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Applied BioMath bionumerics software
Bionumerics Software, supplied by Applied BioMath, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bionumerics+software+program/bionumerics+software/ppr0421558-85-11-13
Average 90 stars, based on 1 article reviews
bionumerics software - by Bioz Stars, 2026-09
90/100 stars

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Software:

Article Title: Bioenergy Recovery from Anaerobic Co-Digestion of Crude Glycerol and Domestic Sewage In-Series Reactor: Microbial Characterization and System Performance
Article Snippet: Experiments in series horizontal anaerobic reactors with fixed bed (HARFB) were conducted to evaluate the co-digestion of crude glycerol (CG) from biodiesel production and domestic sewage (DS) concerning the start-up strategy and best organic loading rate (OLR) to improve biogas production as well as to analyze the dynamic changes in the anaerobic microbial consortium during their operation.. This approach can be used to increase the buffering capacity of anaerobic reactors as well as dilute toxic compounds.. The reactor configuration applied at the present research is a novelty about CG and DS co-digestion and biogas production.

Article Title: Triclosan affects the microbial community in simulated sewage-drain-field soil and slows down xenobiotic degradation.
Article Snippet: Effects of the common antibacterial agent triclosan on microbial communities and degradation of domestic xenobiotics were studied in simulated sewage-drain-field soil.. Cultivable microbial populations decreased 22-fold in the presence of 4 mg kg 1 of triclosan, and triclosan-resistant Pseudomonas strains were strongly enriched.. Exposure to triclosan also changed the general metabolic profile (Ecoplate substrate profiling) and the general profile (T-RFLP) of the microbial community.

Article Title: Obtaining and Characterization of Mesophilic Bacterial Consortia from Tropical Sludges Applied on Biohydrogen Production
Article Snippet: Then they were grouped in OTU (Operational Taxonomic Unit) and compared to the National Center for Biotechnology Information (NCBI) database. .. The construction of the DGGE dendrogram was performed using BioNumerics’ software package (Applied Biomath, Belgium) and the similarity coefficients were calculated from the densitometric curves of the scanned DGGE profiles, using the Jaccard correlation. ..

Article Title: Bioconversion of Crude Glycerol to Hydrogen and Methane in Three-Stage Horizontal Anaerobic Fixed-Bed Reactors (HARFB)
Article Snippet: The gel was soaked in Fluorescent dye DiamondTM Nucleic Acid Dye (Promega) (1:10,000) for 20 min, and gel band patterns were observed using Eagle Eye TMIII (Stratagene) with UV at 254 nm, connected to a computer and analyzed using Eagle Sight software (L.PixTouch - Loccus Biotechnology). .. Band-based Jaccard similarity coe cient was used for dendrogram construction using BioNumerics software (Applied Biomath, Belgic). ..

Article Title: Genetic diversity and expression of carbon monoxide dehydrogenase from Aeropyrum pernix
Article Snippet: The aerobic hyperthermophilic archaeon Aeropyrum pernix expresses molybdopterin carbon monoxide dehydrogenase (Mo-CODH).. A. pernix strains isolated from Tachibana Bay (TB1–8) were found to exhibit different levels of total Mo-CODH activity (low and high, respectively), and the Mo-CODHs isolated from these strains also exhibit high or low activity.. Mo-CODH gene transcription was detected by real-time reverse transcription-PCR, but no relation was found between the expression level of mRNA and the activity level of Mo-CODH.

Injection:

Article Title: Triclosan affects the microbial community in simulated sewage-drain-field soil and slows down xenobiotic degradation.
Article Snippet: Effects of the common antibacterial agent triclosan on microbial communities and degradation of domestic xenobiotics were studied in simulated sewage-drain-field soil.. Cultivable microbial populations decreased 22-fold in the presence of 4 mg kg 1 of triclosan, and triclosan-resistant Pseudomonas strains were strongly enriched.. Exposure to triclosan also changed the general metabolic profile (Ecoplate substrate profiling) and the general profile (T-RFLP) of the microbial community.

Staining:

Article Title: Purification and characterization of carbon monoxide dehydrogenase from the aerobic hyperthermophilic archaeon Aeropyrum pernix
Article Snippet: The aerobic hyperthermophilic archaeon Aeropyrum pernix expresses carbon monoxide (CO) oxidation activity under heterotrophic growth conditions.. Using activity stain gel analysis, CO oxidation activity was detected in a protein with a molecular mass of 210 kDa.. The 210 kDa CODH protein was purified to homogeneity from A. pernix.

Article Title: Genetic diversity and expression of carbon monoxide dehydrogenase from Aeropyrum pernix
Article Snippet: The aerobic hyperthermophilic archaeon Aeropyrum pernix expresses molybdopterin carbon monoxide dehydrogenase (Mo-CODH).. A. pernix strains isolated from Tachibana Bay (TB1–8) were found to exhibit different levels of total Mo-CODH activity (low and high, respectively), and the Mo-CODHs isolated from these strains also exhibit high or low activity.. Mo-CODH gene transcription was detected by real-time reverse transcription-PCR, but no relation was found between the expression level of mRNA and the activity level of Mo-CODH.

Denaturing Gradient Gel Electrophoresis:

Article Title: Obtaining and Characterization of Mesophilic Bacterial Consortia from Tropical Sludges Applied on Biohydrogen Production
Article Snippet: Then they were grouped in OTU (Operational Taxonomic Unit) and compared to the National Center for Biotechnology Information (NCBI) database. .. The construction of the DGGE dendrogram was performed using BioNumerics’ software package (Applied Biomath, Belgium) and the similarity coefficients were calculated from the densitometric curves of the scanned DGGE profiles, using the Jaccard correlation. ..

Article Title: Sugarcane vinasse as substrate for fermentative hydrogen production: The effects of temperature and substrate concentration
Article Snippet: The present study aimed to evaluate the hydrogen production of a microbial consortium using different concentrations of sugarcane vinasse (2e12 g COD L ) at 37 C and 55 C. In mesophilic tests, the increase in vinasse concentration did not significantly impact the hydrogen yield (HY) (from 1.72 to 2.23 mmol H2 g 1 CODinfluent) but had a positive effect on the hydrogen production potential (P) and hydrogen production rate (Rm).. On the other hand, the increase in the substrate concentration caused a drop in HY from 2.31 to 0.44 mmol H2 g 1 CODinfluent in the tests performed at 55 C with vinasse concentrations from 2 to 12 g COD L . The mesophilic community was composed of different species within the Clostridium genus, and the thermophilic community was dominated by organisms affiliated with the Thermoanaerobacter genus.. Not all isolates affiliated with the Clostridium genus contributed to a high HY, as the homoacetogenic pathway can occur.



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