retroviral pbabe puro vector (Addgene inc)
Structured Review

Retroviral Pbabe Puro Vector, supplied by Addgene inc, used in various techniques. Bioz Stars score: 96/100, based on 581 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/pbabe+vector/pBABE-puro+(Plasmid+%231764)/pmc12953752-398-1-12
Average 96 stars, based on 581 article reviews
Images
1) Product Images from "Loss of MicroRNA-29b promotes DNMT3b-mediated STING downregulation to attenuate radiotherapy-induced antitumor immunity in KRAS-mutated colorectal cancer"
Article Title: Loss of MicroRNA-29b promotes DNMT3b-mediated STING downregulation to attenuate radiotherapy-induced antitumor immunity in KRAS-mutated colorectal cancer
Journal: NPJ Precision Oncology
doi: 10.1038/s41698-026-01290-8
Figure Legend Snippet: A WiDr cells were infected with lentivirus carrying pBabe-puro-vector (Vec.) or pBabe-puro-KRAS G12D and selected for three days. WiDr-Vec. and WiDr-KRAS G12D cells were irradiated (5 Gy), and then harvested for qRT-PCR analysis after 24 hr ( n = 3). One-way ANOVA t test. * p < 0.05. B CoLo320 cells were infected with lentivirus carrying pBabe-puro-vector (Vec.) or pBabe-puro-KRAS G12D and selected for three days. CoLo320-Vec. and CoLo320-KRAS G12D cells were irradiated (5 Gy), and then harvested for qRT-PCR analysis after 24 hr ( n = 3). One-way ANOVA t test. * p < 0.05. C HCT116 cells were infected with lentivirus carrying pLKO-scramble shRNA (shNC) or pLKO-shKRAS (shKRAS) and selected for three days. HCT116 shNC and HCT116 shKRAS cells were irradiated (5 Gy), and then harvested for qRT-PCR analysis after 24 hr ( n = 3). One-way ANOVA t test. * p < 0.05 and ** p < 0.01. D SW620 shNC and SW620 shKRAS cells were irradiated (5 Gy), and then harvested for qRT-PCR analysis after 24 hr ( n = 3). One-way ANOVA t test. * p < 0.05 and ** p < 0.01. E WiDr and Colo320DM (endogenous wild-type KRAS) cells were individually infected with vector (Vec.) and KRAS G12D . Cells were selected by puromycin for three days. The level of DNMT1, DNMT3a and DNMT3b was evaluated by immunoblotting ( n = 3). One-way ANOVA t test. ** p < 0.01. F CT26, HCT116 and SW620 (endogenous mutant KRAS) cells individually infected with lentivirus carry shNC and shKRAS. Cells were selected by puromycin for three days. The level of DNMT1, DNMT3a and DNMT3b was evaluated by immunoblotting ( n = 3). One-way ANOVA t test. ** p < 0.01. G KRAS G12D -tranduced WiDr (endogenous wild-type KRAS) cells were treated with 2.5 μmol/L and 5.0 μmol/L AZA for two days. The level of STING was evaluated by immunoblotting ( n = 3). One-way ANOVA t test. * p < 0.05 and ** p < 0.01. H . KRAS G12D -tranduced CoLo320 (endogenous wild-type KRAS) cells were treated with 2.5 μmol/L and 5.0 μmol/L AZA for two days. The level of STING was evaluated by immunoblotting ( n = 3). One-way ANOVA t test. * p < 0.05 and ** p < 0.01. I HCT116 and SW620 (endogenous mutant KRAS) cells individually infected with lentivirus carry shDNMT1, shDNMT3a and shDNMT3b. Cells were selected by puromycin for three days. The mRNA level of STING was evaluated by qRT-PCR ( n = 3). One-way ANOVA t test. * p < 0.05. J The protein level of STING was evaluated by immunoblotting ( n = 3).
