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    Bio-Rad algorithms imagej schneider
    Algorithms Imagej Schneider, supplied by Bio-Rad, used in various techniques. Bioz Stars score: 98/100, based on 4013 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/algorithms+imagej/CFX+Maestro+Software/pm41722047-185-241-252
    Average 98 stars, based on 4013 article reviews
    algorithms imagej schneider - by Bioz Stars, 2026-10
    98/100 stars

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    Related Articles

    Analysis:

    Article Title: Selective CB2 receptor activation attenuates neuroinflammation and preserves immune responsiveness after photothrombotic stroke.
    Article Snippet: .. ΔΔCq method was used for data analysis using CFX Maestro software (Bio-Rad Laboratories, Inc., CA, USA). .. Spontaneously immortalized (SIM-A9; CRL 3265; ATCC, VA, USA) female C57BL/6 microglial cells were cultured in DMEM/F-12 medium supplemented with 10% fetal bovine serum (heat-inactivated) and 5% horse serum (heat-inactivated).

    Article Title: Radiosensitizing Effect of Gold Nanoparticles Stabilized with Sodium Citrate and Thioglycolic Acid on MDA-MB-231 and MCF7 Breast Cancer Cells.
    Article Snippet: .. Data analysis was performed using the Delta Ct Method (2-ddCT) in (Bio-rad CFX Maestro Software v. 3.1), and gene expression levels were calculated relative to the reference gene. ..

    Article Title: Respiratory Viral Infections in Febrile Children With Lymphoreticular Malignancies: A Single-Centre Descriptive Study.
    Article Snippet: .. Amplification and data analysis were performed on the CFX96 Real‐Time PCR Detection System with CFX Maestro software (Bio‐Rad Laboratories, Inc., Hercules, CA, USA). .. Data were compiled in Microsoft Excel and analyzed using IBM SPSS v20.0.

    Maestro Software:

    Article Title: Selective CB2 receptor activation attenuates neuroinflammation and preserves immune responsiveness after photothrombotic stroke.
    Article Snippet: .. ΔΔCq method was used for data analysis using CFX Maestro software (Bio-Rad Laboratories, Inc., CA, USA). .. Spontaneously immortalized (SIM-A9; CRL 3265; ATCC, VA, USA) female C57BL/6 microglial cells were cultured in DMEM/F-12 medium supplemented with 10% fetal bovine serum (heat-inactivated) and 5% horse serum (heat-inactivated).

    Article Title: Simultaneous identification of saliva and semen by DNA methylation analysis using quantitative PCR and droplet digital PCR.
    Article Snippet: DNA methylation analysis is crucial in forensic science for age estimation, body fluid identification, and differentiating monozygotic twins.. While massively parallel sequencing (MPS) and single-base extension (SBE) are standard, they are often time-consuming and costly.. This study evaluated the feasibility of using quantitative PCR (qPCR) and droplet digital PCR (ddPCR) to identify saliva and semen.

    Article Title: Attribute Network-based Ranking (ANeR) identifies conserved translational fingerprints of M-phase.
    Article Snippet: .. Data were analysed using Bio-Rad CFX Maestro software (v4.1.2433.1219). ..

