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7.1 sequence analysis software  (DNASTAR)


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    Structured Review

    DNASTAR 7.1 sequence analysis software
    7.1 Sequence Analysis Software, supplied by DNASTAR, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/7%2E1+sequence+analysis+software/6+1+sequence+analysis+software/pmc07077296-33-10-9
    Average 90 stars, based on 1 article reviews
    7.1 sequence analysis software - by Bioz Stars, 2026-11
    90/100 stars

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    Related Articles

    Sequencing:

    Article Title: Influence of 16S ribosomal RNA gene polymerase chain reaction and sequencing on antibiotic management of bone and joint infections
    Article Snippet: Sequencing was conducted using BigDye Terminator chemistry on an ABI 3130xL DNA Sequencer (Applied BioSystems, Canada) at York University (Toronto, Ontario). .. Sequence analysis was performed using Lasergene 7.1 Sequence Analysis Software (DNAStar, USA). ..

    Article Title: Resistance to the SDHI Fungicides Boscalid and Fluopyram in Podosphaera xanthii Populations from Commercial Cucurbit Fields in Spain
    Article Snippet: The amplified fragments were visualized in a 1% agarose gel stained with RedSafe (iNtRON, Burlington, MA, USA) and purified with a GFX PCR DNA and Gel Band Purification Kit (VWR, Barcelona, Spain). .. All the amplicons were sequenced by StabVida (Lisbon, Portugal), and the sequences were aligned using DNASTAR 7 computer sequence analysis software. ..

    Article Title: Upregulation of the gluconeogenesis pathway was observed by Kluyveromyces marxianus KDH1, mitigating glucose catabolite repression
    Article Snippet: Kluyveromyces marxianus was engineered to mitigate carbon catabolite repression to efficient co-fermenting mixed sugars, which are primary components of cellulosic biomass.. Kluyveromyces marxianus KDH1 produced ethanol with 0.42 ± 0.01 g/g yield, and 0.67 ± 0.00 g/L·h productivity for 48 h. RNA sequencing-based transcriptomic analysis showed that genes from the glycolysis pathway, gluconeogenesis pathway, and the citric acid cycle were primarily upregulated when K. marxianus KDH1 fermented mixed sugars.. Furthermore, critical genes from the gluconeogenesis pathway, such as fructose-1,6-bisphosphatase and phosphoenolpyruvate carboxykinase, were upregulated by 331.72 and 47.15-fold, respectively.

    Article Title: Isolation and full-genome sequence of two reticuloendotheliosis virus strains from mixed infections with Marek's disease virus in China.
    Article Snippet: Reticuloendotheliosis virus (REV), classified as a gammaretrovirus, has a variety of hosts, including chickens, ducks, geese, turkeys, and wild birds.. REV causes a series of pathological syndromes, especially the immunosuppression of the host, which may lead to an increased susceptibility to other pathogens, thus greatly damaging the poultry industry.. Mixed infections of REV and Marek’s disease virus (MDV) have been reported in many countries, including China.

    Software:

    Article Title: Influence of 16S ribosomal RNA gene polymerase chain reaction and sequencing on antibiotic management of bone and joint infections
    Article Snippet: Sequencing was conducted using BigDye Terminator chemistry on an ABI 3130xL DNA Sequencer (Applied BioSystems, Canada) at York University (Toronto, Ontario). .. Sequence analysis was performed using Lasergene 7.1 Sequence Analysis Software (DNAStar, USA). ..

    Article Title: Resistance to the SDHI Fungicides Boscalid and Fluopyram in Podosphaera xanthii Populations from Commercial Cucurbit Fields in Spain
    Article Snippet: The amplified fragments were visualized in a 1% agarose gel stained with RedSafe (iNtRON, Burlington, MA, USA) and purified with a GFX PCR DNA and Gel Band Purification Kit (VWR, Barcelona, Spain). .. All the amplicons were sequenced by StabVida (Lisbon, Portugal), and the sequences were aligned using DNASTAR 7 computer sequence analysis software. ..

    Article Title: Upregulation of the gluconeogenesis pathway was observed by Kluyveromyces marxianus KDH1, mitigating glucose catabolite repression
    Article Snippet: Kluyveromyces marxianus was engineered to mitigate carbon catabolite repression to efficient co-fermenting mixed sugars, which are primary components of cellulosic biomass.. Kluyveromyces marxianus KDH1 produced ethanol with 0.42 ± 0.01 g/g yield, and 0.67 ± 0.00 g/L·h productivity for 48 h. RNA sequencing-based transcriptomic analysis showed that genes from the glycolysis pathway, gluconeogenesis pathway, and the citric acid cycle were primarily upregulated when K. marxianus KDH1 fermented mixed sugars.. Furthermore, critical genes from the gluconeogenesis pathway, such as fructose-1,6-bisphosphatase and phosphoenolpyruvate carboxykinase, were upregulated by 331.72 and 47.15-fold, respectively.

    Article Title: Isolation and full-genome sequence of two reticuloendotheliosis virus strains from mixed infections with Marek's disease virus in China.
    Article Snippet: Reticuloendotheliosis virus (REV), classified as a gammaretrovirus, has a variety of hosts, including chickens, ducks, geese, turkeys, and wild birds.. REV causes a series of pathological syndromes, especially the immunosuppression of the host, which may lead to an increased susceptibility to other pathogens, thus greatly damaging the poultry industry.. Mixed infections of REV and Marek’s disease virus (MDV) have been reported in many countries, including China.

    other:

    Article Title: Research Note: Genetic characterization of novel duck reoviruses from Shandong Province, China in 2022.
    Article Snippet: The sequencing results were spliced and assembled using DNASTAR 7.1 nucleotide sequence software and compared to the whole genome sequence of avian reovirus available in GenBank (http://www.ncbi.nlm.nih.gov/gorf/gorf.html).

    Article Title: Research Note: Genetic characterization of novel duck reoviruses from Shandong Province, China in 2022
    Article Snippet: The sequencing results were spliced and assembled using DNASTAR 7.1 nucleotide sequence software and compared to the whole genome sequence of avian reovirus available in GenBank ( http://www.ncbi.nlm.nih.gov/gorf/gorf.html ).

    Article Title: Selective Reactivity of Anti-Japanese Encephalitis Virus NS4B Antibody Towards Different Flaviviruses
    Article Snippet: Analysis of the plasmid DNA sequence was performed using DNASTAR Lasergene 7.1 Sequence Analysis software (Madison, WI, USA).

    Article Title: Corynebacterium tuberculostearicum : a Potentially Misidentified and Multiresistant Corynebacterium Species Isolated from Clinical Specimens
    Article Snippet: Comparative analysis of the partial 16S rRNA gene sequences of 18 C. tuberculostearicum strains was performed with the MegAlign 6.1 sequence analysis software (Lasergene; DNAStar, Madison, WI) by ClustalW analysis.

    Clone Assay:

    Article Title: Upregulation of the gluconeogenesis pathway was observed by Kluyveromyces marxianus KDH1, mitigating glucose catabolite repression
    Article Snippet: Kluyveromyces marxianus was engineered to mitigate carbon catabolite repression to efficient co-fermenting mixed sugars, which are primary components of cellulosic biomass.. Kluyveromyces marxianus KDH1 produced ethanol with 0.42 ± 0.01 g/g yield, and 0.67 ± 0.00 g/L·h productivity for 48 h. RNA sequencing-based transcriptomic analysis showed that genes from the glycolysis pathway, gluconeogenesis pathway, and the citric acid cycle were primarily upregulated when K. marxianus KDH1 fermented mixed sugars.. Furthermore, critical genes from the gluconeogenesis pathway, such as fructose-1,6-bisphosphatase and phosphoenolpyruvate carboxykinase, were upregulated by 331.72 and 47.15-fold, respectively.

    Plasmid Preparation:

    Article Title: Upregulation of the gluconeogenesis pathway was observed by Kluyveromyces marxianus KDH1, mitigating glucose catabolite repression
    Article Snippet: Kluyveromyces marxianus was engineered to mitigate carbon catabolite repression to efficient co-fermenting mixed sugars, which are primary components of cellulosic biomass.. Kluyveromyces marxianus KDH1 produced ethanol with 0.42 ± 0.01 g/g yield, and 0.67 ± 0.00 g/L·h productivity for 48 h. RNA sequencing-based transcriptomic analysis showed that genes from the glycolysis pathway, gluconeogenesis pathway, and the citric acid cycle were primarily upregulated when K. marxianus KDH1 fermented mixed sugars.. Furthermore, critical genes from the gluconeogenesis pathway, such as fructose-1,6-bisphosphatase and phosphoenolpyruvate carboxykinase, were upregulated by 331.72 and 47.15-fold, respectively.

    Polymerase Chain Reaction:

    Article Title: Isolation and full-genome sequence of two reticuloendotheliosis virus strains from mixed infections with Marek's disease virus in China.
    Article Snippet: Reticuloendotheliosis virus (REV), classified as a gammaretrovirus, has a variety of hosts, including chickens, ducks, geese, turkeys, and wild birds.. REV causes a series of pathological syndromes, especially the immunosuppression of the host, which may lead to an increased susceptibility to other pathogens, thus greatly damaging the poultry industry.. Mixed infections of REV and Marek’s disease virus (MDV) have been reported in many countries, including China.



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