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basic local alignment sequence tool (blast) search engine  (Biotechnology Information)

 
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    Biotechnology Information basic local alignment sequence tool (blast) search engine
    Basic Local Alignment Sequence Tool (Blast) Search Engine, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/basic+local+alignment+sequence+tool+(blast)/basic+local+alignment+sequence+tool++blast+/pmc11089355-166-23-16
    Average 90 stars, based on 1 article reviews
    basic local alignment sequence tool (blast) search engine - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    Sequencing:

    Article Title: Microfluidic PCR and network analysis reveals complex tick-borne pathogen interactions in the tropics.
    Article Snippet: Subsequently, these sequences were analysed to identify the targeted TBPs by conducting a search against the GenBank database using the Basic Local Alignment Sequence Tool (BLASTn) search engine (http:// blast. ncbi. nlm. nih. gov/ Blast. cgi) [20] provided by the National Center for Biotechnology Information (NCBI, Bethesda, MD, USA).

    Article Title: One health approach to study human health risks associated with Dermanyssus gallinae mites
    Article Snippet: For analysis of the nucleotide sequences, we utilized the GenBank database via the National Center for Biotechnology Information (NCBI; Bethesda, MD), employing the Basic Local Alignment Sequence Tool (BLAST) search engine ( www.ncbi.nlm.nih.gov/blast , accessed on April 5, 2023).

    Article Title: Detection of Seed – Borne Fungal Pathogens Associated with Barley (Hordeum vulgare) Seeds and Their Bio-Control Under Laboratory Conditions
    Article Snippet: The nucleotide sequences were submitted to the Gene Bank , the level of identity of the nitrogenous base pairs sequence of the gene under study with its proven counterparts at the National Center for Biotechnology Information (NCBI) was determined through the use of the Basic Local Alignment Sequence Tool (BLAST) application or algorithm [22], The sequence of the nitrogenous bases of the genes under study was used in the BioEdit program to detect the discrepancy between the sequence of the nitrogenous bases of the gene with the comparison sequences in NCBI in order to identify the alternative single nucleotide polymorphism (SNP) as a result of addition, deletion, or substitution in those nitrogenous bases of the gene ITS1-ITS4 and to determine the variation at the level of One nitrogenous base SNP as shown in fig (3).

    Article Title: Diversity, growth promoting potential and anti-fungal properties of culturable endophytic bacteria isolated from Condonopsis pilosula roots
    Article Snippet: Plant growth-promoting endophytic bacteria (PGPE) play a crucial role in the growth, development, and disease resistance of medicinal plants.. However, systematic research and classification of culturable PGPE associated with Codonopsis pilosula have not been conducted.. To identify the probiotic species of C. pilosula and establish a bacterial screening library, this study employed pure culture methods to isolate PGPE from C. pilosula across various regions and seasons in Gansu.

    Article Title: Characterization of genital chlamydia amongst female sex workers in Nairobi, Kenya
    Article Snippet: Consensus DNA sequences were generated using BioEdit software v7.2 (Bioz, Los Altos, California, United States), and C. trachomatis genotype identification was done using the Basic Local Alignment Sequence Tool (BLAST) [ ] (National Center for Biotechnology Information, Bethesda, Maryland, United States).

    Article Title: Pathogens Detected in Questing Ixodes ricinus Ticks in a Mountainous Area in Greece
    Article Snippet: The nucleotide sequences were compared with respective ones available in GenBank using the National Center for Biotechnology Information (NCBI) Basic Local Alignment Sequence Tool (BLAST) search engine ( https://blast.ncbi.nlm.nih.gov/ , accessed on 5 February 2024) to identify the best match.

    Article Title: Molecular basis of FIGNL1 in dissociating RAD51 from DNA and chromatin
    Article Snippet: Vertebrate FIGNL1 or RAD51 ortholog protein sequences were retrieved from the NCBI (National Center for Biotechnology Information) database and aligned using COBALT (constraint-based multiple sequence alignment tool).

    Article Title: Microfluidic PCR and network analysis reveals complex tick-borne pathogen interactions in the tropics
    Article Snippet: Subsequently, these sequences were analysed to identify the targeted TBPs by conducting a search against the GenBank database using the Basic Local Alignment Sequence Tool (BLASTn) search engine ( http://blast.ncbi.nlm.nih.gov/Blast.cgi ) [ ] provided by the National Center for Biotechnology Information (NCBI, Bethesda, MD, USA).

    Comparison:

    Article Title: Microfluidic PCR and network analysis reveals complex tick-borne pathogen interactions in the tropics.
    Article Snippet: Subsequently, these sequences were analysed to identify the targeted TBPs by conducting a search against the GenBank database using the Basic Local Alignment Sequence Tool (BLASTn) search engine (http:// blast. ncbi. nlm. nih. gov/ Blast. cgi) [20] provided by the National Center for Biotechnology Information (NCBI, Bethesda, MD, USA).

    Article Title: One health approach to study human health risks associated with Dermanyssus gallinae mites
    Article Snippet: For analysis of the nucleotide sequences, we utilized the GenBank database via the National Center for Biotechnology Information (NCBI; Bethesda, MD), employing the Basic Local Alignment Sequence Tool (BLAST) search engine ( www.ncbi.nlm.nih.gov/blast , accessed on April 5, 2023).

    Article Title: Detection of Seed – Borne Fungal Pathogens Associated with Barley (Hordeum vulgare) Seeds and Their Bio-Control Under Laboratory Conditions
    Article Snippet: The nucleotide sequences were submitted to the Gene Bank , the level of identity of the nitrogenous base pairs sequence of the gene under study with its proven counterparts at the National Center for Biotechnology Information (NCBI) was determined through the use of the Basic Local Alignment Sequence Tool (BLAST) application or algorithm [22], The sequence of the nitrogenous bases of the genes under study was used in the BioEdit program to detect the discrepancy between the sequence of the nitrogenous bases of the gene with the comparison sequences in NCBI in order to identify the alternative single nucleotide polymorphism (SNP) as a result of addition, deletion, or substitution in those nitrogenous bases of the gene ITS1-ITS4 and to determine the variation at the level of One nitrogenous base SNP as shown in fig (3).

    Article Title: Diversity, growth promoting potential and anti-fungal properties of culturable endophytic bacteria isolated from Condonopsis pilosula roots
    Article Snippet: Plant growth-promoting endophytic bacteria (PGPE) play a crucial role in the growth, development, and disease resistance of medicinal plants.. However, systematic research and classification of culturable PGPE associated with Codonopsis pilosula have not been conducted.. To identify the probiotic species of C. pilosula and establish a bacterial screening library, this study employed pure culture methods to isolate PGPE from C. pilosula across various regions and seasons in Gansu.

    Article Title: Characterization of genital chlamydia amongst female sex workers in Nairobi, Kenya
    Article Snippet: Consensus DNA sequences were generated using BioEdit software v7.2 (Bioz, Los Altos, California, United States), and C. trachomatis genotype identification was done using the Basic Local Alignment Sequence Tool (BLAST) [ ] (National Center for Biotechnology Information, Bethesda, Maryland, United States).

    Article Title: Pathogens Detected in Questing Ixodes ricinus Ticks in a Mountainous Area in Greece
    Article Snippet: The nucleotide sequences were compared with respective ones available in GenBank using the National Center for Biotechnology Information (NCBI) Basic Local Alignment Sequence Tool (BLAST) search engine ( https://blast.ncbi.nlm.nih.gov/ , accessed on 5 February 2024) to identify the best match.

    Article Title: Molecular basis of FIGNL1 in dissociating RAD51 from DNA and chromatin
    Article Snippet: Vertebrate FIGNL1 or RAD51 ortholog protein sequences were retrieved from the NCBI (National Center for Biotechnology Information) database and aligned using COBALT (constraint-based multiple sequence alignment tool).