Techniques Used: Infection, Plasmid Preparation, Irradiation, Quantitative RT-PCR, shRNA, Western Blot, Mutagenesis
Related Articles
Mutagenesis:Article Title: Targeting pyruvate dehydrogenase kinase 1 overcomes EGFR C797S mutation-driven osimertinib resistance in non-small cell lung cancer Article Snippet: .. These mutant sequences were cloned and inserted into the Clone Assay:Article Title: Targeting pyruvate dehydrogenase kinase 1 overcomes EGFR C797S mutation-driven osimertinib resistance in non-small cell lung cancer Article Snippet: .. These mutant sequences were cloned and inserted into the Article Title: Interleukin 37 (IL-37) Reduces High Glucose-Induced Inflammation, Oxidative Stress, and Apoptosis of Podocytes by Inhibiting the STAT3–Cyclophilin A (CypA) Signaling Pathway Article Snippet: .. Full-length genes encoding STAT3 and CypA were amplified with specific primers and cloned into the Article Title: PBRM1-deficient PBAF complexes target aberrant genomic loci to activate the NF-κB pathway in clear cell renal cell carcinoma. Article Snippet: Xiaosai Yao , Jing Han Hong, Amrita M. Nargund, Michelle Shu Wen Ng, Hong Lee Heng, Zhimei Li, Peiyong Guan , Masahiro Sugiura, Pek Lim Chu, Loo Chien Wang, Xiaofen Ye, James Qu, Xiu Yi Kwek, Jeffrey Chun Tatt Lim, Wen Fong Ooi, Joanna Koh, Zhenxun Wang, You-Fu Pan, Yan Shan Ong, Kiat-Yi Tan , Jian Yuan Goh , Sheng Rong Ng , Luca Pignata, Dachuan Huang, Alexander Lezhava , Su Ting Tay, Minghui Lee, Xun Hui Yeo , Wai Leong Tam , Sun Young Rha, Shang Li , Ernesto Guccione, Andrew Futreal , Jing Tan, Joe Poh Sheng Yeong , Wanjin Hong , Robert Yauch, Kenneth Tou-En Chang , Radoslaw M. Sobota , Patrick Tan & Bin Tean Teh Plasmid Preparation:Article Title: Targeting pyruvate dehydrogenase kinase 1 overcomes EGFR C797S mutation-driven osimertinib resistance in non-small cell lung cancer Article Snippet: .. These mutant sequences were cloned and inserted into the Article Title: Protein Tyrosine Phosphatase Non-Receptor 11 ( PTPN11 /Shp2) as a Driver Oncogene and a Novel Therapeutic Target in Non-Small Cell Lung Cancer (NSCLC). Article Snippet: All cell lines used in this study were fingerprinted to authenticate the cell lines (Source BioScience, Nottingham, UK). .. A full-length PTPN11 cDNA was inserted at the EcoRI site of the Article Title: Protein Tyrosine Phosphatase Non-Receptor 11 ( PTPN11 /Shp2) as a Driver Oncogene and a Novel Therapeutic Target in Non-Small Cell Lung Cancer (NSCLC) Article Snippet: All cell lines used in this study were fingerprinted to authenticate the cell lines (Source BioScience, Nottingham, UK). .. A full-length PTPN11 cDNA was inserted at the EcoRI site of the Article Title: Interleukin 37 (IL-37) Reduces High Glucose-Induced Inflammation, Oxidative Stress, and Apoptosis of Podocytes by Inhibiting the STAT3–Cyclophilin A (CypA) Signaling Pathway Article Snippet: .. Full-length genes encoding STAT3 and CypA were amplified with specific primers and cloned into the Article Title: PBRM1-deficient PBAF complexes target aberrant genomic loci to activate the NF-κB pathway in clear cell renal cell carcinoma. Article Snippet: Xiaosai Yao , Jing Han Hong, Amrita M. Nargund, Michelle Shu Wen Ng, Hong Lee