    Article Title: Cellular self-organization orchestrates ferroptosis propagation.
    Article Snippet: 30632780 Experimental models: Cell lines Human: hTERT-RPE1 cells ATCC CRL-4000; RRID: CVCL_4388 (Continued on next page) ll OPEN ACCESS e1 Cell 189, 1–17.e1–e12, December 24, 2026 Article .. REAGENT or RESOURCE SOURCE IDENTIFIER Human: HEK293T cells ATCC CRL-3216; RRID: CVCL_0063 Oligonucleotides Control siRNA Dharmacon Cat# D-001810-01 ON-TARGETplus SMARTpool siRNAs targeting SLC7A11/xCT Dharmacon Cat# L2-007612-01 ON-TARGETplus SMARTpool siRNAs targeting GPX4 Dharmacon Cat# L2-011676-01 Primer: SLC7A11/xCT Forward: 5′-ATGCAGTGGCAGTGACCTTT-3′ Genomics, Taiwan This paper Primer: SLC7A11/xCT Reverse: 5′-GGCAACAAAGATCGGAACTG-3′ Genomics, Taiwan This paper Primer: GPX4 Forward: 5′-GTGAGGCAAGACCGAAGTAAA-3′ Genomics, Taiwan This paper Primer: GPX4 Reverse: 5′-GAACTGGTTACACGGGAAGG-3′ Genomics, Taiwan This paper Primer: β-actin Forward: 5′-CACCATTGGCAATGAGCGGTTC-3′ Genomics, Taiwan This paper Primer: β-actin Reverse: 5′-AGGTCTTTGCGGATGTCCACGT-3′ Genomics, Taiwan This paper Recombinant DNA Plasmid: pCMV-VSV-G Addgene RRID: Addgene_8454 Plasmid: psPAX2 Addgene RRID: Addgene_12260 Plasmid: pLVX-mCherry-C1 Takara Bio Cat# 632561 Plasmid: pRRL-hCMV-SoNar This paper Zhao et al.45 Software and algorithms CFX Maestro software 2.3 v5.3.022.1030 Bio-Rad https://www.bio-rad.com/en-tw/product/cfx- maestro-software-for-cfx-real-time-pcrinstruments MATLAB v2024b MathWorks, Inc. https://www.mathworks.com/ R v4.4.3 R Project https://www.r-project.org/ Python v3.9.12 Python Software Foundation https://www.python.org ImageJ v1.54p Schindelin et al.46 https://imagej.net/software/fiji/ Focus LP v1.0.x Glünder https://www.gluender.de/Miscellanea/MiscTexts/ MiscExcerpts/ReadMe_FL.html Ilastik v.1.4.0 Berg et al.47 https://www.ilastik.org/ Ridge Detection v1.4.1 Wagner et al.48 https://imagej.net/plugins/ridge-detection Image Stitching v3.1.10 Preibisch et al.49 https://imagej.net/plugins/image-stitching BaSIC Peng et al.50 https://sites.imagej.net/BaSiC/ BioVoxxel v.2.6.3 Brocher51 https://imagej.net/plugins/biovoxxel-toolbox Differential Entropy v1.0.2 Ariel and Louzoun52 https://www.mathworks.com/matlabcentral/ fileexchange/105945-differential-continuousentropy-estimator StarDist Schmidt et al.53 https://imagej.net/plugins/stardist Cellpose3 v3 Stringer and Pachitariu54 https://github.com/mouseland/cellpose Cell Ranger v4.0.0 Zheng et al.55 https://www.10xgenomics.com/support/software/ cell-ranger/latest Seurat v4.3.0 Hao et al.56 https://satijalab.org/seurat/ DoubletFinder v2.0 McGinnis et al.57 https://github.com/chris-mcginnis-ucsf/ DoubletFinder SCENIC v1.1.2 Aibar et al.27 and Van de Sande et al.28 https://scenic.aertslab.org/ (Continued on next page) ll OPEN ACCESS Cell 189, 1–17.e1–e12, December 24, 2026 e2 Article .. RPE-1 cells were cultured in RPMI 1640 medium (Gibco, #11875) supplemented with 5% fetal bovine serum (FBS; VWR, VW-97068085).

    Article Title: Radiosensitizing Effect of Gold Nanoparticles Stabilized with Sodium Citrate and Thioglycolic Acid on MDA-MB-231 and MCF7 Breast Cancer Cells.
    Article Snippet: .. Data analysis was performed using the Delta Ct Method (2-ddCT) in (Bio-rad CFX Maestro Software v. 3.1), and gene expression levels were calculated relative to the reference gene. ..

    Article Title: FDXR upregulation by p63/p73 is a prognostic and therapeutic marker of adult T-cell leukemia/lymphoma.
    Article Snippet: .. PCR reactions were carried out in a CFX Opus 96 machine (Bio-Rad) under the following cycling conditions: an initial denaturation at 95 °C for 30 s, followed by 49 cycles of denaturation at 95 °C for 5 s, annealing-extension at 56 °C for 30 s. Data were analysed using Bio-Rad CFX Maestro Software v2.3. ..

    Article Title: Respiratory Viral Infections in Febrile Children With Lymphoreticular Malignancies: A Single-Centre Descriptive Study.
    Article Snippet: .. Amplification and data analysis were performed on the CFX96 Real‐Time PCR Detection System with CFX Maestro software (Bio‐Rad Laboratories, Inc., Hercules, CA, USA). .. Data were compiled in Microsoft Excel and analyzed using IBM SPSS v20.0.

    Real-time Polymerase Chain Reaction:

    Article Title: Simultaneous identification of saliva and semen by DNA methylation analysis using quantitative PCR and droplet digital PCR.
    Article Snippet: DNA methylation analysis is crucial in forensic science for age estimation, body fluid identification, and differentiating monozygotic twins.. While massively parallel sequencing (MPS) and single-base extension (SBE) are standard, they are often time-consuming and costly.. This study evaluated the feasibility of using quantitative PCR (qPCR) and droplet digital PCR (ddPCR) to identify saliva and semen.

    Article Title: Respiratory Viral Infections in Febrile Children With Lymphoreticular Malignancies: A Single-Centre Descriptive Study.
    Article Snippet: .. Amplification and data analysis were performed on the CFX96 Real‐Time PCR Detection System with CFX Maestro software (Bio‐Rad Laboratories, Inc., Hercules, CA, USA). .. Data were compiled in Microsoft Excel and analyzed using IBM SPSS v20.0.

    Control:

    Article Title: Cellular self-organization orchestrates ferroptosis propagation.
    Article Snippet: 30632780 Experimental models: Cell lines Human: hTERT-RPE1 cells ATCC CRL-4000; RRID: CVCL_4388 (Continued on next page) ll OPEN ACCESS e1 Cell 189, 1–17.e1–e12, December 24, 2026 Article .. REAGENT or RESOURCE SOURCE IDENTIFIER Human: HEK293T cells ATCC CRL-3216; RRID: CVCL_0063 Oligonucleotides Control siRNA Dharmacon Cat# D-001810-01 ON-TARGETplus SMARTpool siRNAs targeting SLC7A11/xCT Dharmacon Cat# L2-007612-01 ON-TARGETplus SMARTpool