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batch blastx reference search  (TM Software Inc)

 
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    Structured Review

    TM Software Inc batch blastx reference search
    In silico analysis of transcript bias in <t> contigs </t> formed from all sequences in each library, the ten highest R-values were analyzed using <t> BLASTX </t> (e-value ≤1E -10 ).
    Batch Blastx Reference Search, supplied by TM Software Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/blastx/batch+blastx+reference+search/pmc03091659-101-10-22
    Average 90 stars, based on 1 article reviews
    batch blastx reference search - by Bioz Stars, 2026-10
    90/100 stars

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    1) Product Images from "Comparative analysis of expressed sequence tags from three castes and two life stages of the termite Reticulitermes flavipes"

    Article Title: Comparative analysis of expressed sequence tags from three castes and two life stages of the termite Reticulitermes flavipes

    Journal: BMC Genomics

    doi: 10.1186/1471-2164-11-463

    In silico analysis of transcript bias in contigs formed from all sequences in each library, the ten highest R-values were analyzed using BLASTX (e-value ≤1E -10 ).
    Figure Legend Snippet: In silico analysis of transcript bias in contigs formed from all sequences in each library, the ten highest R-values were analyzed using BLASTX (e-value ≤1E -10 ).

    Techniques Used: In Silico

    In silico analysis and predicted protein function of 10 contigs with the highest R-value with no putative role assigned by a BLASTX search.
    Figure Legend Snippet: In silico analysis and predicted protein function of 10 contigs with the highest R-value with no putative role assigned by a BLASTX search.

    Techniques Used: In Silico, Activity Assay

    Related Articles

    In Silico:

    Article Title: Comparative analysis of expressed sequence tags from three castes and two life stages of the termite Reticulitermes flavipes
    Article Snippet: maximum length is limited by the length of sequence; thus, the actual insert size was likely underestimated. .. Both singletons and contigs were assigned putative functions using a batch BLASTX reference search from the non-redundant protein database using BlastStation (v2.61, TMSoftware, Arcadia, CA), with an e-value ≤1e -10 . .. Genes assigned putative housekeeping roles were identified using a list derived from Eisenberg et al. [ ].

    Activity Assay:

    Article Title: Comparative analysis of expressed sequence tags from three castes and two life stages of the termite Reticulitermes flavipes
    Article Snippet: maximum length is limited by the length of sequence; thus, the actual insert size was likely underestimated. .. Both singletons and contigs were assigned putative functions using a batch BLASTX reference search from the non-redundant protein database using BlastStation (v2.61, TMSoftware, Arcadia, CA), with an e-value ≤1e -10 . .. Genes assigned putative housekeeping roles were identified using a list derived from Eisenberg et al. [ ].



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