reformat.sh (SourceForge net)
90
Structured Review
SourceForge net
reformat.sh
Reformat.Sh, supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bbtools+reformat%2Esh+script/reformat+sh/pm35820472-79-3-9
Average 90 stars, based on 1 article reviews
Reformat.Sh, supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bbtools+reformat%2Esh+script/reformat+sh/pm35820472-79-3-9
Average 90 stars, based on 1 article reviews
reformat.sh - by Bioz Stars,
2026-10
90/100 stars
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Related Articles
other:Article Title: Maritime Pine Rootstock Genotype Modulates Gene Expression Associated with Stress Tolerance in Grafted Stems Article Snippet: The Reformat.sh script from the BBTools (version 38.90) pack was used to trim the read-end nucleotides and regions with a mean quality score of <20, and to filter out the sequences with a minimum length of <30 bp and a minimum mean quality of <20 ( https://sourceforge.net/projects/bbmap/ ; accessed on 9 October 2020). Article Title: Complete Genomic Assembly of Mauritian Cynomolgus Macaque Killer Ig-like Receptor and Natural Killer Group 2 Haplotypes Article Snippet: After extraction, the reads were converted from BAM to FASTQ format using BBTools reformat.sh ( https://sourceforge.net/projects/bbmap/ ). Article Title: Functional potential and evolutionary response to long-term heat selection of bacterial associates of coral photosymbionts. Article Snippet: The Article Title: Uncovering the genomic basis of symbiotic interactions and niche adaptations in freshwater picocyanobacteria Article Snippet: Low-quality reads were trimmed using reformat.sh and bbduk.sh (Phred score = 18) of the Article Title: Genome-wide identification of long non-coding RNA for Botrytis cinerea during infection to tomato ( Solanum lycopersicum ) leaves Article Snippet: After read mapping, reads with 17–27 nt were extracted, using the ‘reformat.sh’ script in Article Title: Metagenomic global survey and in-depth genomic analyses of Ruminococcus gnavus reveal differences across host lifestyle and health status. Article Snippet: We filtered out contigs shorter than 1000bp using BBtools’ Article Title: A conserved interdomain microbial network underpins cadaver decomposition despite environmental variables Article Snippet: BAM files were filtered for reads mapping at 95% identity using the Article Title: Metagenomic global survey and in-depth genomic analyses of Ruminococcus gnavus reveal differences across host lifestyle and health status Article Snippet: We filtered out contigs shorter than 1000 bp using BBtools’ |