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3d surface rendering  (Oxford Instruments)


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    Structured Review

    Oxford Instruments 3d surface rendering
    Conversion of ND2 files to IMS files Double-click image to automatically convert files to.ims format <t>for</t> <t>Imaris.</t> ND2 files will have the white <t>3D</t> box and right-pointing arrow icons in the lower left corner. IMS files will have the 3D box icon in the lower left corner.
    3d Surface Rendering, supplied by Oxford Instruments, used in various techniques. Bioz Stars score: 99/100, based on 44185 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/3d+rendering/Imaris/pmc13084399-407-22-26
    Average 99 stars, based on 44185 article reviews
    3d surface rendering - by Bioz Stars, 2026-09
    99/100 stars

    Images

    1) Product Images from "Protocol to study synapse density or volume—SynDOVE—in brain using confocal microscopy and Imaris three-dimensional surface rendering software"

    Article Title: Protocol to study synapse density or volume—SynDOVE—in brain using confocal microscopy and Imaris three-dimensional surface rendering software

    Journal: STAR Protocols

    doi: 10.1016/j.xpro.2026.104465

    Conversion of ND2 files to IMS files Double-click image to automatically convert files to.ims format for Imaris. ND2 files will have the white 3D box and right-pointing arrow icons in the lower left corner. IMS files will have the 3D box icon in the lower left corner.
    Figure Legend Snippet: Conversion of ND2 files to IMS files Double-click image to automatically convert files to.ims format for Imaris. ND2 files will have the white 3D box and right-pointing arrow icons in the lower left corner. IMS files will have the 3D box icon in the lower left corner.

    Techniques Used:

    Related Articles

    Staining:

    Article Title: Disrupted glial metabolism and myelin vulnerability in a mouse model of glucose transporter type 1 deficiency syndrome.
    Article Snippet: slipped using FluorSave TM reagent (Millipore). Imaging was performed using a NI-E Spinning disk microscope with a Nikon 20x objective. GFAP-, S100β-, OLIG2- and ASPA-positive cells were counted using Imaris software (version 10.2.0, Oxford Instruments) or ImageJ (version 1.53t) with automated, supervised counting. The number of positive cells was divided by the volume of striatum analyzed and expr

    Imaging:

    Article Title: Disrupted glial metabolism and myelin vulnerability in a mouse model of glucose transporter type 1 deficiency syndrome.
    Article Snippet: slipped using FluorSave TM reagent (Millipore). Imaging was performed using a NI-E Spinning disk microscope with a Nikon 20x objective. GFAP-, S100β-, OLIG2- and ASPA-positive cells were counted using Imaris software (version 10.2.0, Oxford Instruments) or ImageJ (version 1.53t) with automated, supervised counting. The number of positive cells was divided by the volume of striatum analyzed and expr

    Generated:

    Article Title: Disrupted glial metabolism and myelin vulnerability in a mouse model of glucose transporter type 1 deficiency syndrome.
    Article Snippet: slipped using FluorSave TM reagent (Millipore). Imaging was performed using a NI-E Spinning disk microscope with a Nikon 20x objective. GFAP-, S100β-, OLIG2- and ASPA-positive cells were counted using Imaris software (version 10.2.0, Oxford Instruments) or ImageJ (version 1.53t) with automated, supervised counting. The number of positive cells was divided by the volume of striatum analyzed and expr

    Microscopy:

    Article Title: Disrupted glial metabolism and myelin vulnerability in a mouse model of glucose transporter type 1 deficiency syndrome.
    Article Snippet: slipped using FluorSave TM reagent (Millipore). Imaging was performed using a NI-E Spinning disk microscope with a Nikon 20x objective. GFAP-, S100β-, OLIG2- and ASPA-positive cells were counted using Imaris software (version 10.2.0, Oxford Instruments) or ImageJ (version 1.53t) with automated, supervised counting. The number of positive cells was divided by the volume of striatum analyzed and expr

    Fluorsave:

    Article Title: Disrupted glial metabolism and myelin vulnerability in a mouse model of glucose transporter type 1 deficiency syndrome.
    Article Snippet: slipped using FluorSave TM reagent (Millipore). Imaging was performed using a NI-E Spinning disk microscope with a Nikon 20x objective. GFAP-, S100β-, OLIG2- and ASPA-positive cells were counted using Imaris software (version 10.2.0, Oxford Instruments) or ImageJ (version 1.53t) with automated, supervised counting. The number of positive cells was divided by the volume of striatum analyzed and expr

    Software:

    Article Title: Disrupted glial metabolism and myelin vulnerability in a mouse model of glucose transporter type 1 deficiency syndrome.
    Article Snippet: slipped using FluorSave TM reagent (Millipore). Imaging was performed using a NI-E Spinning disk microscope with a Nikon 20x objective. GFAP-, S100β-, OLIG2- and ASPA-positive cells were counted using Imaris software (version 10.2.0, Oxford Instruments) or ImageJ (version 1.53t) with automated, supervised counting. The number of positive cells was divided by the volume of striatum analyzed and expr

    Incubation:

    Article Title: Disrupted glial metabolism and myelin vulnerability in a mouse model of glucose transporter type 1 deficiency syndrome.
    Article Snippet: slipped using FluorSave TM reagent (Millipore). Imaging was performed using a NI-E Spinning disk microscope with a Nikon 20x objective. GFAP-, S100β-, OLIG2- and ASPA-positive cells were counted using Imaris software (version 10.2.0, Oxford Instruments) or ImageJ (version 1.53t) with automated, supervised counting. The number of positive cells was divided by the volume of striatum analyzed and expr

    Fluorescence:

    Article Title: Disrupted glial metabolism and myelin vulnerability in a mouse model of glucose transporter type 1 deficiency syndrome.
    Article Snippet: slipped using FluorSave TM reagent (Millipore). Imaging was performed using a NI-E Spinning disk microscope with a Nikon 20x objective. GFAP-, S100β-, OLIG2- and ASPA-positive cells were counted using Imaris software (version 10.2.0, Oxford Instruments) or ImageJ (version 1.53t) with automated, supervised counting. The number of positive cells was divided by the volume of striatum analyzed and expr

    Mass Cytometry:

    Article Title: Disrupted glial metabolism and myelin vulnerability in a mouse model of glucose transporter type 1 deficiency syndrome.
    Article Snippet: slipped using FluorSave TM reagent (Millipore). Imaging was performed using a NI-E Spinning disk microscope with a Nikon 20x objective. GFAP-, S100β-, OLIG2- and ASPA-positive cells were counted using Imaris software (version 10.2.0, Oxford Instruments) or ImageJ (version 1.53t) with automated, supervised counting. The number of positive cells was divided by the volume of striatum analyzed and expr

    Cytometry:

    Article Title: Disrupted glial metabolism and myelin vulnerability in a mouse model of glucose transporter type 1 deficiency syndrome.
    Article Snippet: slipped using FluorSave TM reagent (Millipore). Imaging was performed using a NI-E Spinning disk microscope with a Nikon 20x objective. GFAP-, S100β-, OLIG2- and ASPA-positive cells were counted using Imaris software (version 10.2.0, Oxford Instruments) or ImageJ (version 1.53t) with automated, supervised counting. The number of positive cells was divided by the volume of striatum analyzed and expr

    Protease Inhibitor:

    Article Title: Disrupted glial metabolism and myelin vulnerability in a mouse model of glucose transporter type 1 deficiency syndrome.
    Article Snippet: slipped using FluorSave TM reagent (Millipore). Imaging was performed using a NI-E Spinning disk microscope with a Nikon 20x objective. GFAP-, S100β-, OLIG2- and ASPA-positive cells were counted using Imaris software (version 10.2.0, Oxford Instruments) or ImageJ (version 1.53t) with automated, supervised counting. The number of positive cells was divided by the volume of striatum analyzed and expr



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    Image Search Results


    Conversion of ND2 files to IMS files Double-click image to automatically convert files to.ims format for Imaris. ND2 files will have the white 3D box and right-pointing arrow icons in the lower left corner. IMS files will have the 3D box icon in the lower left corner.

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    Article Title: Protocol to study synapse density or volume—SynDOVE—in brain using confocal microscopy and Imaris three-dimensional surface rendering software

    doi: 10.1016/j.xpro.2026.104465

    Figure Lengend Snippet: Conversion of ND2 files to IMS files Double-click image to automatically convert files to.ims format for Imaris. ND2 files will have the white 3D box and right-pointing arrow icons in the lower left corner. IMS files will have the 3D box icon in the lower left corner.

    Article Snippet: • Below is a table ( ) that summarizes the recommended minimum image acquisition parameters for puncta detection and surface segmentation during 3D surface rendering in Imaris.

    Techniques: