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Biomatters Ltd sequence analysis software geneious 2022.1
Sequence Analysis Software Geneious 2022.1, supplied by Biomatters Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/Alignment+Software/sequence+alignment+software+geneious/pm36009978-175-11-16
Average 90 stars, based on 1 article reviews
sequence analysis software geneious 2022.1 - by Bioz Stars, 2026-11
90/100 stars

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Article Title: Whole genome analysis of UV-induced mutagenesis in Caulobacter crescentus.
Article Snippet: UV-induced mutagenesis is, to greater extent, a phenomenon dependent on translesion synthesis (TLS) and regulated by the SOS response in bacteria.. Caulobacter crescentus, like many bacterial species, employs the ImuABC (ImuAB DnaE2) pathway in TLS.. To have a better understanding of the characteristics of UV-induced mutagenesis in this organism, we performed a whole genome analysis of mutations present in survivors after an acute UVC exposure (300 J/m2).

Article Title: Phage-Related Ribosomal Proteases (Prps): Discovery, Bioinformatics, and Structural Analysis.
Article Snippet: Both the L27 and Prp phylogenic trees were created using the sequence analysis software Geneious 2022.1 (Biomatters, Auckland, New Zealand) available for download at https://www.geneious.com (accessed on 23 June 2022).

Sequencing:

Article Title: Cross-Resistance of Succinate Dehydrogenase Inhibitors (SDHI) in <i>Botrytis cinerea</i> and Development of Molecular Diagnostic Tools for SDHI Resistance Detection
Article Snippet: Succinate dehydrogenase inhibitors (SDHIs) are keystone synthetic fungicides used to manage Botrytis cinerea in several hosts.. In this study, we investigated the cross-resistance between five new SDHIs (pyraziflumid, isofetamid, benzovindiflupyr, fluxapyroxad, and pydiflumetofen) with commonly used SDHIs boscalid and fluopyram.. Different mutations were detected in the sdhB gene in B. cinerea collected from Michigan grapes, and their frequency and EC50 value were determined.

Article Title: Novel isolates expand the physiological diversity of Prochlorococcus and illuminate its macroevolution.
Article Snippet: The average insert range for libraries constructed using a standard SMRTbell Template Prep Kit 1.0 and Sequencing Primer v3 (Pacific Biosciences) was 21–28 kb. .. Reads were assembled de novo into a single contig for each strain using the RS_HGAP_Assembly.2 protocol within the SMRT Analysis software (v2.0; Pacific Biosciences) before circulariza tion using the Geneious sequence analysis package (V7.1, Biomatters) and polishing using Quiver and the RS_Resequencing.1 protocol within the SMRT Portal software. ..

Article Title: Novel isolates expand the physiological diversity of Prochlorococcus and illuminate its macroevolution
Article Snippet: The average insert range for libraries constructed using a standard SMRTbell Template Prep Kit 1.0 and Sequencing Primer v3 (Pacific Biosciences) was 21–28 kb. .. Reads were assembled de novo into a single contig for each strain using the RS_HGAP_Assembly.2 protocol within the SMRT Analysis software (v2.0; Pacific Biosciences) before circularization using the Geneious sequence analysis package (V7.1, Biomatters) and polishing using Quiver and the RS_Resequencing.1 protocol within the SMRT Portal software. ..

Article Title: Novel Lymphocytic Choriomeningitis Virus Strain Sustains Abundant Exhausted Progenitor CD8 T Cells without Systemic Viremia.
Article Snippet: .. The Geneious Prime (2021.2.1) sequence analysis package (Biomatters Ltd.) was used to compare the sequence homology of the four coding regions (the glycoprotein [GP], viral RNA-dependent RNA polymerase [L], nucleocapsid protein [NP], and Z protein). ..

Article Title: Production of native recombinant proteins using a novel split intein affinity technology.
Article Snippet: Epichlorohydrin, salts, and other chemicals were purchased from MilliporeSigma (Burlington, MA, USA). .. Resin construction equipment: Geneious prime sequence software was used to design the NC-intein sequence and was purchased from Biomatters, Inc. (Auckland, New Zealand). ..

Article Title: Distribution of the cholinergic nuclei in the brain of the weakly electric fish, Apteronotus leptorhynchus: Implications for sensory processing.
Article Snippet: .. Nucleotide and predicted protein sequences were analyzed using the ClustalW method in Geneious sequence alignment editor (Biomatters Ltd., Auckland, New Zealand; version 5.3). ..

Software:

Article Title: Cross-Resistance of Succinate Dehydrogenase Inhibitors (SDHI) in <i>Botrytis cinerea</i> and Development of Molecular Diagnostic Tools for SDHI Resistance Detection
Article Snippet: Succinate dehydrogenase inhibitors (SDHIs) are keystone synthetic fungicides used to manage Botrytis cinerea in several hosts.. In this study, we investigated the cross-resistance between five new SDHIs (pyraziflumid, isofetamid, benzovindiflupyr, fluxapyroxad, and pydiflumetofen) with commonly used SDHIs boscalid and fluopyram.. Different mutations were detected in the sdhB gene in B. cinerea collected from Michigan grapes, and their frequency and EC50 value were determined.

Article Title: Novel isolates expand the physiological diversity of Prochlorococcus and illuminate its macroevolution.
Article Snippet: The average insert range for libraries constructed using a standard SMRTbell Template Prep Kit 1.0 and Sequencing Primer v3 (Pacific Biosciences) was 21–28 kb. .. Reads were assembled de novo into a single contig for each strain using the RS_HGAP_Assembly.2 protocol within the SMRT Analysis software (v2.0; Pacific Biosciences) before circulariza tion using the Geneious sequence analysis package (V7.1, Biomatters) and polishing using Quiver and the RS_Resequencing.1 protocol within the SMRT Portal software. ..

Article Title: Novel isolates expand the physiological diversity of Prochlorococcus and illuminate its macroevolution
Article Snippet: The average insert range for libraries constructed using a standard SMRTbell Template Prep Kit 1.0 and Sequencing Primer v3 (Pacific Biosciences) was 21–28 kb. .. Reads were assembled de novo into a single contig for each strain using the RS_HGAP_Assembly.2 protocol within the SMRT Analysis software (v2.0; Pacific Biosciences) before circularization using the Geneious sequence analysis package (V7.1, Biomatters) and polishing using Quiver and the RS_Resequencing.1 protocol within the SMRT Portal software. ..

Article Title: Production of native recombinant proteins using a novel split intein affinity technology.
Article Snippet: Epichlorohydrin, salts, and other chemicals were purchased from MilliporeSigma (Burlington, MA, USA). .. Resin construction equipment: Geneious prime sequence software was used to design the NC-intein sequence and was purchased from Biomatters, Inc. (Auckland, New Zealand). ..



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