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cloud-based computing platforms (DNAnexus Inc)

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DNAnexus Inc cloud-based computing platforms
Cloud Based Computing Platforms, supplied by DNAnexus Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/cloud-based+system/cloud+based+platform/pmc10204111-247-27-33
Average 90 stars, based on 1 article reviews

cloud-based computing platforms - by Bioz Stars, 2026-09

90/100 stars

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Article Title: Assessing the genotoxicity of N-nitrosodiethylamine with three in vivo endpoints in male Big Blue® transgenic and wild-type C57BL/6N mice.
Article Snippet: .. The FASTQ files generated from sequencing were analyzed with the TwinStrand DuplexSeqTM Mutagenesis App on the DNAnexus® cloud computing platform. ..

Sequencing:

Mutagenesis:

Transcriptomics:

Article Title: Synergistic Effects of PARP Inhibition and Cholesterol Biosynthesis Pathway Modulation.
Article Snippet: All data fitting and statistical analysis were performed using GraphPad Prism software (Version 9.2.0), if not otherwise stated. .. Statistical analysis of transcriptomics data Raw FastQ files were processed to count matrices using the cloud processing tool DNAnexus. ..

other:

Article Title: Lessons from national biobank projects utilizing whole-genome sequencing for population-scale genomics
Article Snippet: Computing environment , Cloud-based RAP with DNAnexus and AWS , KISTI National Supercomputing Center ( https://www.ksc.re.kr/eng/index/main ) , RAPTOR (Research Assets Provisioning and Tracking Online Repository) , Local HPC for server-based analysis , Cloud-based workbench (Google Cloud Platform for large-scale analysis).

Article Title: Genetic associations with ratios between protein levels detect new pQTLs and reveal protein-protein interactions
Article Snippet: However, the computational costs of conducting a full-fledged all-against-all ratio GWAS are prohibitive at this point, estimated to several hundred thousand pounds Sterling on the DNAnexus AWS-based platform for a single run of a full-fledged all-against-all ratio GWAS, not considering costs associated with the handling of the generated data.

Article Title: Chromosome level genome assembly of the Etruscan shrew Suncus etruscus
Article Snippet: The assembly was performed on the DNAnexus cloud-based informatics platform for genomic data analyses ( https://www.dnanexus.com ) using the VGP standard genome assembly pipeline version 1.7 ( https://github.com/VGP/vgp-assembly ) .

Article Title: Clinical, pathologic and molecular findings in 2 Rottweiler littermates with appendicular osteosarcoma
Article Snippet: The primary analysis pipeline was automated to generate single-nucleotide variants (SNV), copy number variants (CNV), and internal tandem duplications (ITD), using the DNAnexus cloud-based computing platform (DNAnexus Inc.).

Article Title: Chromosome level genome assembly of the Etruscan shrew Suncus etruscus.
Article Snippet: The assembly was performed on the DNAnexus cloud-based informatics platform for genomic data analyses (https://www.dnanexus.com) using the VGP standard genome assembly pipeline version 1.7 (https://github.com/VGP/vgp-assembly)15.