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virus encoding cas9  (Addgene inc)


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    Structured Review

    Addgene inc virus encoding cas9
    KEY RESOURCES TABLE
    Virus Encoding Cas9, supplied by Addgene inc, used in various techniques. Bioz Stars score: 96/100, based on 1656 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/blast++sequence+alignment+software+package/lentiCas9-Blast+(Plasmid+%2352962)/pmc07197326-857-22-25
    Average 96 stars, based on 1656 article reviews
    virus encoding cas9 - by Bioz Stars, 2026-10
    96/100 stars

    Images

    1) Product Images from "Vitamin B6 addiction in acute myeloid leukemia"

    Article Title: Vitamin B6 addiction in acute myeloid leukemia

    Journal: Cancer cell

    doi: 10.1016/j.ccell.2019.12.002

    KEY RESOURCES TABLE
    Figure Legend Snippet: KEY RESOURCES TABLE

    Techniques Used: Plasmid Preparation, Recombinant, Mutagenesis, RNA Extraction, Gel Extraction, Clone Assay, Purification, Flow Cytometry, Sequencing, CRISPR, Functional Assay, shRNA, Software

    Related Articles

    Gene Knockout:

    Article Title: METTL1-mediated m 7 G modification of valine tRNAs drives metabolic adaptation in pancreatic ductal adenocarcinoma cells
    Article Snippet: The sgRNAs targeting METTL1 were designed and purchased from Applied Biological Materials. .. Lentiviruses for KO of METTL1 were generated by cotransfecting the second-generation lentiviral packaging vectors (2.25 μg psPAX2 and 0.75 μg pMD2.G), 3 μg lentiCas9-Blast plasmid (Addgene, 52962), or 3 μg lentiGuide-hygro sgRNA into HEK293T cells using X-tremeGENE HP DNA Transfection Reagent (MilliporeSigma, 6366546001). ..

    Generated:

    Article Title: METTL1-mediated m 7 G modification of valine tRNAs drives metabolic adaptation in pancreatic ductal adenocarcinoma cells
    Article Snippet: The sgRNAs targeting METTL1 were designed and purchased from Applied Biological Materials. .. Lentiviruses for KO of METTL1 were generated by cotransfecting the second-generation lentiviral packaging vectors (2.25 μg psPAX2 and 0.75 μg pMD2.G), 3 μg lentiCas9-Blast plasmid (Addgene, 52962), or 3 μg lentiGuide-hygro sgRNA into HEK293T cells using X-tremeGENE HP DNA Transfection Reagent (MilliporeSigma, 6366546001). ..

    Article Title: MitoPerturb-Seq identifies gene-specific single-cell responses to mitochondrial DNA depletion and heteroplasmy.
    Article Snippet: Primary m.5024C>T MEFs were described previously11, isolated from individual E13.5 embryos and immortalized by transfection with the SV40 large T antigen (pBSSVD2005, a gift from D. Ron; Addgene, plasmid 21826). .. Cas9-expressing m.5024C>T MEFs were generated by transducing with lentiCas9-Blast lentivirus (Addgene, 52962)96. .. Following transduction, cells were selected with 10 μg ml−1 blasticidin (Sigma, SBR00022).

    Article Title: Genome-wide profiling identifies the genetic dependencies of cell death following EGFR inhibition.
    Article Snippet: .. 508 509 Generation of PC9-Cas9 cell line 510 PC9-Cas9 cells were generated using a virus containing lenti-Cas9-Blast (Addgene, 511 52962). .. Viral infection was performed by plating 2 million PC9 cells per well in a 12-well dish 512 and adding virus, along with 8 μg/ml polybrene (Millipore, TR1003G).

    Plasmid Preparation:

    Article Title: METTL1-mediated m 7 G modification of valine tRNAs drives metabolic adaptation in pancreatic ductal adenocarcinoma cells
    Article Snippet: The sgRNAs targeting METTL1 were designed and purchased from Applied Biological Materials. .. Lentiviruses for KO of METTL1 were generated by cotransfecting the second-generation lentiviral packaging vectors (2.25 μg psPAX2 and 0.75 μg pMD2.G), 3 μg lentiCas9-Blast plasmid (Addgene, 52962), or 3 μg lentiGuide-hygro sgRNA into HEK293T cells using X-tremeGENE HP DNA Transfection Reagent (MilliporeSigma, 6366546001). ..

    Article Title: Persistent chromatin alterations and gene expression reprogramming follow widespread DNA damage in glioblastoma.
    Article Snippet: FgH1tUTCherry was a gift from Marco Herold (received through Addgene plasmid # 85552). .. LentiCas9-Blast was a gift from Feng Zhang (received through Addgene plasmid # 52962). .. For technical assistance, we thankNalWeissman, theNYU Langonegenomics core, NYU Langone microscopy and Integrated DNA Technologies (IDT).

