshare.15149247.v1 For manuscripts utilizing custom algorithms or software that are central to the research but not yet described in published literature, software must be made available to editors and reviewers.

    Generated:

    Article Title: Viral biogeography of the mammalian gut and parenchymal organs.
    Article Snippet: .. Software and code Policy information about availability of computer code Data collection Nucleotide sequene data was generated by an external sequencing provider (GENEWIZ) using Illumina NovaSeq 6000 platform. .. Data analysis The following open source programs were used in this study: Cutadapt v2.4, Trimmomatic v0.36, Kraken v1.1.1, ViromeQC pipeline, SPAdes v3.13.0, MEGAHIT v1.2.1-beta, BLASTn v2.10.0+, VirSorter2 pipeline, CheckV pipeline, HMMER v3.1b2, Demovir script for bash, vConTACT2 pipeline, BACPHLIP pipeline, PILER-CR v1.06, Bowtie2 v2.3.4.1, SAMTools v1.7, USEARCH v8.1, RDP Classifier v2.12, R environment v4.1.0, ggplot2 v3.3.3, gplots v3.1.1, igraph v1.2.6, networkD3 v0.4, Vegan v2.5-7, ANCOM-II script for R, custom R scripts available from https:// doi.org/10.6084/m9.figshare.15149247.v1 For manuscripts utilizing custom algorithms or software that are central to the research but not yet described in published literature, software must be made available to editors and reviewers.

    Sequencing:

    Article Title: Viral biogeography of the mammalian gut and parenchymal organs.
    Article Snippet: .. Software and code Policy information about availability of computer code Data collection Nucleotide sequene data was generated by an external sequencing provider (GENEWIZ) using Illumina NovaSeq 6000 platform. .. Data analysis The following open source programs were used in this study: Cutadapt v2.4, Trimmomatic v0.36, Kraken v1.1.1, ViromeQC pipeline, SPAdes v3.13.0, MEGAHIT v1.2.1-beta, BLASTn v2.10.0+, VirSorter2 pipeline, CheckV pipeline, HMMER v3.1b2, Demovir script for bash, vConTACT2 pipeline, BACPHLIP pipeline, PILER-CR v1.06, Bowtie2 v2.3.4.1, SAMTools v1.7, USEARCH v8.1, RDP Classifier v2.12, R environment v4.1.0, ggplot2 v3.3.3, gplots v3.1.1, igraph v1.2.6, networkD3 v0.4, Vegan v2.5-7, ANCOM-II script for R, custom R scripts available from https:// doi.org/10.6084/m9.figshare.15149247.v1 For manuscripts utilizing custom algorithms or software that are central to the research but not yet described in published literature, software must be made available to editors and reviewers.



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    Illumina Inc computer code data collection illumina sequencing platform
    Computer Code Data Collection Illumina Sequencing Platform, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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