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hpa version 24 1 single cell transcriptomics dataset  (Human Protein Atlas)

 
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    Structured Review

    Human Protein Atlas hpa version 24 1 single cell transcriptomics dataset
    Hpa Version 24 1 Single Cell Transcriptomics Dataset, supplied by Human Protein Atlas, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/and+transcriptomics/data+rna+seq/pm42297981-473-31-28
    Average 86 stars, based on 1 article reviews
    hpa version 24 1 single cell transcriptomics dataset - by Bioz Stars, 2026-11
    86/100 stars

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    Related Articles

    Clinical Proteomics:

    Article Title: Plasma proteomic signatures of cellular aging predict human disease.
    Article Snippet: .. Identification of cell type-enriched plasma proteins The Human Protein Atlas single-cell RNA-seq database (Human Protein Atlas version 24.1 www.proteinatlas.org/humanproteome) was used to map the putative cell type-specific plasma proteome. ..

    Article Title: Plasma proteomic signatures of cellular aging predict human disease.
    Article Snippet: .. Nature Medicine Article https://doi.org/10.1038/s41591-026-04446-y Extended Data Fig. 1 | Identification of cell type-specific plasma proteins. (a) Z-scored gene expression of cell type-enriched plasma protein encoding genes in the Human Protein Atlas (HPA, version 24.1) single-cell transcriptomics dataset, labeled by cell type and grouped according to HPA cell type family categorizations. (b) Coverage of cell type-specific proteins across the 7,289 proteins measured by the 7k SomaScan platform. (c) Coverage of cell typespecific proteins across the 2,923 proteins measured by the 3k Olink platform. ..

    Article Title: Plasma proteomic signatures of cellular aging predict human disease.
    Article Snippet: .. Leveraging single-cell transcriptomic data in the Human Protein Atlas (Methods and Extended Data Fig. 1), we linked 60 cell types to their corresponding plasma proteins. ..

    Single Cell:

    Article Title: Plasma proteomic signatures of cellular aging predict human disease.
    Article Snippet: .. Identification of cell type-enriched plasma proteins The Human Protein Atlas single-cell RNA-seq database (Human Protein Atlas version 24.1 www.proteinatlas.org/humanproteome) was used to map the putative cell type-specific plasma proteome. ..

    Article Title: Plasma proteomic signatures of cellular aging predict human disease.
    Article Snippet: .. Nature Medicine Article https://doi.org/10.1038/s41591-026-04446-y Extended Data Fig. 2 | Enrichment profile examples of cell type-specific proteins. (a) Fold change of enriched proteins for pancreatic endocrine cells based on the Human Protein Atlas single-cell transcriptomic dataset (version 24.1): blue bars represent fold change compared to average expression across all other cell types; red bars show fold change relative to the second-highest expressing cell type. ..

    Article Title: Plasma proteomic signatures of cellular aging predict human disease.
    Article Snippet: .. Nature Medicine Article https://doi.org/10.1038/s41591-026-04446-y Extended Data Fig. 1 | Identification of cell type-specific plasma proteins. (a) Z-scored gene expression of cell type-enriched plasma protein encoding genes in the Human Protein Atlas (HPA, version 24.1) single-cell transcriptomics dataset, labeled by cell type and grouped according to HPA cell type family categorizations. (b) Coverage of cell type-specific proteins across the 7,289 proteins measured by the 7k SomaScan platform. (c) Coverage of cell typespecific proteins across the 2,923 proteins measured by the 3k Olink platform. ..

    Article Title: Neuroprotective effects of Chaihu-Longgu-Muli Decoction in an insomnia-depression comorbidity model via Galectin-3-dependent JAK2/STAT3 inhibition.
    Article Snippet: 21 Ethnopharmacological relevance: Chaihu-Longgu-Muli Decoction (CLMD) is a classical 22 Traditional Chinese Medicine (TCM) formula from the Shanghan Lun comprising Bupleureum 23 chinense DC., Os Draconis, Concha Ostreae, and the other herbs.. Traditionally used to 24 harmonize Shaoyang, calm Shen (spirit), and treat emotional disturbances and insomnia related 25 to liver qi stagnation.. 26 Aim of the study: To evaluate CLMD’s therapeutic efficacy in insomnia-depression 27 comorbidity and elucidate molecular mechanisms through bioinformatics and experimental 28 validation.

