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Biomatters Ltd bbduk plugin
Bbduk Plugin, supplied by Biomatters Ltd, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bbduk+plugin/bbduk/pm41367055-40-18-11
Average 86 stars, based on 1 article reviews
bbduk plugin - by Bioz Stars, 2026-10
86/100 stars

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Related Articles

Sequencing:

Article Title: Complete chloroplast genome of the federally endangered Menzies' wallflower Erysimum menziesii (Brassicaceae, Anthophyta) from California, USA.
Article Snippet: The 150 bp paired-end library was constructed with the NEBNext Ultra II DNA Library Prep kit (New England Biolabs) and sequenced with RTA3 quality control software on an Illumina NovaSeq 6000 (Illumina, Inc.) by Novogene Corporation Inc. .. The sequencing generated 21,122,994 reads that were filtered using the default BBDuk 1.0 (13) settings in Geneious Prime 2019.1.3 (Biomatters Limited). ..

Article Title: Complete chloroplast genome of the federally endangered Menzies’ wallflower Erysimum menziesii (Brassicaceae, Anthophyta) from California, USA
Article Snippet: The 150 bp paired-end library was constructed with the NEBNext Ultra II DNA Library Prep kit (New England Biolabs) and sequenced with RTA3 quality control software on an Illumina NovaSeq 6000 (Illumina, Inc.) by Novogene Corporation Inc. .. The sequencing generated 21,122,994 reads that were filtered using the default BBDuk 1.0 ( ) settings in Geneious Prime 2019.1.3 (Biomatters Limited). ..

Generated:

Article Title: Complete chloroplast genome of the federally endangered Menzies' wallflower Erysimum menziesii (Brassicaceae, Anthophyta) from California, USA.
Article Snippet: The 150 bp paired-end library was constructed with the NEBNext Ultra II DNA Library Prep kit (New England Biolabs) and sequenced with RTA3 quality control software on an Illumina NovaSeq 6000 (Illumina, Inc.) by Novogene Corporation Inc. .. The sequencing generated 21,122,994 reads that were filtered using the default BBDuk 1.0 (13) settings in Geneious Prime 2019.1.3 (Biomatters Limited). ..

Article Title: Complete chloroplast genome of the federally endangered Menzies’ wallflower Erysimum menziesii (Brassicaceae, Anthophyta) from California, USA
Article Snippet: The 150 bp paired-end library was constructed with the NEBNext Ultra II DNA Library Prep kit (New England Biolabs) and sequenced with RTA3 quality control software on an Illumina NovaSeq 6000 (Illumina, Inc.) by Novogene Corporation Inc. .. The sequencing generated 21,122,994 reads that were filtered using the default BBDuk 1.0 ( ) settings in Geneious Prime 2019.1.3 (Biomatters Limited). ..

Control:

Article Title: Loss of the ESX-5 secretion locus in Mycobacterium tuberculosis reshapes the mycomembrane and enhances ESX-1 substrate secretion.
Article Snippet: .. BBDuk trimmer (Biomatters ltd.), and FastQC (v0.11.9) were used to trim and perform quality control on the reads. ..

Quantitative Proteomics:

Article Title: Roles of Alp and Prt Regulons in the Response of Pseudomonas aeruginosa to UV ‐C Light
Article Snippet: .. Bioinformatic analyses were performed by quality‐filtering reads with BBDuk (BBTools by Brian Bushnell), mapping reads to the reference genome with BWA (Li and Durbin ) and calculating differential expression with DESeq2 (Love et al. ) in Geneious Prime (Biomatters). ..



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