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BIOTAGE
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Journal: Journal of Medical Virology
Article Title: A pyrosequencing protocol for rapid identification of SARS‐CoV‐2 variants
doi: 10.1002/jmv.27770
Figure Lengend Snippet: Schematic representation of the location of forward and reverse PCR primers (arrows) used to amplify four regions of the S gene of SARS‐CoV‐2. PCR 1 and PCR 2 target sequences corresponding to the N‐terminal domain (NTD) of the S protein and overlap by 11 bases. PCR 2 resides within the receptor‐binding domain (RBD), and PCR 4 overlies the junction between the S1 and S2 subunits (S1/S2). Common S gene mutations reported in SARS‐CoV‐2 variants, detectable by pyrosequencing the PCR products, using sequencing primers or forward PCR primers as listed in Table , are indicated in the respective boxes. Forty‐two mutations detected in specimens analyzed in the current study appear in bold type. Other rare, novel mutations may be detected within targeted sequences but are not listed.
Article Snippet: The current study describes the development of a reverse
Techniques: Binding Assay, Sequencing