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picard's markduplicates command-line tool  (Illumina Inc)


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    Illumina Inc picard's markduplicates command-line tool
    Picard's Markduplicates Command Line Tool, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/command+line+tool+markduplicates/markduplicates+tool/pmc03202289-286-9-2
    Average 90 stars, based on 1 article reviews
    picard's markduplicates command-line tool - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    other:

    Article Title: A powerful and flexible statistical framework for testing hypotheses of allele-specific gene expression from RNA-seq data
    Article Snippet: For our Illumina single-end and paired-end data, we used Picard's MarkDuplicates command-line tool ( http://picard.sourceforge.net/ ).

    Article Title: Reciprocal cybrids reveal how organellar genomes affect plant phenotypes.
    Article Snippet: Duplicate read pairs were marked using the MarkDuplicates tool of the GATK suite (v.4.0.2.1), using an optical duplicate pixel distance of 100 as recommended in the documentation of GATK when working with data from unpatterned Illumina flowcells.

    Article Title: Comparison of Sequencing Platforms for Single Nucleotide Variant Calls in a Human Sample
    Article Snippet: We used the MarkDuplicates tool offered as part of the Picard command-line suite ( http://picard.sourceforge.net ) to mark the duplicate reads in the Illumina and SOLiD datasets.

    Article Title: Comparison of sequencing platforms for single nucleotide variant calls in a human sample.
    Article Snippet: Removal of Duplicate Reads We used the MarkDuplicates tool offered as part of the Picard command-line suite (http://picard.sourceforge.net) to mark the duplicate reads in the Illumina and SOLiD datasets.



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