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Sinsheimer Laboratories markovian model for evolutionary change
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Selection:

Article Title: On the surprising effectiveness of a simple matrix exponential derivative approximation, with application to global SARS-CoV-2
Article Snippet: .. MA Suchard, RE Weiss, JS Sinsheimer, Bayesian selection of continuous-time markov chain evolutionary models. ..

Article Title: A Phylogeny of Toadflaxes (LinariaMill.) Based on Nuclear Internal Transcribed Spacer Sequences: Systematic and Evolutionary Consequences
Article Snippet: A Phylogeny of Toadflaxes ( Linaria Mill.). Based on Nuclear Internal Transcribed Spacer Sequences: Systematic and Evolutionary Consequences Author(s): Mario Fernández-Mazuecos, José Luis Blanco-Pastor, and Pablo Vargas Reviewed work(s): Source: International Journal of Plant Sciences, Vol.. 174, No. 2 (February 2013), pp.

Article Title: Molecular-clock methods for estimating evolutionary rates and timescales.
Article Snippet: .. Suchard MA, Weiss RE, Sinsheimer JS (2001) Bayesian selection of continuous-time Markov chain evolutionary models. ..

Article Title: Biogeography and taxonomy of extinct and endangered monk seals illuminated by ancient DNA and skull morphology.
Article Snippet: .. Bioinformatics 22: 2688–2690. doi: 10.1093/bioinformatics/btl446 Suchard MA, Weiss RE, Sinsheimer JS (2001) Bayesian selection of continuous-time Markov chain evolutionary models. ..

Article Title: Multi-year evolutionary dynamics of West Nile virus in suburban Chicago, USA, 2005-2007
Article Snippet: .. 81 , 2531–2534 ( doi:10.1128/JVI.02169-06 ) [ PMC free article ] [ PubMed ] Suchard M. A., Weiss R. E., Sinsheimer J. S. 2001 Bayesian selection of continuous-time Markov chain evolutionary models . ..

Article Title: Host shifts and molecular evolution of H7 avian influenza virus hemagglutinin
Article Snippet: .. Suchard MA, Weiss RE, Sinsheimer JS: Bayesian selection of continuous- time Markov chain evolutionary models. ..

Sequencing:

Article Title: Extended phylogeny and a revised generic classification of thePannariaceae(Peltigerales, Ascomycota)
Article Snippet: .. Suchard, M. A., Kitchen, C. M. R., Sinsheimer, J. S. & Weiss, R. E. (2003) Hierarchical phylogenetic models for analyzing multipartite sequence data. ..

other:

Article Title: Eukaryotic origins
Article Snippet: For example, my former graduate student, now Prof. Janet Sinsheimer, and her first graduate student, now Prof. Marc Suchard, developed sophisticated, continuous time Markov models in order to test the eocyte hypothesis [ ].



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Comparison of 12-month and 33-month ahead forecasts for monthly Hepatitis B incidence in Henan Province, China, 2014–2023, using seasonal autoregressive integrated moving average, seasonal autoregressive integrated moving average with exogenous variables, Bayesian structural time series without Baidu Index, and Bayesian structural time series with Baidu Index models. A Seasonal autoregressive integrated moving average model for 12-month ahead forecasts. B Seasonal autoregressive integrated moving average with exogenous variables model for 12-month ahead forecasts. C Bayesian structural time series model without Baidu Index for 12-month ahead forecasts. D Bayesian structural time series model with Baidu Index for 12-month ahead forecasts. E Seasonal autoregressive integrated moving average model for 33-month ahead forecasts. F Seasonal autoregressive integrated moving average with exogenous variables model for 33-month ahead forecasts. G Bayesian structural time series model without Baidu Index for 33-month ahead forecasts. H Bayesian structural time series model with Baidu Index for 33-month ahead forecasts. The Bayesian structural time series models, especially with Baidu Index, demonstrate superior predictive performance

Journal: Archives of Public Health

Article Title: Early warning of hepatitis B epidemics in Henan Province, China, from 2014 to 2023 based on Baidu Index and Bayesian Structural Time Series model

doi: 10.1186/s13690-026-01837-y

Figure Lengend Snippet: Comparison of 12-month and 33-month ahead forecasts for monthly Hepatitis B incidence in Henan Province, China, 2014–2023, using seasonal autoregressive integrated moving average, seasonal autoregressive integrated moving average with exogenous variables, Bayesian structural time series without Baidu Index, and Bayesian structural time series with Baidu Index models. A Seasonal autoregressive integrated moving average model for 12-month ahead forecasts. B Seasonal autoregressive integrated moving average with exogenous variables model for 12-month ahead forecasts. C Bayesian structural time series model without Baidu Index for 12-month ahead forecasts. D Bayesian structural time series model with Baidu Index for 12-month ahead forecasts. E Seasonal autoregressive integrated moving average model for 33-month ahead forecasts. F Seasonal autoregressive integrated moving average with exogenous variables model for 33-month ahead forecasts. G Bayesian structural time series model without Baidu Index for 33-month ahead forecasts. H Bayesian structural time series model with Baidu Index for 33-month ahead forecasts. The Bayesian structural time series models, especially with Baidu Index, demonstrate superior predictive performance

Article Snippet: G Bayesian structural time series model without Baidu Index for 33-month ahead forecasts.

Techniques: Comparison