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Phylogenetic tree based on the HA gene (The length of the gene fragment was 1683 bp, ATG nt~TAA nt). The tree was generated by neighbor-joining method using <t>MEGAX</t> <t>software.</t> Phylogenetic trees were based on the comparison of nucleotide sequences of the H9N2 AIVs isolated in this study to the reference AIV sequences published in GenBank. All of those isolates were presented in black circles, in which post-2013 isolates and pre-2013 isolates were highlighted in red and green, respectively. The scale bar represents the distance unit between sequence pairs.
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Phylogenetic tree based on the HA gene (The length of the gene fragment was 1683 bp, ATG nt~TAA nt). The tree was generated by neighbor-joining method using <t>MEGAX</t> <t>software.</t> Phylogenetic trees were based on the comparison of nucleotide sequences of the H9N2 AIVs isolated in this study to the reference AIV sequences published in GenBank. All of those isolates were presented in black circles, in which post-2013 isolates and pre-2013 isolates were highlighted in red and green, respectively. The scale bar represents the distance unit between sequence pairs.
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Phylogenetic tree based on the HA gene (The length of the gene fragment was 1683 bp, ATG nt~TAA nt). The tree was generated by neighbor-joining method using MEGAX software. Phylogenetic trees were based on the comparison of nucleotide sequences of the H9N2 AIVs isolated in this study to the reference AIV sequences published in GenBank. All of those isolates were presented in black circles, in which post-2013 isolates and pre-2013 isolates were highlighted in red and green, respectively. The scale bar represents the distance unit between sequence pairs.

Journal: Transboundary and Emerging Diseases

Article Title: Diversity of the H9N2 Avian Influenza Virus in Shandong Province, China

doi: 10.1155/tbed/1432483

Figure Lengend Snippet: Phylogenetic tree based on the HA gene (The length of the gene fragment was 1683 bp, ATG nt~TAA nt). The tree was generated by neighbor-joining method using MEGAX software. Phylogenetic trees were based on the comparison of nucleotide sequences of the H9N2 AIVs isolated in this study to the reference AIV sequences published in GenBank. All of those isolates were presented in black circles, in which post-2013 isolates and pre-2013 isolates were highlighted in red and green, respectively. The scale bar represents the distance unit between sequence pairs.

Article Snippet: MEGAX software was employed to perform phylogenetic analysis for each gene segment together with the reference strain, and DNASTAR MegAlign software was used to analyze key amino acid sites.

Techniques: Generated, Software, Comparison, Isolation, Sequencing

Phylogenetic tree based on the NA gene (The length of the gene fragment was 1398 bp, ATG nt~ATA nt). The tree was generated by neighbor-joining method using MEGAX software. Phylogenetic trees were based on the comparison of nucleotide sequences of the H9N2 AIVs isolated in this study to the reference AIV sequences published in GenBank. All of those isolates were presented in black circles, in which post-2013 isolates and pre-2013 isolates were highlighted in red and green, respectively. The scale bar represents the distance unit between sequence pairs.

Journal: Transboundary and Emerging Diseases

Article Title: Diversity of the H9N2 Avian Influenza Virus in Shandong Province, China

doi: 10.1155/tbed/1432483

Figure Lengend Snippet: Phylogenetic tree based on the NA gene (The length of the gene fragment was 1398 bp, ATG nt~ATA nt). The tree was generated by neighbor-joining method using MEGAX software. Phylogenetic trees were based on the comparison of nucleotide sequences of the H9N2 AIVs isolated in this study to the reference AIV sequences published in GenBank. All of those isolates were presented in black circles, in which post-2013 isolates and pre-2013 isolates were highlighted in red and green, respectively. The scale bar represents the distance unit between sequence pairs.

Article Snippet: MEGAX software was employed to perform phylogenetic analysis for each gene segment together with the reference strain, and DNASTAR MegAlign software was used to analyze key amino acid sites.

Techniques: Generated, Software, Comparison, Isolation, Sequencing

Phylogenetic trees based on the PB1, PB2, PA, NP, M, and NS genes (The complete ORF of each gene fragment was used for evolutionary analysis). The tree was generated by neighbor-joining method using MEGAX software. Phylogenetic trees were based on the comparison of nucleotide sequences of the H9N2 AIVs isolated in this study to the reference AIV sequences published in GenBank. Isolates are highlighted in black squares. The scale bar represents the distance unit between sequence pairs.

Journal: Transboundary and Emerging Diseases

Article Title: Diversity of the H9N2 Avian Influenza Virus in Shandong Province, China

doi: 10.1155/tbed/1432483

Figure Lengend Snippet: Phylogenetic trees based on the PB1, PB2, PA, NP, M, and NS genes (The complete ORF of each gene fragment was used for evolutionary analysis). The tree was generated by neighbor-joining method using MEGAX software. Phylogenetic trees were based on the comparison of nucleotide sequences of the H9N2 AIVs isolated in this study to the reference AIV sequences published in GenBank. Isolates are highlighted in black squares. The scale bar represents the distance unit between sequence pairs.

Article Snippet: MEGAX software was employed to perform phylogenetic analysis for each gene segment together with the reference strain, and DNASTAR MegAlign software was used to analyze key amino acid sites.

Techniques: Generated, Software, Comparison, Isolation, Sequencing