    Article Title: Plasma proteomic signatures of cellular aging predict human disease.
    Article Snippet: .. Leveraging single-cell transcriptomic data in the Human Protein Atlas (Methods and Extended Data Fig. 1), we linked 60 cell types to their corresponding plasma proteins. ..

    Article Title:
    Article Snippet: .. To test this hypothesis, we calculated median expression levels of genes up- or down-regulated by HSAN and/or 1-deoxysphingosines in different cell types of the human heart using single cell data from the Human Protein Atlas Project ( Uhlen et al., 2015 ). ..

    RNA Sequencing:

    Article Title: Plasma proteomic signatures of cellular aging predict human disease.
    Article Snippet: .. Identification of cell type-enriched plasma proteins The Human Protein Atlas single-cell RNA-seq database (Human Protein Atlas version 24.1 www.proteinatlas.org/humanproteome) was used to map the putative cell type-specific plasma proteome. ..

    Article Title: ALDH3A2-mediated fatty acid synthesis induces ferroptosis and AML drug resistance
    Article Snippet: .. Analysis of RNA sequencing (RNA-seq) results for 88 leukemia cell lines in the Human Protein Atlas website (HPA) database showed that the top 25% of cell lines with the highest ALDH3A2 expression included fifteen AML cell lines, 4 chronic myeloid leukemia (CML) cell lines, 2 pediatric acute B-lymphoblastic leukemia cell lines, and one T-lymphoblastic leukemia cell line. ..

    Expressing:

    Article Title: Plasma proteomic signatures of cellular aging predict human disease.
    Article Snippet: .. Nature Medicine Article https://doi.org/10.1038/s41591-026-04446-y Extended Data Fig. 2 | Enrichment profile examples of cell type-specific proteins. (a) Fold change of enriched proteins for pancreatic endocrine cells based on the Human Protein Atlas single-cell transcriptomic dataset (version 24.1): blue bars represent fold change compared to average expression across all other cell types; red bars show fold change relative to the second-highest expressing cell type. ..

    Article Title: ALDH3A2-mediated fatty acid synthesis induces ferroptosis and AML drug resistance
    Article Snippet: .. Analysis of RNA sequencing (RNA-seq) results for 88 leukemia cell lines in the Human Protein Atlas website (HPA) database showed that the top 25% of cell lines with the highest ALDH3A2 expression included fifteen AML cell lines, 4 chronic myeloid leukemia (CML) cell lines, 2 pediatric acute B-lymphoblastic leukemia cell lines, and one T-lymphoblastic leukemia cell line. ..

    Article Title: Neuroprotective effects of Chaihu-Longgu-Muli Decoction in an insomnia-depression comorbidity model via Galectin-3-dependent JAK2/STAT3 inhibition.
    Article Snippet: 21 Ethnopharmacological relevance: Chaihu-Longgu-Muli Decoction (CLMD) is a classical 22 Traditional Chinese Medicine (TCM) formula from the Shanghan Lun comprising Bupleureum 23 chinense DC., Os Draconis, Concha Ostreae, and the other herbs.. Traditionally used to 24 harmonize Shaoyang, calm Shen (spirit), and treat emotional disturbances and insomnia related 25 to liver qi stagnation.. 26 Aim of the study: To evaluate CLMD’s therapeutic efficacy in insomnia-depression 27 comorbidity and elucidate molecular mechanisms through bioinformatics and experimental 28 validation.

    Article Title:
    Article Snippet: .. To test this hypothesis, we calculated median expression levels of genes up- or down-regulated by HSAN and/or 1-deoxysphingosines in different cell types of the human heart using single cell data from the Human Protein Atlas Project ( Uhlen et al., 2015 ). ..

