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Biomatters Ltd clustal omega v1 2 2 algorithm
Clustal Omega V1 2 2 Algorithm, supplied by Biomatters Ltd, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/clustal+omega+algorithm/1+2+2+clustal+omega/pm40731989-89-7-17
Average 86 stars, based on 1 article reviews
clustal omega v1 2 2 algorithm - by Bioz Stars, 2026-10
86/100 stars

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Sequencing:

Article Title: Morrittospora corbiculae n. gen. n. sp., a microsporidian parasite infecting the invasive Asian clam Corbicula fluminea from the River Thames, London.
Article Snippet: .. Sequence chromatograms were edited in Geneious v 2022.1.1 (Biomatters, New Zealand) to remove low quality bases and primer sequences before aligning against full SSU rRNA sequences for microsporidia including representative sequences for all clades (including environmental-only clades) using MAFFT v7 (Katoh et al., 2019). ..

Article Title: Relative performance of three phylogenetic methods based on complete mitochondrial genomes of barnacle
Article Snippet: .. One consisted of the concatenated nucleotide sequences of the 13 PCGs, and the other consisted solely of the COX1 marker region (LCO1490/HCO2198; 658 bp), as described by Folmer et al. . For both datasets, sequence alignment was performed using CLUSTAL Omega in Geneious Prime software (version 2025.0; Biomatters, Auckland, New Zealand). ..

Article Title: A pendant awn phenotype linked to the EMBRYONIC FLOWER 1 LIKE (EMF1L) gene in barley.
Article Snippet: .. Pairwise sequence identity values were calculated based on multiple sequence alignments of genomic and polypeptide sequences using Clustal Omega 1.2.2 on Geneious Prime version 2023.1.2 (Biomatters Ltd., New Zealand). ..

Article Title: Genetic Optimization of Early 2009 Pandemic H1N1 Vaccine Strains for Improved Replication in Embryonated Chicken Eggs.
Article Snippet: .. Multiple sequence alignments were generated with Clustal Omega in Geneious Prime (v2023.2.1., Biomatters Ltd.), and consensus sequences and residue frequencies were compared as described. ..

Article Title: A pendant awn phenotype linked to the EMBRYONIC FLOWER 1 LIKE ( EMF1L ) gene in barley
Article Snippet: .. Pairwise sequence identity values were calculated based on multiple sequence alignments of genomic and polypeptide sequences using Clustal Omega 1.2.2 on Geneious Prime version 2023.1.2 (Biomatters Ltd., New Zealand). ..

Software:

Article Title: Evidence from a broad-range PNA probe links several Prevotella species to bacterial vaginosis
Article Snippet: To evaluate probe specificity, 16S rRNA sequences from eight closely related bacterial species were retrieved from ARB-SILVA using the same selection criteria, namely Hallella seregens , Paraprevotella clara , Paraprevotella xylaniphila , Bacteroides fragilis , Parabacteroides distasonis , Tannerella forsythia , Alloprevotella rava and Porphyromonas catuniae . .. The sequences were aligned using Clustal Omega (version 1.2.2), which is implemented in Geneious Prime software (Biomatters, Auckland, New Zealand). ..

Article Title: Detection, genetic characterization and reassortment analysis of Tribeč virus.
Article Snippet: Twenty-one RNA sequences of segment 1 from TRBV, LIPV, MUKV, KEMV, and GIV were downloaded from the National Center for Biotechnology Information database (Fig. 1a). .. Complete coding sequences were aligned using Clustal Omega 1.2.2 [36] within the Geneious 9.1.8 software (Biomatters, New Zealand). ..

Article Title: Relative performance of three phylogenetic methods based on complete mitochondrial genomes of barnacle
Article Snippet: .. One consisted of the concatenated nucleotide sequences of the 13 PCGs, and the other consisted solely of the COX1 marker region (LCO1490/HCO2198; 658 bp), as described by Folmer et al. . For both datasets, sequence alignment was performed using CLUSTAL Omega in Geneious Prime software (version 2025.0; Biomatters, Auckland, New Zealand). ..

Article Title: Detection, genetic characterization and reassortment analysis of Tribeč virus
Article Snippet: Twenty-one RNA sequences of segment 1 from TRBV, LIPV, MUKV, KEMV, and GIV were downloaded from the National Center for Biotechnology Information database (Fig. a). .. Complete coding sequences were aligned using Clustal Omega 1.2.2 [ ] within the Geneious 9.1.8 software (Biomatters, New Zealand). ..

Marker:

Article Title: Relative performance of three phylogenetic methods based on complete mitochondrial genomes of barnacle
Article Snippet: .. One consisted of the concatenated nucleotide sequences of the 13 PCGs, and the other consisted solely of the COX1 marker region (LCO1490/HCO2198; 658 bp), as described by Folmer et al. . For both datasets, sequence alignment was performed using CLUSTAL Omega in Geneious Prime software (version 2025.0; Biomatters, Auckland, New Zealand). ..

Generated:

Article Title: Genetic Optimization of Early 2009 Pandemic H1N1 Vaccine Strains for Improved Replication in Embryonated Chicken Eggs.
Article Snippet: .. Multiple sequence alignments were generated with Clustal Omega in Geneious Prime (v2023.2.1., Biomatters Ltd.), and consensus sequences and residue frequencies were compared as described. ..

Residue:

Article Title: Genetic Optimization of Early 2009 Pandemic H1N1 Vaccine Strains for Improved Replication in Embryonated Chicken Eggs.
Article Snippet: .. Multiple sequence alignments were generated with Clustal Omega in Geneious Prime (v2023.2.1., Biomatters Ltd.), and consensus sequences and residue frequencies were compared as described. ..



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