    Article Title: Microfluidic PCR and network analysis reveals complex tick-borne pathogen interactions in the tropics
    Article Snippet: Subsequently, these sequences were analysed to identify the targeted TBPs by conducting a search against the GenBank database using the Basic Local Alignment Sequence Tool (BLASTn) search engine ( http://blast.ncbi.nlm.nih.gov/Blast.cgi ) [ ] provided by the National Center for Biotechnology Information (NCBI, Bethesda, MD, USA).

    Generated:

    Article Title: Microfluidic PCR and network analysis reveals complex tick-borne pathogen interactions in the tropics.
    Article Snippet: Subsequently, these sequences were analysed to identify the targeted TBPs by conducting a search against the GenBank database using the Basic Local Alignment Sequence Tool (BLASTn) search engine (http:// blast. ncbi. nlm. nih. gov/ Blast. cgi) [20] provided by the National Center for Biotechnology Information (NCBI, Bethesda, MD, USA).

    Article Title: One health approach to study human health risks associated with Dermanyssus gallinae mites
    Article Snippet: For analysis of the nucleotide sequences, we utilized the GenBank database via the National Center for Biotechnology Information (NCBI; Bethesda, MD), employing the Basic Local Alignment Sequence Tool (BLAST) search engine ( www.ncbi.nlm.nih.gov/blast , accessed on April 5, 2023).

    Article Title: Detection of Seed – Borne Fungal Pathogens Associated with Barley (Hordeum vulgare) Seeds and Their Bio-Control Under Laboratory Conditions
    Article Snippet: The nucleotide sequences were submitted to the Gene Bank , the level of identity of the nitrogenous base pairs sequence of the gene under study with its proven counterparts at the National Center for Biotechnology Information (NCBI) was determined through the use of the Basic Local Alignment Sequence Tool (BLAST) application or algorithm [22], The sequence of the nitrogenous bases of the genes under study was used in the BioEdit program to detect the discrepancy between the sequence of the nitrogenous bases of the gene with the comparison sequences in NCBI in order to identify the alternative single nucleotide polymorphism (SNP) as a result of addition, deletion, or substitution in those nitrogenous bases of the gene ITS1-ITS4 and to determine the variation at the level of One nitrogenous base SNP as shown in fig (3).

    Article Title: Diversity, growth promoting potential and anti-fungal properties of culturable endophytic bacteria isolated from Condonopsis pilosula roots
    Article Snippet: Plant growth-promoting endophytic bacteria (PGPE) play a crucial role in the growth, development, and disease resistance of medicinal plants.. However, systematic research and classification of culturable PGPE associated with Codonopsis pilosula have not been conducted.. To identify the probiotic species of C. pilosula and establish a bacterial screening library, this study employed pure culture methods to isolate PGPE from C. pilosula across various regions and seasons in Gansu.

    Article Title: Characterization of genital chlamydia amongst female sex workers in Nairobi, Kenya
    Article Snippet: Consensus DNA sequences were generated using BioEdit software v7.2 (Bioz, Los Altos, California, United States), and C. trachomatis genotype identification was done using the Basic Local Alignment Sequence Tool (BLAST) [ ] (National Center for Biotechnology Information, Bethesda, Maryland, United States).

    Article Title: Pathogens Detected in Questing Ixodes ricinus Ticks in a Mountainous Area in Greece
    Article Snippet: The nucleotide sequences were compared with respective ones available in GenBank using the National Center for Biotechnology Information (NCBI) Basic Local Alignment Sequence Tool (BLAST) search engine ( https://blast.ncbi.nlm.nih.gov/ , accessed on 5 February 2024) to identify the best match.

    Article Title: Molecular basis of FIGNL1 in dissociating RAD51 from DNA and chromatin
    Article Snippet: Vertebrate FIGNL1 or RAD51 ortholog protein sequences were retrieved from the NCBI (National Center for Biotechnology Information) database and aligned using COBALT (constraint-based multiple sequence alignment tool).

    Article Title: Microfluidic PCR and network analysis reveals complex tick-borne pathogen interactions in the tropics
    Article Snippet: Subsequently, these sequences were analysed to identify the targeted TBPs by conducting a search against the GenBank database using the Basic Local Alignment Sequence Tool (BLASTn) search engine ( http://blast.ncbi.nlm.nih.gov/Blast.cgi ) [ ] provided by the National Center for Biotechnology Information (NCBI, Bethesda, MD, USA).

    Amplification:

    Article Title: Microfluidic PCR and network analysis reveals complex tick-borne pathogen interactions in the tropics.
    Article Snippet: Subsequently, these sequences were analysed to identify the targeted TBPs by conducting a search against the GenBank database using the Basic Local Alignment Sequence Tool (BLASTn) search engine (http:// blast. ncbi. nlm. nih. gov/ Blast. cgi) [20] provided by the National Center for Biotechnology Information (NCBI, Bethesda, MD, USA).

    Article Title: One health approach to study human health risks associated with Dermanyssus gallinae mites
    Article Snippet: For analysis of the nucleotide sequences, we utilized the GenBank database via the National Center for Biotechnology Information (NCBI; Bethesda, MD), employing the Basic Local Alignment Sequence Tool (BLAST) search engine ( www.ncbi.nlm.nih.gov/blast , accessed on April 5, 2023).

    Article Title: Detection of Seed – Borne Fungal Pathogens Associated with Barley (Hordeum vulgare) Seeds and Their Bio-Control Under Laboratory Conditions
    Article Snippet: The nucleotide sequences were submitted to the Gene Bank , the level of identity of the nitrogenous base pairs sequence of the gene under study with its proven counterparts at the National Center for Biotechnology Information (NCBI) was determined through the use of the Basic Local Alignment Sequence Tool (BLAST) application or algorithm [22], The sequence of the nitrogenous bases of the genes under study was used in the BioEdit program to detect the discrepancy between the sequence of the nitrogenous bases of the gene with the comparison sequences in NCBI in order to identify the alternative single nucleotide polymorphism (SNP) as a result of addition, deletion, or substitution in those nitrogenous bases of the gene ITS1-ITS4 and to determine the variation at the level of One nitrogenous base SNP as shown in fig (3).

    Article Title: Diversity, growth promoting potential and anti-fungal properties of culturable endophytic bacteria isolated from Condonopsis pilosula roots
    Article Snippet: Plant growth-promoting endophytic bacteria (PGPE) play a crucial role in the growth, development, and disease resistance of medicinal plants.. However, systematic research and classification of culturable PGPE associated with Codonopsis pilosula have not been conducted.. To identify the probiotic species of C. pilosula and establish a bacterial screening library, this study employed pure culture methods to isolate PGPE from C. pilosula across various regions and seasons in Gansu.

    Article Title: Characterization of genital chlamydia amongst female sex workers in Nairobi, Kenya
    Article Snippet: Consensus DNA sequences were generated using BioEdit software v7.2 (Bioz, Los Altos, California, United States), and C. trachomatis genotype identification was done using the Basic Local Alignment Sequence Tool (BLAST) [ ] (National Center for Biotechnology Information, Bethesda, Maryland, United States).

    Article Title: Pathogens Detected in Questing Ixodes ricinus Ticks in a Mountainous Area in Greece
    Article Snippet: The nucleotide sequences were compared with respective ones available in GenBank using the National Center for Biotechnology Information (NCBI) Basic Local Alignment Sequence Tool (BLAST) search engine ( https://blast.ncbi.nlm.nih.gov/ , accessed on 5 February 2024) to identify the best match.

    Article Title: Molecular basis of FIGNL1 in dissociating RAD51 from DNA and chromatin
    Article Snippet: Vertebrate FIGNL1 or RAD51 ortholog protein sequences were retrieved from the NCBI (National Center for Biotechnology Information) database and aligned using COBALT (constraint-based multiple sequence alignment tool).

    Article Title: Microfluidic PCR and network analysis reveals complex tick-borne pathogen interactions in the tropics
    Article Snippet: Subsequently, these sequences were analysed to identify the targeted TBPs by conducting a search against the GenBank database using the Basic Local Alignment Sequence Tool (BLASTn) search engine ( http://blast.ncbi.nlm.nih.gov/Blast.cgi ) [ ] provided by the National Center for Biotechnology Information (NCBI, Bethesda, MD, USA).



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