siRNAs targeting GPX4 Dharmacon Cat# L2-011676-01 Primer: SLC7A11/xCT Forward: 5′-ATGCAGTGGCAGTGACCTTT-3′ Genomics, Taiwan This paper Primer: SLC7A11/xCT Reverse: 5′-GGCAACAAAGATCGGAACTG-3′ Genomics, Taiwan This paper Primer: GPX4 Forward: 5′-GTGAGGCAAGACCGAAGTAAA-3′ Genomics, Taiwan This paper Primer: GPX4 Reverse: 5′-GAACTGGTTACACGGGAAGG-3′ Genomics, Taiwan This paper Primer: β-actin Forward: 5′-CACCATTGGCAATGAGCGGTTC-3′ Genomics, Taiwan This paper Primer: β-actin Reverse: 5′-AGGTCTTTGCGGATGTCCACGT-3′ Genomics, Taiwan This paper Recombinant DNA Plasmid: pCMV-VSV-G Addgene RRID: Addgene_8454 Plasmid: psPAX2 Addgene RRID: Addgene_12260 Plasmid: pLVX-mCherry-C1 Takara Bio Cat# 632561 Plasmid: pRRL-hCMV-SoNar This paper Zhao et al.45 Software and algorithms CFX Maestro software 2.3 v5.3.022.1030 Bio-Rad https://www.bio-rad.com/en-tw/product/cfx- maestro-software-for-cfx-real-time-pcrinstruments MATLAB v2024b MathWorks, Inc. https://www.mathworks.com/ R v4.4.3 R Project https://www.r-project.org/ Python v3.9.12 Python Software Foundation https://www.python.org ImageJ v1.54p Schindelin et al.46 https://imagej.net/software/fiji/ Focus LP v1.0.x Glünder https://www.gluender.de/Miscellanea/MiscTexts/ MiscExcerpts/ReadMe_FL.html Ilastik v.1.4.0 Berg et al.47 https://www.ilastik.org/ Ridge Detection v1.4.1 Wagner et al.48 https://imagej.net/plugins/ridge-detection Image Stitching v3.1.10 Preibisch et al.49 https://imagej.net/plugins/image-stitching BaSIC Peng et al.50 https://sites.imagej.net/BaSiC/ BioVoxxel v.2.6.3 Brocher51 https://imagej.net/plugins/biovoxxel-toolbox Differential Entropy v1.0.2 Ariel and Louzoun52 https://www.mathworks.com/matlabcentral/ fileexchange/105945-differential-continuousentropy-estimator StarDist Schmidt et al.53 https://imagej.net/plugins/stardist Cellpose3 v3 Stringer and Pachitariu54 https://github.com/mouseland/cellpose Cell Ranger v4.0.0 Zheng et al.55 https://www.10xgenomics.com/support/software/ cell-ranger/latest Seurat v4.3.0 Hao et al.56 https://satijalab.org/seurat/ DoubletFinder v2.0 McGinnis et al.57 https://github.com/chris-mcginnis-ucsf/ DoubletFinder SCENIC v1.1.2 Aibar et al.27 and Van de Sande et al.28 https://scenic.aertslab.org/ (Continued on next page) ll OPEN ACCESS Cell 189, 1–17.e1–e12, December 24, 2026 e2 Article .. RPE-1 cells were cultured in RPMI 1640 medium (Gibco, #11875) supplemented with 5% fetal bovine serum (FBS; VWR, VW-97068085).

