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Pyrosequencing Inc bar-coded 454-pyrosequencing strategy
Bar Coded 454 Pyrosequencing Strategy, supplied by Pyrosequencing Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bar-coded+454+pyrosequencing/barcoded+454+pyrosequencing/pmc03416611-39-11-11
Average 90 stars, based on 1 article reviews
bar-coded 454-pyrosequencing strategy - by Bioz Stars, 2026-10
90/100 stars

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Article Title: Composition of bacterial and archaeal communities during landfill refuse decomposition processes.
Article Snippet: To achieve the objects, we took samples from Laogang landfill-the106 largest landfill-located in Shanghai, China and analyzed the bacterial and the archaeal 107 community compositions by a bar-coded 454 pyrosequencing approach.

Article Title: The influence of the autochthonous wastewater microbiota and gene host on the fate of invasive antibiotic resistance genes.
Article Snippet: • The fate of invasive antibiotic resistance in wastewater was studied.. • blaTEM and vanA genes present lower persistence in water than the 16S rRNA or intI1.. • The host of the gene blaTEM, but not of vanA, influenced its persistence in water.

Article Title: Long-term organic-inorganic fertilization ensures great soil productivity and bacterial diversity after natural-to-agricultural ecosystem conversion.
Article Snippet: National Engineering Research Center for Organic-based Fertilizers, Jiangsu Key Lab for Organic Waste Utilization, Nanjing Agricultural University, Nanjing 210095, P. R. China Key Laboratory of Microbial Resources Collection and Preservation, Ministry of Agriculture, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing 100081, P. R. China Hanlin College, Nanjing University of Chinese Medicine, Taizhou 225300, P. R. China Qiyang red soil experimental station, Chinese Academy of Agricultural Sciences, Qiyang 426182, P. R. China

Functional Assay:

Article Title: Proton Pump Inhibitors and Oral–Gut Microbiota: From Mechanism to Clinical Significance
Article Snippet: .. Tsuda et al. (2015) [ ] , Cross-sectional study , Total patients ( n = 45), including 12 functional dyspepsia and six GERD patients taking a PPI for more than 2 years, 27 of 45 healthy volunteers. , Matching for age , Saliva , Barcoded 454 pyrosequencing, 16S rDNA, V1-V2 , OTU number (ns) , Unweighted UniFrac distance (sig.) PCoA analysis (ns) , ns. .. Rosen et al. (2015) [ ] , Cross-sectional study , Children undergoing bronchoscopy and gastrointestinal endoscopy for chronic cough ( n = 116), 59 were receiving a PPI dose within 24 h of endoscopy. , - , Oropharyngeal swabs , Illumina Miseq sequencing, 16S rDNA, - , Shannon index (ns) , - , Increased prevalence: Butyrivibrio Increased abundance: Allobaculum, Bifidobacterium, Cloacibacterium, Janthinobacterium, Ralstonia, Rhodobacter, Rhodoferax, Streptococcus, Yersinia, and Zoogloea..

Protein-Protein interactions:

Article Title: Proton Pump Inhibitors and Oral–Gut Microbiota: From Mechanism to Clinical Significance
Article Snippet: .. Tsuda et al. (2015) [ ] , Cross-sectional study , Total patients ( n = 45), including 12 functional dyspepsia and six GERD patients taking a PPI for more than 2 years, 27 of 45 healthy volunteers. , Matching for age , Saliva , Barcoded 454 pyrosequencing, 16S rDNA, V1-V2 , OTU number (ns) , Unweighted UniFrac distance (sig.) PCoA analysis (ns) , ns. .. Rosen et al. (2015) [ ] , Cross-sectional study , Children undergoing bronchoscopy and gastrointestinal endoscopy for chronic cough ( n = 116), 59 were receiving a PPI dose within 24 h of endoscopy. , - , Oropharyngeal swabs , Illumina Miseq sequencing, 16S rDNA, - , Shannon index (ns) , - , Increased prevalence: Butyrivibrio Increased abundance: Allobaculum, Bifidobacterium, Cloacibacterium, Janthinobacterium, Ralstonia, Rhodobacter, Rhodoferax, Streptococcus, Yersinia, and Zoogloea..

Control:

Article Title: A literature review on the potential clinical implications of streptococci in gastric cancer
Article Snippet: Jo , 2016 , HP-negative control group ( n = 13), HP-positive control group ( n = 16), HP negative cancer group ( n = 19), and HP-positive cancer group ( n = 15) , Korea , Barcoded 454 Pyrosequencing of the 16S rRNA Gene , Gastric mucosal (antrum and corpus) biopsies , Streptococcus ranked second in all four groups; in the high intestinal metaplasia group, the proportion of streptococcus increased. , . .. Sohn , 2017 , HP-negative control group ( n = 2), HP-positive control group ( n = 3), HP negative cancer group ( n = 2), and HP-positive cancer group ( n = 5) , Korea , Bar-coded 454 pyrosequencing of the 16S rRNA gene , Antrum and body biopsy , The higher composition of Streptococcus pseudopneumoniae, S. parasanguinis, and S. oralis in Hp (−) cancer groups than the others, only in the body. At the family level, streptococcus accounted for the largest proportion of Hp-negative gastric cancers. , . .. Coker , 2018 , 81 patients with superficial gastritis (SG), atrophic gastritis (AG), intestinal metaplasia (IM) and gastric cancer (GC), 126 cases from inner Mongolia, China. , Xi’an and inner Mongolia China, , 16S rRNA sequencing , Gastric mucosal samples , Five GC-enriched bacterial taxa whose species identifications correspond to Peptostreptococcus stomatis, Streptococcus anginosus, Parvimonas micra, Slackia exigua and Dialister pneumosintes had significant centralities in the GC ecological network , .



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Pyrosequencing Inc bar-coded 454 pyrosequencing
The study of intragastric Streptococcus in gastric cancer.
Bar Coded 454 Pyrosequencing, supplied by Pyrosequencing Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bar-coded+454+pyrosequencing/barcoded+454+pyrosequencing/pmc09643750-10-38-39
Average 90 stars, based on 1 article reviews
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Pyrosequencing Inc bar-coded 454-pyrosequencing strategy
The study of intragastric Streptococcus in gastric cancer.
Bar Coded 454 Pyrosequencing Strategy, supplied by Pyrosequencing Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bar-coded+454+pyrosequencing/barcoded+454+pyrosequencing/pmc03416611-39-11-11
Average 90 stars, based on 1 article reviews
bar-coded 454-pyrosequencing strategy - by Bioz Stars, 2026-10
90/100 stars
  Buy from Supplier

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Pyrosequencing Inc 454 bar-coded pyrosequencing
The study of intragastric Streptococcus in gastric cancer.
454 Bar Coded Pyrosequencing, supplied by Pyrosequencing Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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454 bar-coded pyrosequencing - by Bioz Stars, 2026-10
90/100 stars
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The study of intragastric Streptococcus in gastric cancer.

Journal: Frontiers in Microbiology

Article Title: A literature review on the potential clinical implications of streptococci in gastric cancer

doi: 10.3389/fmicb.2022.1010465

Figure Lengend Snippet: The study of intragastric Streptococcus in gastric cancer.

Article Snippet: Sohn , 2017 , HP-negative control group ( n = 2), HP-positive control group ( n = 3), HP negative cancer group ( n = 2), and HP-positive cancer group ( n = 5) , Korea , Bar-coded 454 pyrosequencing of the 16S rRNA gene , Antrum and body biopsy , The higher composition of Streptococcus pseudopneumoniae, S. parasanguinis, and S. oralis in Hp (−) cancer groups than the others, only in the body. At the family level, streptococcus accounted for the largest proportion of Hp-negative gastric cancers. , .

Techniques: Isolation, Southern Blot, Sequencing, Control, Bacteria, Next-Generation Sequencing, Biomarker Discovery