    Article Title: Computationally guided discovery of Ly6e/LY6E-dependent AAV capsid variants
    Article Snippet: 620 The following gRNA sequences (5’-3’) were used for CRISPR-Cas9 genome editing: Jo urn al Pr e-p roo f 33 GCCCTTCTGGGTGTGGAGCG (PAM: AGG) The gRNA was inserted into the U6-sgRNA backbone derived from AAV:ITR-U6-621 sgRNA(backbone)-pCBh-Cre-WPRE-hGHpA-ITR (Addgene plasmid #60229). .. For lentiviral 622 backbone construction, Lenti-Cas9-blast (Addgene plasmid #52962) was modified by 623 inserting mCherry between the BamHI and EcoRV restriction recognition sites, generating 624 Lenti-Cas9-mCherry. ..

    Article Title: Integrated stress response activation in combination PG3 and cisplatin-treated TP53 -mutated head and neck squamous carcinoma cells induces potent apoptotic response
    Article Snippet: Lentivirus was produced by transfecting Lenti-X-293T cells (Takara #632180) with the following plasmids: transfer plasmid, pRSV-Rev (Addgene #12253), pMDLg/pRRE (Addgene #12251), and pMD2.G (Addgene #12259) using Lipofectamine 2000 (ThermoFisher 11668019) per the manufacturer’s protocol. .. The transfer plasmid used are as follows: lentiCas9-Blast (Addgene #52962), non-targeting control gRNA (Addgene #80263), HRI g2 (Addgene #77050), PKR g1 (Addgene #75637), PERK g1 (Addgene #77166), PERK g2 (Addgene #77168), GCN2 g1 (Addgene #75877), and GCN2 g2 (Addgene #75876). ..

    Transfection:

    Article Title: METTL1-mediated m 7 G modification of valine tRNAs drives metabolic adaptation in pancreatic ductal adenocarcinoma cells
    Article Snippet: The sgRNAs targeting METTL1 were designed and purchased from Applied Biological Materials. .. Lentiviruses for KO of METTL1 were generated by cotransfecting the second-generation lentiviral packaging vectors (2.25 μg psPAX2 and 0.75 μg pMD2.G), 3 μg lentiCas9-Blast plasmid (Addgene, 52962), or 3 μg lentiGuide-hygro sgRNA into HEK293T cells using X-tremeGENE HP DNA Transfection Reagent (MilliporeSigma, 6366546001). ..

    Virus:

    Article Title: Genome-wide profiling identifies the genetic dependencies of cell death following EGFR inhibition.
    Article Snippet: .. 508 509 Generation of PC9-Cas9 cell line 510 PC9-Cas9 cells were generated using a virus containing lenti-Cas9-Blast (Addgene, 511 52962). .. Viral infection was performed by plating 2 million PC9 cells per well in a 12-well dish 512 and adding virus, along with 8 μg/ml polybrene (Millipore, TR1003G).

    Modification:

    Article Title: Computationally guided discovery of Ly6e/LY6E-dependent AAV capsid variants
    Article Snippet: 620 The following gRNA sequences (5’-3’) were used for CRISPR-Cas9 genome editing: Jo urn al Pr e-p roo f 33 GCCCTTCTGGGTGTGGAGCG (PAM: AGG) The gRNA was inserted into the U6-sgRNA backbone derived from AAV:ITR-U6-621 sgRNA(backbone)-pCBh-Cre-WPRE-hGHpA-ITR (Addgene plasmid #60229). .. For lentiviral 622 backbone construction, Lenti-Cas9-blast (Addgene plasmid #52962) was modified by 623 inserting mCherry between the BamHI and EcoRV restriction recognition sites, generating 624 Lenti-Cas9-mCherry. ..

    Control:

    Article Title: Integrated stress response activation in combination PG3 and cisplatin-treated TP53 -mutated head and neck squamous carcinoma cells induces potent apoptotic response
    Article Snippet: Lentivirus was produced by transfecting Lenti-X-293T cells (Takara #632180) with the following plasmids: transfer plasmid, pRSV-Rev (Addgene #12253), pMDLg/pRRE (Addgene #12251), and pMD2.G (Addgene #12259) using Lipofectamine 2000 (ThermoFisher 11668019) per the manufacturer’s protocol. .. The transfer plasmid used are as follows: lentiCas9-Blast (Addgene #52962), non-targeting control gRNA (Addgene #80263), HRI g2 (Addgene #77050), PKR g1 (Addgene #75637), PERK g1 (Addgene #77166), PERK g2 (Addgene #77168), GCN2 g1 (Addgene #75877), and GCN2 g2 (Addgene #75876). ..



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