    Recombinant:

    Article Title: Cellular self-organization orchestrates ferroptosis propagation.
    Article Snippet: 30632780 Experimental models: Cell lines Human: hTERT-RPE1 cells ATCC CRL-4000; RRID: CVCL_4388 (Continued on next page) ll OPEN ACCESS e1 Cell 189, 1–17.e1–e12, December 24, 2026 Article .. REAGENT or RESOURCE SOURCE IDENTIFIER Human: HEK293T cells ATCC CRL-3216; RRID: CVCL_0063 Oligonucleotides Control siRNA Dharmacon Cat# D-001810-01 ON-TARGETplus SMARTpool siRNAs targeting SLC7A11/xCT Dharmacon Cat# L2-007612-01 ON-TARGETplus SMARTpool siRNAs targeting GPX4 Dharmacon Cat# L2-011676-01 Primer: SLC7A11/xCT Forward: 5′-ATGCAGTGGCAGTGACCTTT-3′ Genomics, Taiwan This paper Primer: SLC7A11/xCT Reverse: 5′-GGCAACAAAGATCGGAACTG-3′ Genomics, Taiwan This paper Primer: GPX4 Forward: 5′-GTGAGGCAAGACCGAAGTAAA-3′ Genomics, Taiwan This paper Primer: GPX4 Reverse: 5′-GAACTGGTTACACGGGAAGG-3′ Genomics, Taiwan This paper Primer: β-actin Forward: 5′-CACCATTGGCAATGAGCGGTTC-3′ Genomics, Taiwan This paper Primer: β-actin Reverse: 5′-AGGTCTTTGCGGATGTCCACGT-3′ Genomics, Taiwan This paper Recombinant DNA Plasmid: pCMV-VSV-G Addgene RRID: Addgene_8454 Plasmid: psPAX2 Addgene RRID: Addgene_12260 Plasmid: pLVX-mCherry-C1 Takara Bio Cat# 632561 Plasmid: pRRL-hCMV-SoNar This paper Zhao et al.45 Software and algorithms CFX Maestro software 2.3 v5.3.022.1030 Bio-Rad https://www.bio-rad.com/en-tw/product/cfx- maestro-software-for-cfx-real-time-pcrinstruments MATLAB v2024b MathWorks, Inc. https://www.mathworks.com/ R v4.4.3 R Project https://www.r-project.org/ Python v3.9.12 Python Software Foundation https://www.python.org ImageJ v1.54p Schindelin et al.46 https://imagej.net/software/fiji/ Focus LP v1.0.x Glünder https://www.gluender.de/Miscellanea/MiscTexts/ MiscExcerpts/ReadMe_FL.html Ilastik v.1.4.0 Berg et al.47 https://www.ilastik.org/ Ridge Detection v1.4.1 Wagner et al.48 https://imagej.net/plugins/ridge-detection Image Stitching v3.1.10 Preibisch et al.49 https://imagej.net/plugins/image-stitching BaSIC Peng et al.50 https://sites.imagej.net/BaSiC/ BioVoxxel v.2.6.3 Brocher51 https://imagej.net/plugins/biovoxxel-toolbox Differential Entropy v1.0.2 Ariel and Louzoun52 https://www.mathworks.com/matlabcentral/ fileexchange/105945-differential-continuousentropy-estimator StarDist Schmidt et al.53 https://imagej.net/plugins/stardist Cellpose3 v3 Stringer and Pachitariu54 https://github.com/mouseland/cellpose Cell Ranger v4.0.0 Zheng et al.55 https://www.10xgenomics.com/support/software/ cell-ranger/latest Seurat v4.3.0 Hao et al.56 https://satijalab.org/seurat/ DoubletFinder v2.0 McGinnis et al.57 https://github.com/chris-mcginnis-ucsf/ DoubletFinder SCENIC v1.1.2 Aibar et al.27 and Van de Sande et al.28 https://scenic.aertslab.org/ (Continued on next page) ll OPEN ACCESS Cell 189, 1–17.e1–e12, December 24, 2026 e2 Article .. RPE-1 cells were cultured in RPMI 1640 medium (Gibco, #11875) supplemented with 5% fetal bovine serum (FBS; VWR, VW-97068085).

    Plasmid Preparation:

    Article Title: Cellular self-organization orchestrates ferroptosis propagation.
    Article Snippet: 30632780 Experimental models: Cell lines Human: hTERT-RPE1 cells ATCC CRL-4000; RRID: CVCL_4388 (Continued on next page) ll OPEN ACCESS e1 Cell 189, 1–17.e1–e12, December 24, 2026 Article .. REAGENT or RESOURCE SOURCE IDENTIFIER Human: HEK293T cells ATCC CRL-3216; RRID: CVCL_0063 Oligonucleotides Control siRNA Dharmacon Cat# D-001810-01 ON-TARGETplus SMARTpool siRNAs targeting SLC7A11/xCT Dharmacon Cat# L2-007612-01 ON-TARGETplus SMARTpool siRNAs targeting GPX4 Dharmacon Cat# L2-011676-01 Primer: SLC7A11/xCT Forward: 5′-ATGCAGTGGCAGTGACCTTT-3′ Genomics, Taiwan This paper Primer: SLC7A11/xCT Reverse: 5′-GGCAACAAAGATCGGAACTG-3′ Genomics, Taiwan This paper Primer: GPX4 Forward: 5′-GTGAGGCAAGACCGAAGTAAA-3′ Genomics, Taiwan This paper Primer: GPX4 Reverse: 5′-GAACTGGTTACACGGGAAGG-3′ Genomics, Taiwan This paper Primer: β-actin Forward: 5′-CACCATTGGCAATGAGCGGTTC-3′ Genomics, Taiwan This paper Primer: β-actin Reverse: 5′-AGGTCTTTGCGGATGTCCACGT-3′ Genomics, Taiwan This paper Recombinant DNA Plasmid: pCMV-VSV-G Addgene RRID: Addgene_8454 Plasmid: psPAX2 Addgene RRID: Addgene_12260 Plasmid: pLVX-mCherry-C1 Takara Bio Cat# 632561 Plasmid: pRRL-hCMV-SoNar This paper Zhao et al.45 Software and algorithms CFX Maestro software 2.3 v5.3.022.1030 Bio-Rad https://www.bio-rad.com/en-tw/product/cfx- maestro-software-for-cfx-real-time-pcrinstruments MATLAB v2024b MathWorks, Inc. https://www.mathworks.com/ R v4.4.3 R Project https://www.r-project.org/ Python v3.9.12 Python Software Foundation https://www.python.org ImageJ v1.54p Schindelin et al.46 https://imagej.net/software/fiji/ Focus LP v1.0.x Glünder https://www.gluender.de/Miscellanea/MiscTexts/ MiscExcerpts/ReadMe_FL.html Ilastik v.1.4.0 Berg et al.47 https://www.ilastik.org/ Ridge Detection v1.4.1 Wagner et al.48 https://imagej.net/plugins/ridge-detection Image Stitching v3.1.10 Preibisch et al.49 https://imagej.net/plugins/image-stitching BaSIC Peng et al.50 https://sites.imagej.net/BaSiC/ BioVoxxel v.2.6.3 Brocher51 https://imagej.net/plugins/biovoxxel-toolbox Differential Entropy v1.0.2 Ariel and Louzoun52 https://www.mathworks.com/matlabcentral/ fileexchange/105945-differential-continuousentropy-estimator StarDist Schmidt et al.53 https://imagej.net/plugins/stardist Cellpose3 v3 Stringer and Pachitariu54 https://github.com/mouseland/cellpose Cell Ranger v4.0.0 Zheng et al.55 https://www.10xgenomics.com/support/software/ cell-ranger/latest Seurat v4.3.0 Hao et al.56 https://satijalab.org/seurat/ DoubletFinder v2.0 McGinnis et al.57 https://github.com/chris-mcginnis-ucsf/ DoubletFinder SCENIC v1.1.2 Aibar et al.27 and Van de Sande et al.28 https://scenic.aertslab.org/ (Continued on next page) ll OPEN ACCESS Cell 189, 1–17.e1–e12, December 24, 2026 e2 Article .. RPE-1 cells were cultured in RPMI 1640 medium (Gibco, #11875) supplemented with 5% fetal bovine serum (FBS; VWR, VW-97068085).

    Software:

