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Structured Review

RStudio heatmaply package
Heatmaply Package, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/built-in+function+princomp/heatmaply+package/pmc11642145-226-9-8
Average 90 stars, based on 1 article reviews
heatmaply package - by Bioz Stars, 2026-09
90/100 stars

Images

Related Articles

other:

Article Title: Antifungal and Allelopathic Effects of Essential Oil from Calyptranthes concinna DC. Dried Leaves and of Its Major Constituent Elemicin
Article Snippet: The package heatmaply was used for preparing the heat map figure in RStudio Version 2023.03.0 + 386.

Article Title: Type 1 Interferon-Stimulated Gene Expression and Disease Activity in Pediatric Rheumatic Diseases: No Composite Scores Needed?
Article Snippet: Combined hierarchical clustering analysis with dendrogram depiction was performed using the R Studio heatmaply package, and correlation coefficients were compared using the R Studio cocor package.

Generated:

Article Title: Genomic Repertoire of Twenty-Two Novel Vibrionaceae Species Isolated from Marine Sediments.
Article Snippet: .. Subsequently, a heatmap was generated in RStudio 4.2.2 (R Core Team, 2022) using the heatmaply package [30] to better visualize the results. ..

Article Title: Genomic Repertoire of Twenty-Two Novel Vibrionaceae Species Isolated from Marine Sediments
Article Snippet: .. Subsequently, a heatmap was generated in RStudio 4.2.2 (R Core Team, 2022) using the heatmaply package [ ] to better visualize the results. ..

Sampling:

Article Title: Genome-resolved adaptation strategies of Rhodobacterales to changing conditions in the Chesapeake and Delaware Bays
Article Snippet: .. As a proxy to understand the replication of representative Rhodobacterales MAGs in sampling sites, PTR, the ratio of sequence coverage near the origin and that near the terminus of replication were obtained using the program Compute PTR (CoPTR) ( , ) and the heatmaply package in R/RStudio was used to prepare a heatmap from the resulting data ( , ). ..

Sequencing:

Article Title: Genome-resolved adaptation strategies of Rhodobacterales to changing conditions in the Chesapeake and Delaware Bays
Article Snippet: .. As a proxy to understand the replication of representative Rhodobacterales MAGs in sampling sites, PTR, the ratio of sequence coverage near the origin and that near the terminus of replication were obtained using the program Compute PTR (CoPTR) ( , ) and the heatmaply package in R/RStudio was used to prepare a heatmap from the resulting data ( , ). ..



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Image Search Results


(a) True positive rate and (b) false positive rate of spike sorting using PCA (Matlab princomp) and stream-based Hebbian eigenfilter . Benchmarks #1 ~ #12 are obtained from.

Journal: BioMedical Engineering OnLine

Article Title: Stream-based Hebbian eigenfilter for real-time neuronal spike discrimination

doi: 10.1186/1475-925X-11-18

Figure Lengend Snippet: (a) True positive rate and (b) false positive rate of spike sorting using PCA (Matlab princomp) and stream-based Hebbian eigenfilter . Benchmarks #1 ~ #12 are obtained from.

Article Snippet: Matlab built-in functions, princomp , was used as the conventional PCA routine.

Techniques:

Evaluation of spike sorting accuracy with varied SNR . Comparisons between PCA (Matlab princomp) and stream-based Hebbian eigenfilter are based on (a) 2 neruons (b) 3 neruons (c) 4 neurons cases.

Journal: BioMedical Engineering OnLine

Article Title: Stream-based Hebbian eigenfilter for real-time neuronal spike discrimination

doi: 10.1186/1475-925X-11-18

Figure Lengend Snippet: Evaluation of spike sorting accuracy with varied SNR . Comparisons between PCA (Matlab princomp) and stream-based Hebbian eigenfilter are based on (a) 2 neruons (b) 3 neruons (c) 4 neurons cases.

Article Snippet: Matlab built-in functions, princomp , was used as the conventional PCA routine.

Techniques:

Evaluation of false positive rate of spike sorting with varied SNR . Comparisons between stream-based Hebbian eigenfilter and PCA (Matlab princomp) are based on (a) 2 neruons (b) 3 neruons (c) 4 neurons cases.

Journal: BioMedical Engineering OnLine

Article Title: Stream-based Hebbian eigenfilter for real-time neuronal spike discrimination

doi: 10.1186/1475-925X-11-18

Figure Lengend Snippet: Evaluation of false positive rate of spike sorting with varied SNR . Comparisons between stream-based Hebbian eigenfilter and PCA (Matlab princomp) are based on (a) 2 neruons (b) 3 neruons (c) 4 neurons cases.

Article Snippet: Matlab built-in functions, princomp , was used as the conventional PCA routine.

Techniques: