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    DNASTAR 755 allele specific sequence templates
    755 Allele Specific Sequence Templates, supplied by DNASTAR, used in various techniques. Bioz Stars score: 99/100, based on 11 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/755 allele specific sequence templates/product/DNASTAR
    Average 99 stars, based on 11 article reviews
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    755 allele specific sequence templates - by Bioz Stars, 2019-05
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    93
    Qiagen qiaseq targeted rna panel
    Qiaseq Targeted Rna Panel, supplied by Qiagen, used in various techniques. Bioz Stars score: 93/100, based on 5 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/qiaseq targeted rna panel/product/Qiagen
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    qiaseq targeted rna panel - by Bioz Stars, 2019-05
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    98
    Illumina Inc next gen sequencing ngs
    Next Gen Sequencing Ngs, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 98/100, based on 111 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/next gen sequencing ngs/product/Illumina Inc
    Average 98 stars, based on 111 article reviews
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    next gen sequencing ngs - by Bioz Stars, 2019-05
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    80
    Roche next gen sequencing ngs platform
    Next Gen Sequencing Ngs Platform, supplied by Roche, used in various techniques. Bioz Stars score: 80/100, based on 5 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    next gen sequencing ngs platform - by Bioz Stars, 2019-05
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    99
    DNASTAR seqman ngen v4 1 0 software
    The relationship between k -mer size and the mean number of assembled chimeric toxins (triangles), good toxins (circles), and nontoxins (squares) across eleven snake venom transcriptomes showed the conflict between assembling nontoxins and toxins. Nontoxin values are based on the number of “complete and single copy” loci detected by BUSCO analysis divided by 100 to place them on a comparable scale with the toxin loci. The <t>SeqMan</t> <t>NGen</t> results were excluded from this analysis because it lacks a defined k -mer value analogous to the other methods.
    Seqman Ngen V4 1 0 Software, supplied by DNASTAR, used in various techniques. Bioz Stars score: 99/100, based on 94 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/seqman ngen v4 1 0 software/product/DNASTAR
    Average 99 stars, based on 94 article reviews
    Price from $9.99 to $1999.99
    seqman ngen v4 1 0 software - by Bioz Stars, 2019-05
    99/100 stars
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    The relationship between k -mer size and the mean number of assembled chimeric toxins (triangles), good toxins (circles), and nontoxins (squares) across eleven snake venom transcriptomes showed the conflict between assembling nontoxins and toxins. Nontoxin values are based on the number of “complete and single copy” loci detected by BUSCO analysis divided by 100 to place them on a comparable scale with the toxin loci. The SeqMan NGen results were excluded from this analysis because it lacks a defined k -mer value analogous to the other methods.

    Journal: Toxins

    Article Title: Evaluating the Performance of De Novo Assembly Methods for Venom-Gland Transcriptomics

    doi: 10.3390/toxins10060249

    Figure Lengend Snippet: The relationship between k -mer size and the mean number of assembled chimeric toxins (triangles), good toxins (circles), and nontoxins (squares) across eleven snake venom transcriptomes showed the conflict between assembling nontoxins and toxins. Nontoxin values are based on the number of “complete and single copy” loci detected by BUSCO analysis divided by 100 to place them on a comparable scale with the toxin loci. The SeqMan NGen results were excluded from this analysis because it lacks a defined k -mer value analogous to the other methods.

    Article Snippet: Additionally, we employed SeqMan NGen v. 14 (DNAStar, Inc., Madison, WI, USA; NGen14), which is also a non-de Bruijn graph method based on proprietary algorithms.

    Techniques: