Review




Structured Review

GENETYX CORPORATION software v14
Alignment of the amino acid sequences of the nsp2 gene from divergent porcine reproductive and respiratory syndrome virus (PRRSV) strains. Genetic analysis was conducted using CLUSTAL W with Genetyx Software <t>v14</t> (Genetyx, Tokyo, Japan). The black boxes indicate complete amino acid conservation (4/4), whereas gray and unshaded boxes identify less conserved residues (3/4 or less). A signal peptide was predicted using the Genetyx Software v14 (Genetyx, Tokyo, Japan) (yellow-boxed region). The completely conserved putative cysteine–protease catalytic residues are identified by the red-boxed amino acids to signify protease sequence conservation within PRRSV and equine arteritis virus. The potential N -glycosylation sites indicated by asterisks (*) were identified by PROSITE . The conserved cysteine residue that is proposed to interact with the M protein is denoted by the downward arrow (↓)
Software V14, supplied by GENETYX CORPORATION, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/clustalw+analysis+program/v14+software/pmc08042467-44-10-11
Average 90 stars, based on 1 article reviews
software v14 - by Bioz Stars, 2026-11
90/100 stars

Images

1) Product Images from "Immunity against a Japanese local strain of porcine reproductive and respiratory syndrome virus decreases viremia and symptoms of a highly pathogenic strain"

Article Title: Immunity against a Japanese local strain of porcine reproductive and respiratory syndrome virus decreases viremia and symptoms of a highly pathogenic strain

Journal: BMC Veterinary Research

doi: 10.1186/s12917-021-02863-4

Alignment of the amino acid sequences of the nsp2 gene from divergent porcine reproductive and respiratory syndrome virus (PRRSV) strains. Genetic analysis was conducted using CLUSTAL W with Genetyx Software v14 (Genetyx, Tokyo, Japan). The black boxes indicate complete amino acid conservation (4/4), whereas gray and unshaded boxes identify less conserved residues (3/4 or less). A signal peptide was predicted using the Genetyx Software v14 (Genetyx, Tokyo, Japan) (yellow-boxed region). The completely conserved putative cysteine–protease catalytic residues are identified by the red-boxed amino acids to signify protease sequence conservation within PRRSV and equine arteritis virus. The potential N -glycosylation sites indicated by asterisks (*) were identified by PROSITE . The conserved cysteine residue that is proposed to interact with the M protein is denoted by the downward arrow (↓)
Figure Legend Snippet: Alignment of the amino acid sequences of the nsp2 gene from divergent porcine reproductive and respiratory syndrome virus (PRRSV) strains. Genetic analysis was conducted using CLUSTAL W with Genetyx Software v14 (Genetyx, Tokyo, Japan). The black boxes indicate complete amino acid conservation (4/4), whereas gray and unshaded boxes identify less conserved residues (3/4 or less). A signal peptide was predicted using the Genetyx Software v14 (Genetyx, Tokyo, Japan) (yellow-boxed region). The completely conserved putative cysteine–protease catalytic residues are identified by the red-boxed amino acids to signify protease sequence conservation within PRRSV and equine arteritis virus. The potential N -glycosylation sites indicated by asterisks (*) were identified by PROSITE . The conserved cysteine residue that is proposed to interact with the M protein is denoted by the downward arrow (↓)

Techniques Used: Software, Sequencing

Related Articles

Sequencing:

Article Title: Development and Evaluation of a Rapid, Specific, and Sensitive Loop-mediated Isothermal Amplification Assay to Detect Tenacibaculum sp. Strain Pbs-1 Associated with Black-spot Shell Disease in Akoya Pearl Oysters
Article Snippet: Insert-containing plasmids were puri ed using the PureYield Plasmid Miniprep System (Promega), ampli ed using M13 f and M13 r universal primers, then sequenced using a BigDye Terminator v3.1 Cycle Sequencing Kit (Applied Biosystems, Foster City, CA, USA) and an ABI Prism 3130xl Genetic Analyzer (Applied Biosystems). .. Multiple sequence alignment was performed using Genetyx v14 software (Genetyx, Tokyo, Japan). ..

Software:

Article Title: Development and Evaluation of a Rapid, Specific, and Sensitive Loop-mediated Isothermal Amplification Assay to Detect Tenacibaculum sp. Strain Pbs-1 Associated with Black-spot Shell Disease in Akoya Pearl Oysters
Article Snippet: Insert-containing plasmids were puri ed using the PureYield Plasmid Miniprep System (Promega), ampli ed using M13 f and M13 r universal primers, then sequenced using a BigDye Terminator v3.1 Cycle Sequencing Kit (Applied Biosystems, Foster City, CA, USA) and an ABI Prism 3130xl Genetic Analyzer (Applied Biosystems). .. Multiple sequence alignment was performed using Genetyx v14 software (Genetyx, Tokyo, Japan). ..



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