    Article Title: Cellular self-organization orchestrates ferroptosis propagation.
    Article Snippet: 30632780 Experimental models: Cell lines Human: hTERT-RPE1 cells ATCC CRL-4000; RRID: CVCL_4388 (Continued on next page) ll OPEN ACCESS e1 Cell 189, 1–17.e1–e12, December 24, 2026 Article .. REAGENT or RESOURCE SOURCE IDENTIFIER Human: HEK293T cells ATCC CRL-3216; RRID: CVCL_0063 Oligonucleotides Control siRNA Dharmacon Cat# D-001810-01 ON-TARGETplus SMARTpool siRNAs targeting SLC7A11/xCT Dharmacon Cat# L2-007612-01 ON-TARGETplus SMARTpool siRNAs targeting GPX4 Dharmacon Cat# L2-011676-01 Primer: SLC7A11/xCT Forward: 5′-ATGCAGTGGCAGTGACCTTT-3′ Genomics, Taiwan This paper Primer: SLC7A11/xCT Reverse: 5′-GGCAACAAAGATCGGAACTG-3′ Genomics, Taiwan This paper Primer: GPX4 Forward: 5′-GTGAGGCAAGACCGAAGTAAA-3′ Genomics, Taiwan This paper Primer: GPX4 Reverse: 5′-GAACTGGTTACACGGGAAGG-3′ Genomics, Taiwan This paper Primer: β-actin Forward: 5′-CACCATTGGCAATGAGCGGTTC-3′ Genomics, Taiwan This paper Primer: β-actin Reverse: 5′-AGGTCTTTGCGGATGTCCACGT-3′ Genomics, Taiwan This paper Recombinant DNA Plasmid: pCMV-VSV-G Addgene RRID: Addgene_8454 Plasmid: psPAX2 Addgene RRID: Addgene_12260 Plasmid: pLVX-mCherry-C1 Takara Bio Cat# 632561 Plasmid: pRRL-hCMV-SoNar This paper Zhao et al.45 Software and algorithms CFX Maestro software 2.3 v5.3.022.1030 Bio-Rad https://www.bio-rad.com/en-tw/product/cfx- maestro-software-for-cfx-real-time-pcrinstruments MATLAB v2024b MathWorks, Inc. https://www.mathworks.com/ R v4.4.3 R Project https://www.r-project.org/ Python v3.9.12 Python Software Foundation https://www.python.org ImageJ v1.54p Schindelin et al.46 https://imagej.net/software/fiji/ Focus LP v1.0.x Glünder https://www.gluender.de/Miscellanea/MiscTexts/ MiscExcerpts/ReadMe_FL.html Ilastik v.1.4.0 Berg et al.47 https://www.ilastik.org/ Ridge Detection v1.4.1 Wagner et al.48 https://imagej.net/plugins/ridge-detection Image Stitching v3.1.10 Preibisch et al.49 https://imagej.net/plugins/image-stitching BaSIC Peng et al.50 https://sites.imagej.net/BaSiC/ BioVoxxel v.2.6.3 Brocher51 https://imagej.net/plugins/biovoxxel-toolbox Differential Entropy v1.0.2 Ariel and Louzoun52 https://www.mathworks.com/matlabcentral/ fileexchange/105945-differential-continuousentropy-estimator StarDist Schmidt et al.53 https://imagej.net/plugins/stardist Cellpose3 v3 Stringer and Pachitariu54 https://github.com/mouseland/cellpose Cell Ranger v4.0.0 Zheng et al.55 https://www.10xgenomics.com/support/software/ cell-ranger/latest Seurat v4.3.0 Hao et al.56 https://satijalab.org/seurat/ DoubletFinder v2.0 McGinnis et al.57 https://github.com/chris-mcginnis-ucsf/ DoubletFinder SCENIC v1.1.2 Aibar et al.27 and Van de Sande et al.28 https://scenic.aertslab.org/ (Continued on next page) ll OPEN ACCESS Cell 189, 1–17.e1–e12, December 24, 2026 e2 Article .. RPE-1 cells were cultured in RPMI 1640 medium (Gibco, #11875) supplemented with 5% fetal bovine serum (FBS; VWR, VW-97068085).

    Gene Expression:

    Article Title: Radiosensitizing Effect of Gold Nanoparticles Stabilized with Sodium Citrate and Thioglycolic Acid on MDA-MB-231 and MCF7 Breast Cancer Cells.
    Article Snippet: .. Data analysis was performed using the Delta Ct Method (2-ddCT) in (Bio-rad CFX Maestro Software v. 3.1), and gene expression levels were calculated relative to the reference gene. ..

    Polymerase Chain Reaction:

    Article Title: FDXR upregulation by p63/p73 is a prognostic and therapeutic marker of adult T-cell leukemia/lymphoma.
    Article Snippet: .. PCR reactions were carried out in a CFX Opus 96 machine (Bio-Rad) under the following cycling conditions: an initial denaturation at 95 °C for 30 s, followed by 49 cycles of denaturation at 95 °C for 5 s, annealing-extension at 56 °C for 30 s. Data were analysed using Bio-Rad CFX Maestro Software v2.3. ..

    Amplification:

    Article Title: Respiratory Viral Infections in Febrile Children With Lymphoreticular Malignancies: A Single-Centre Descriptive Study.
    Article Snippet: .. Amplification and data analysis were performed on the CFX96 Real‐Time PCR Detection System with CFX Maestro software (Bio‐Rad Laboratories, Inc., Hercules, CA, USA). .. Data were compiled in Microsoft Excel and analyzed using IBM SPSS v20.0.



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