align-x 5.5 (substitution matrix = blosum 80; gap-opening penalty = 10; gap-extension penalty = 0.05) (InforMax Inc)
90
Structured Review
InforMax Inc
align-x 5.5 (substitution matrix = blosum 80; gap-opening penalty = 10; gap-extension penalty = 0.05)
Align X 5.5 (Substitution Matrix = Blosum 80; Gap Opening Penalty = 10; Gap Extension Penalty = 0.05), supplied by InforMax Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/Alignment+Software/align+x+software/pmc00014680-39-43-15
Average 90 stars, based on 1 article reviews
Align X 5.5 (Substitution Matrix = Blosum 80; Gap Opening Penalty = 10; Gap Extension Penalty = 0.05), supplied by InforMax Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/Alignment+Software/align+x+software/pmc00014680-39-43-15
Average 90 stars, based on 1 article reviews
align-x 5.5 (substitution matrix = blosum 80; gap-opening penalty = 10; gap-extension penalty = 0.05) - by Bioz Stars,
2026-09
90/100 stars
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Sequencing:Article Title: Elg1 forms an alternative PCNA-interacting RFC complex required to maintain genome stability. Article Snippet: .. Multiple sequence alignment was generated by using the Generated:Article Title: Elg1 forms an alternative PCNA-interacting RFC complex required to maintain genome stability. Article Snippet: .. Multiple sequence alignment was generated by using the Software:Article Title: Elg1 forms an alternative PCNA-interacting RFC complex required to maintain genome stability. Article Snippet: .. Multiple sequence alignment was generated by using the Article Title: Properties of recombinant 4-α-glucanotransferase from Bifidobacterium longum subsp. longum JCM 1217 and its application Article Snippet: .. The alignment was analyzed using Article Title: Characterization and Application of BiLA, a Psychrophilic α-Amylase from Bifidobacterium longum. Article Snippet: Journal of Agricultural and Food Chemistry is published by the American Chemical Society.. 1155 Sixteenth Street N.W., Washington, DC 20036 Published by American Chemical Society.. Copyright © American Chemical Society. Article Title: A beta-1,3-galactosyltransferase and brainiac/bre5 homolog expressed in the midgut did not contribute to a Cry1Ab toxin resistance trait in Ostrinia nubilalis. Article Snippet: Post-translational glycosylation of midgut epithelial protein and lipid receptors may be required prior to binding of activated Bacillus thuringiensis (Bt) Cry toxins.. A 931 bp cDNA encoding a putative 297-residue b-1,3-galactosyltransferase (b3GalT5) was cloned from larval Ostrinia nubilalis midgut tissue, and showed homology to Drosophila brainiac (brn) and Caenorhabditis elegans bre5 proteins.. Single nucleotide polymorphisms (SNPs) were detected in coding and promoter regions of O. nubilalis b3GalT5 (Onb3GalT5), of which 3 of 31 CDS SNPs were non-synonymous. Article Title: Experimental infection of pregnant goats with bovine viral diarrhea virus (BVDV) 1 or 2 Article Snippet: If positive for BVDV, samples were purified using the QIAquick® PCR purification kit (Qiagen) according to the manufacturer’s specifications and sequenced by automated dye terminator nucleotide sequencing using both the 5’ and 3’ primers (BVD 180 and HCV 368, respectively). .. Consensus sequences were determined for each sample using Article Title: Sequence variation in the cadherin gene of Ostrinia nubilalis: a tool for field monitoring. Article Snippet: Toxin-binding proteins of insect midgut epithelial cells are associated with insect resistance to Bacillus thuringiensis (Bt) Cry toxins.. A 5378 nt cDNA encoding a 1717 amino acid putative midgut cadherin-like glycoprotein and candidate Cry1Ab toxinbinding protein was characterized from Ostrinia nubilalis.. Intraspecific alignment of partial O. nubilalis cadherin gene sequences identified variance within proposed Cry1A toxin binding region 2 (TBR2), IPLQTSILVVT[I/V] N, and flanking Cry1A toxin binding region 1 (TBR1), DIEIEIIDTNN. other:Article Title: Noncytopathic bovine viral diarrhea virus can persist in testicular tissue after vaccination of peri-pubertal bulls but prevents subsequent infection. Article Snippet: The objectives of this research were to evaluate the risk of prolonged testicular infection as a consequence of vaccination of peri-pubertal ulls with a modified-live, noncytopathic strain of BVDV and to assess vaccine efficacy in preventing prolonged testicular infections after subsequent acute infection.. Seronegative, peri-pubertal bulls were vaccinated subcutaneously with an approximate minimum immunizing ose or a 10× standard dose of modified-live, noncytopathic BVDV or were maintained as unvaccinated controls.. Forty-nine days after accination, all bulls were intranasally inoculated with a noncytopathic field strain of BVDV. Isolation:Article Title: A beta-1,3-galactosyltransferase and brainiac/bre5 homolog expressed in the midgut did not contribute to a Cry1Ab toxin resistance trait in Ostrinia nubilalis. Article Snippet: Post-translational glycosylation of midgut epithelial protein and lipid receptors may be required prior to binding of activated Bacillus thuringiensis (Bt) Cry toxins.. A 931 bp cDNA encoding a putative 297-residue b-1,3-galactosyltransferase (b3GalT5) was cloned from larval Ostrinia nubilalis midgut tissue, and showed homology to Drosophila brainiac (brn) and Caenorhabditis elegans bre5 proteins.. Single nucleotide polymorphisms (SNPs) were detected in coding and promoter regions of O. nubilalis b3GalT5 (Onb3GalT5), of which 3 of 31 CDS SNPs were non-synonymous. Residue:Article Title: Sequence variation in the cadherin gene of Ostrinia nubilalis: a tool for field monitoring. Article Snippet: Toxin-binding proteins of insect midgut epithelial cells are associated with insect resistance to Bacillus thuringiensis (Bt) Cry toxins.. A 5378 nt cDNA encoding a 1717 amino acid putative midgut cadherin-like glycoprotein and candidate Cry1Ab toxinbinding protein was characterized from Ostrinia nubilalis.. Intraspecific alignment of partial O. nubilalis cadherin gene sequences identified variance within proposed Cry1A toxin binding region 2 (TBR2), IPLQTSILVVT[I/V] N, and flanking Cry1A toxin binding region 1 (TBR1), DIEIEIIDTNN. Construct:Article Title: Sequence variation in the cadherin gene of Ostrinia nubilalis: a tool for field monitoring. Article Snippet: Toxin-binding proteins of insect midgut epithelial cells are associated with insect resistance to Bacillus thuringiensis (Bt) Cry toxins.. A 5378 nt cDNA encoding a 1717 amino acid putative midgut cadherin-like glycoprotein and candidate Cry1Ab toxinbinding protein was characterized from Ostrinia nubilalis.. Intraspecific alignment of partial O. nubilalis cadherin gene sequences identified variance within proposed Cry1A toxin binding region 2 (TBR2), IPLQTSILVVT[I/V] N, and flanking Cry1A toxin binding region 1 (TBR1), DIEIEIIDTNN. |