    Analysis:

    Article Title: ALDH3A2-mediated fatty acid synthesis induces ferroptosis and AML drug resistance
    Article Snippet: .. Analysis of RNA sequencing (RNA-seq) results for 88 leukemia cell lines in the Human Protein Atlas website (HPA) database showed that the top 25% of cell lines with the highest ALDH3A2 expression included fifteen AML cell lines, 4 chronic myeloid leukemia (CML) cell lines, 2 pediatric acute B-lymphoblastic leukemia cell lines, and one T-lymphoblastic leukemia cell line. ..

    Gene Expression:

    Article Title: Plasma proteomic signatures of cellular aging predict human disease.
    Article Snippet: .. Nature Medicine Article https://doi.org/10.1038/s41591-026-04446-y Extended Data Fig. 1 | Identification of cell type-specific plasma proteins. (a) Z-scored gene expression of cell type-enriched plasma protein encoding genes in the Human Protein Atlas (HPA, version 24.1) single-cell transcriptomics dataset, labeled by cell type and grouped according to HPA cell type family categorizations. (b) Coverage of cell type-specific proteins across the 7,289 proteins measured by the 7k SomaScan platform. (c) Coverage of cell typespecific proteins across the 2,923 proteins measured by the 3k Olink platform. ..

    Transcriptomics:

    Article Title: Plasma proteomic signatures of cellular aging predict human disease.
    Article Snippet: .. Nature Medicine Article https://doi.org/10.1038/s41591-026-04446-y Extended Data Fig. 1 | Identification of cell type-specific plasma proteins. (a) Z-scored gene expression of cell type-enriched plasma protein encoding genes in the Human Protein Atlas (HPA, version 24.1) single-cell transcriptomics dataset, labeled by cell type and grouped according to HPA cell type family categorizations. (b) Coverage of cell type-specific proteins across the 7,289 proteins measured by the 7k SomaScan platform. (c) Coverage of cell typespecific proteins across the 2,923 proteins measured by the 3k Olink platform. ..

    Labeling:

    Article Title: Plasma proteomic signatures of cellular aging predict human disease.
    Article Snippet: .. Nature Medicine Article https://doi.org/10.1038/s41591-026-04446-y Extended Data Fig. 1 | Identification of cell type-specific plasma proteins. (a) Z-scored gene expression of cell type-enriched plasma protein encoding genes in the Human Protein Atlas (HPA, version 24.1) single-cell transcriptomics dataset, labeled by cell type and grouped according to HPA cell type family categorizations. (b) Coverage of cell type-specific proteins across the 7,289 proteins measured by the 7k SomaScan platform. (c) Coverage of cell typespecific proteins across the 2,923 proteins measured by the 3k Olink platform. ..



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    Image Search Results


    Comprehensive comparison of scRNA-seq and spatial omics technologies in oncology.

    Journal: Frontiers in Immunology

    Article Title: Decoding the spatial logic of immune evasion in hepatocellular carcinoma: from single-cell profiling to spatial omics

    doi: 10.3389/fimmu.2026.1935648

    Figure Lengend Snippet: Comprehensive comparison of scRNA-seq and spatial omics technologies in oncology.

    Article Snippet: Sequencing-based spatial transcriptomics , Visium (10x Genomics); Stereo-seq (BGI); Slide-seq , Whole-transcriptome mapping across large tissue areas; resolution ranges from multi-cellular spots to subcellular/nanoscale platforms. , Maps tissue-scale architecture, spatial gene modules, subclonal competition zones and tumor-stroma boundaries. , Resolution-sensitivity trade-off; multi-cellular spots require deconvolution; high sequencing cost..

    Techniques: Comparison, Single Cell, Profiling, Sample Throughput, Sequencing, Spatial Transcriptomics, Tissue, Imaging, Sampling, In Situ, Transcriptomics, Functional Assay, Multiplexing, Biomarker Discovery