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InterPro Inc blast2go program v.6.0.2
Blast2go Program V.6.0.2, supplied by InterPro Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/blast2go+program/blast2go/pmc11561002-90-4-11
Average 90 stars, based on 1 article reviews
blast2go program v.6.0.2 - by Bioz Stars, 2026-09
90/100 stars

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Article Title: RNA sequencing of Beauveria bassiana JEF-350-infected Thrips palmi reveals change of host defense and homeostasis
Article Snippet: For GO analysis, the Blast2GO program (v.6.0.2) was utilized with the Interpro feature to annotate the DEG set, leveraging the EMBL-EBI database.

Article Title: Considering admixture when producing draft genomes: an example in North American ratsnakes ( Pantherophis alleghaniensis / Pantherophis obsoletus )
Article Snippet: We only considered predicted proteins that had BLAST or InterPro hits but also used an Annotated or Mapped status from Blast2Go/OmicsBox.

Article Title: Molecular response to CO 2 -driven ocean acidification in the larvae of the sea urchin Hemicentrotus pulcherrimus: Evidence from comparative transcriptome analyses.
Article Snippet: In order to explore the impact of CO2-driven ocean acidification (OA) on gene expression of sea urchins, gametes of Hemicentrotus pulcherrimus were fertilized and developed to the four-armed larvae in either seawater at current pH levels (pHNBS = 7.98) or in three laboratory-controlled OA conditions (ΔpHNBS = − 0.3, − 0.4, − 0.5 units) based on the projections of the Intergovernmental Panel on Climate Change (IPCC) for 2100.. Four-armed larval specimens were collected, and comparative transcriptome analysis was then performed.. The results showed that 58 differentially expressed genes (DEGs) were identified in OA-treated groups as compared to the control.

Article Title: De novo transcriptome analysis and gene expression profiling of Conticribra weissflogii during low salinity reveals regulation of fatty acid biosynthesis genes
Article Snippet: Conticribra weissflogii is a promising oleaginous microalga with a high fatty acid useful for aquaculture food and feed purposes.. Low salinity has been found to promote fatty acid accumulation in microalgae.. However, the effects of low salinities and the molecular mechanisms of fatty acid accumulation in C. weissflogii remain undetermined.

Article Title: Characterization of the swede midge, Contarinia nasturtii , first instar larval salivary gland transcriptome
Article Snippet: BLAST and InterPro GO terms were merged in Blast2GO with the built-in algorithm.

Sequencing:

Article Title: Proteins from anaerobic fungi and uses thereof
Article Snippet: This cDNA library was then sequenced using an Illumina HiSeq next generation sequencing platform, using a standard workflow, and the resulting data was assembled into a de novo transcriptome using the TRINITY bioinformatics platform. .. The assembled sequences were then annotated with the BLAST2GO package by BLAST sequence alignment against known protein sequences and protein domain hidden Markov model (HMM) scans on Interpro of all possible translations of each transcript. ..

Software:

Article Title: Long-Read Sequencing Reveals Increased Isoform Diversity in Key Transcription Factor Effectors of Intercellular Signalling at the Invertebrate-Vertebrate Transition
Article Snippet: .. For obtaining the GO annotations, the InterPro Scan option of Blast2GO software (v.6.0.3) and the EggNOG-mapper tool were run using each transcriptome dataset as input. ..

Functional Assay:

Article Title: Comparative genomics of Metarhizium brunneum strains V275 and ARSEF 4556: unraveling intraspecies diversity
Article Snippet: .. Predicted protein sequences were aligned to the functional databases Swiss-Prot using blast2GO suite ( Conesa et al . 2005 ), Interpro (v5.53-87.0) and pfam (v1.6) as well as cluster of orthologous Genes (COG) database. using COGclassifier ( ). ..



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