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Bioedit Company clustal w function
Clustal W Function, supplied by Bioedit Company, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/clustal+w+function/clustalw+function/pmc10868237-37-31-35
Average 90 stars, based on 1 article reviews
clustal w function - by Bioz Stars, 2026-11
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Related Articles

Marker:

Article Title: DNA barcoding and anti-tyrosinase activities of three species-representative populations of the genus Greyia Hook & Harv
Article Snippet: .. Each individual marker was aligned using the ClustalW functionality embedded in BioEdit v7.2.3 (Hall, 1999), with subsequent manual alignment. ..

Sequencing:

Article Title: Heterologous investigation of metabotropic and ionotropic odorant receptors in ab3A neurons of Drosophila melanogaster
Article Snippet: .. To identify transmembrane domains, a preliminary polypeptide sequence alignment was performed using the ClustalW function of BioEdit ( ). ..

Article Title: The complete mitochondrial genome of the bait worm, Marphysa victori (Annelida; Polychaeta; Eunicida; Eunicidae)
Article Snippet: .. A nucleotide sequence matrix including the complete mitogenome sequences of 12 polychaete species retrieved from GenBank ( http://www.ncbi.nlm.nih.gov/ ) and that of M. victori in this study were aligned using the Clustal W function in BioEdit 7.2.5 ( ) to determine the gene boundaries of protein-coding genes (PCGs) and ribosomal RNA genes. ..

Software:

Article Title: Morphological and Biochemical Changes in the Mediterranean Cereal Cyst Nematode ( Heterodera latipons ) during Diapause.
Article Snippet: .. Multiple alignments were performed for trehalase of H. latipons and homologous proteins from different nematodes using ClustalW function available in BioEdit version 7.0.5.3 software. ..

other:

Article Title: Molecular basis for the effects of SSRIs in non-target aquatic invertebrates: A case study with Mytilus galloprovincialis early larvae.
Article Snippet: Selective Serotonin Reuptake Inhibitors (SSRIs) are among the most prescribed antidepressants, whose increasing consumption results in a continuous discharge into aquatic compartments, where they are detected at ng-μg/L levels.. Whilst designed to modulate endogenous levels of circulating Serotonin (5-HT) in humans by selectively interfering with serotonin reuptake transporters (SERTs), SSRIs have been shown to induce a variety of adverse effects in non-target species, including aquatic invertebrates.. In bivalve molluscs, adult exposure to environmental concentrations of SSRIs results in tissue bioaccumulation and induces different biomarker responses.



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The feature of selected VNARs ( a ) The characterization of selected clone from each pool. n.d. = not detected. ( b ) VNAR amino acid sequence of selected clone. Complementarity determining region 1 (CDR1), Hyper variable region 2 (HV2), HV4 and CDR3 are expressed under the sequences. The sequences were expressed by using BioEdit version 7.2.5. Cysteine residues are highlighted in yellow. Positively charged amino acids, negatively charged amino acids, and hydrophobic amino acids in CDR3 are shown in red, green, and blue, respectively. ( c ) Sodium dodecyl-sulfate polyacrylamide gel electrophoresis (SDS-PAGE) of the selected clones under non-reducing condition. M: Protein Marker.
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The feature of selected VNARs ( a ) The characterization of selected clone from each pool. n.d. = not detected. ( b ) VNAR amino acid sequence of selected clone. Complementarity determining region 1 (CDR1), Hyper variable region 2 (HV2), HV4 and CDR3 are expressed under the sequences. The sequences were expressed by using BioEdit version 7.2.5. Cysteine residues are highlighted in yellow. Positively charged amino acids, negatively charged amino acids, and hydrophobic amino acids in CDR3 are shown in red, green, and blue, respectively. ( c ) Sodium dodecyl-sulfate polyacrylamide gel electrophoresis (SDS-PAGE) of the selected clones under non-reducing condition. M: Protein Marker.
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The feature of selected VNARs ( a ) The characterization of selected clone from each pool. n.d. = not detected. ( b ) VNAR amino acid sequence of selected clone. Complementarity determining region 1 (CDR1), Hyper variable region 2 (HV2), HV4 and CDR3 are expressed under the sequences. The sequences were expressed by using BioEdit version 7.2.5. Cysteine residues are highlighted in yellow. Positively charged amino acids, negatively charged amino acids, and hydrophobic amino acids in CDR3 are shown in red, green, and blue, respectively. ( c ) Sodium dodecyl-sulfate polyacrylamide gel electrophoresis (SDS-PAGE) of the selected clones under non-reducing condition. M: Protein Marker.
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The feature of selected VNARs ( a ) The characterization of selected clone from each pool. n.d. = not detected. ( b ) VNAR amino acid sequence of selected clone. Complementarity determining region 1 (CDR1), Hyper variable region 2 (HV2), HV4 and CDR3 are expressed under the sequences. The sequences were expressed by using BioEdit version 7.2.5. Cysteine residues are highlighted in yellow. Positively charged amino acids, negatively charged amino acids, and hydrophobic amino acids in CDR3 are shown in red, green, and blue, respectively. ( c ) Sodium dodecyl-sulfate polyacrylamide gel electrophoresis (SDS-PAGE) of the selected clones under non-reducing condition. M: Protein Marker.

Journal: Marine Drugs

Article Title: Novel Approach for Obtaining Variable Domain of New Antigen Receptor with Different Physicochemical Properties from Japanese Topeshark ( Hemitriakis japanica )

doi: 10.3390/md21110550

Figure Lengend Snippet: The feature of selected VNARs ( a ) The characterization of selected clone from each pool. n.d. = not detected. ( b ) VNAR amino acid sequence of selected clone. Complementarity determining region 1 (CDR1), Hyper variable region 2 (HV2), HV4 and CDR3 are expressed under the sequences. The sequences were expressed by using BioEdit version 7.2.5. Cysteine residues are highlighted in yellow. Positively charged amino acids, negatively charged amino acids, and hydrophobic amino acids in CDR3 are shown in red, green, and blue, respectively. ( c ) Sodium dodecyl-sulfate polyacrylamide gel electrophoresis (SDS-PAGE) of the selected clones under non-reducing condition. M: Protein Marker.

Article Snippet: CDR3 sequence comparison figures were created using the alignment function (Clustal W [ ]) in BioEdit version 7.2.5 (Bioedit, Manchester, UK).

Techniques: Sequencing, Polyacrylamide Gel Electrophoresis, SDS Page, Clone Assay, Marker