Heng, Zhimei Li, Peiyong Guan , Masahiro Sugiura, Pek Lim Chu, Loo Chien Wang, Xiaofen Ye, James Qu, Xiu Yi Kwek, Jeffrey Chun Tatt Lim, Wen Fong Ooi, Joanna Koh, Zhenxun Wang, You-Fu Pan, Yan Shan Ong, Kiat-Yi Tan , Jian Yuan Goh , Sheng Rong Ng , Luca Pignata, Dachuan Huang, Alexander Lezhava , Su Ting Tay, Minghui Lee, Xun Hui Yeo , Wai Leong Tam , Sun Young Rha, Shang Li , Ernesto Guccione, Andrew Futreal , Jing Tan, Joe Poh Sheng Yeong , Wanjin Hong , Robert Yauch, Kenneth Tou-En Chang , Radoslaw M. Sobota , Patrick Tan & Bin Tean Teh Article Title: Ligand-specific regulation of a binary enhancer code dictating cellular senescence Article Snippet: Lipofectamine 2000 (Thermo Fisher 12566014) was used for all transfections, following the manufacturer’s protocol, with the ratios of plasmids and Lipofectamine 2000 reagent listed below. .. Retrovirus for OIS experiments was produced by combining a 7.5 : 7.5 ug ratio of pHCMVAmphoEnv (Addgene 15799) packaging plasmid and Sequencing:Article Title: Targeting pyruvate dehydrogenase kinase 1 overcomes EGFR C797S mutation-driven osimertinib resistance in non-small cell lung cancer Article Snippet: .. These mutant sequences were cloned and inserted into the Amplification:Article Title: Interleukin 37 (IL-37) Reduces High Glucose-Induced Inflammation, Oxidative Stress, and Apoptosis of Podocytes by Inhibiting the STAT3–Cyclophilin A (CypA) Signaling Pathway Article Snippet: .. Full-length genes encoding STAT3 and CypA were amplified with specific primers and cloned into the other:Article Title: In Vivo Tracking of Chemokine Receptor CXCR4-Engineered Mesenchymal Stem Cell Migration by Optical Molecular Imaging Article Snippet: The pBABE vector was purchased from Addgene (Cambridge, MA, USA). Article Title: ERβ1 represses basal-like breast cancer epithelial to mesenchymal transition by destabilizing EGFR Article Snippet: siRNA targeting luciferase was used as a control (Cat. No. 12935-146, Invitrogen). Reverse Transcription:Article Title: PBRM1-deficient PBAF complexes target aberrant genomic loci to activate the NF-κB pathway in clear cell renal cell carcinoma. Article Snippet: Xiaosai Yao , Jing Han Hong, Amrita M. Nargund, Michelle Shu Wen Ng, Hong Lee Heng, Zhimei Li, Peiyong Guan , Masahiro Sugiura, Pek Lim Chu, Loo Chien Wang, Xiaofen Ye, James Qu, Xiu Yi Kwek, Jeffrey Chun Tatt Lim, Wen Fong Ooi, Joanna Koh, Zhenxun Wang, You-Fu Pan, Yan Shan Ong, Kiat-Yi Tan , Jian Yuan Goh , Sheng Rong Ng , Luca Pignata, Dachuan Huang, Alexander Lezhava , Su Ting Tay, Minghui Lee, Xun Hui Yeo , Wai Leong Tam , Sun Young Rha, Shang Li , Ernesto Guccione, Andrew Futreal , Jing Tan, Joe Poh Sheng Yeong , Wanjin Hong , Robert Yauch, Kenneth Tou-En Chang , Radoslaw M. Sobota , Patrick Tan & Bin Tean Teh Produced:Article Title: Ligand-specific regulation of a binary enhancer code dictating cellular senescence Article Snippet: Lipofectamine 2000 (Thermo Fisher 12566014) was used for all transfections, following the manufacturer’s protocol, with the ratios of plasmids and Lipofectamine 2000 reagent listed below. .. Retrovirus for OIS experiments was produced by combining a 7.5 : 7.5 ug ratio of pHCMVAmphoEnv (Addgene 15799) packaging plasmid and |