annotate multiple microbial assemblies rasttk (v1.073) application (DOE Systems Biology Knowledgebase)
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DOE Systems Biology Knowledgebase
annotate multiple microbial assemblies rasttk (v1.073) application
Annotate Multiple Microbial Assemblies Rasttk (V1.073) Application, supplied by DOE Systems Biology Knowledgebase, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/application+annotate+microbial+assembly/annotate+multiple+microbial+assemblies+with+rasttk/pm38671539-112-12-13
Average 90 stars, based on 1 article reviews
Annotate Multiple Microbial Assemblies Rasttk (V1.073) Application, supplied by DOE Systems Biology Knowledgebase, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/application+annotate+microbial+assembly/annotate+multiple+microbial+assemblies+with+rasttk/pm38671539-112-12-13
Average 90 stars, based on 1 article reviews
annotate multiple microbial assemblies rasttk (v1.073) application - by Bioz Stars,
2026-11
90/100 stars
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Functional Assay:Article Title: Metagenome-assembled genomes of an acid-tolerant nitrifying bacterial community isolated from a bioreactor used in ammonium scrubbers at animal-rearing facilities Article Snippet: .. Gene calling and functional annotation were performed in Kbase with the Article Title: Metagenome-assembled genomes of an acid-tolerant nitrifying bacterial community isolated from a bioreactor used in ammonium scrubbers at animal-rearing facilities. Article Snippet: .. Gene calling and functional annotation were performed in Kbase with the RAST Test:Article Title: Metagenome-assembled genomes of an acid-tolerant nitrifying bacterial community isolated from a bioreactor used in ammonium scrubbers at animal-rearing facilities Article Snippet: .. Gene calling and functional annotation were performed in Kbase with the Article Title: Metagenome-assembled genomes of an acid-tolerant nitrifying bacterial community isolated from a bioreactor used in ammonium scrubbers at animal-rearing facilities. Article Snippet: .. Gene calling and functional annotation were performed in Kbase with the other:Article Title: Selection for oligotrophy among bacteria inhabiting host microbiomes. Article Snippet: We then annotated these 40 MAGs using the Article Title: Genomic and environmental controls on Castellaniella biogeography in an anthropogenically disturbed subsurface. Article Snippet: All genomes were annotated using the “Annotate Multiple Microbial Assemblies with RASTtk” ( Article Title: An investigation of soil and groundwater metagenomes for genes encoding soluble and particulate methane monooxygenase, toluene-4-monoxygenase, propane monooxygenase and phenol hydroxylase. Article Snippet: Soil and groundwater were investigated for the genes encoding soluble and particulate methane monooxygenase/ammonia monooxygenase (sMMO, pMMO/AMO), toluene 4-monooxygenase (T4MO), propane monooxygenase (PMO) and phenol hydroxylase (PH).. The objectives were (1) to determine which subunits were present, (2) to examine the diversity of the phylotypes associated with the biomarkers and (3) to identify which metagenome associated genomes (MAGs) contained these subunits.. All T4MO and PH subunits were annotated in the groundwater metagenomes, while few were annotated in the soil metagenomes. |