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Journal: Neurogenetics
Article Title: A perspective on epigenomic aging processes in the human brain and their plasticity in patients with mental disorders – a systematic review
doi: 10.1007/s10048-024-00771-x
Figure Lengend Snippet: The molecular aging process in cells affects the genome integrity and the DNAm signature. The ends of chromosomes are organized as telomeric complexes. Telomeres comprise of [TTAGGG] n tandem repeats of double-stranded DNA and protruding single-stranded 3’-overhangs. Due to the absence of telomerase activity in healthy somatic cells gradual telomere shortening with each cell cycle is an age-dependent process, which limits the maximum number of cell divisions, thus providing a protective anti-proliferative mechanism. Telomere length is correlated with biological aging. However, their length of origin at the beginning of ontogeny seems to be heterogeneous between sexes and ethnicities , which complicates calibration when longitudinal measurements are not available. Whereas genome-wide studies on DNAm signatures in monozygotic twins suggest a high level of persistence of early genome programming , subtle changes in numerous genetic loci are observed at the same time, which correlate with biological age. These form the basis for the concept of so-called epigenetic clocks [ – ]. Such age-related DNAm variations can take place in intergenic regions (yellow shaded) as well as in the vicinty of gene promoters (red shaded), where they can take influence on gene regulation. The frequently used ‘Horvath clock’ is, in combination with Illumina’s Infinium HumanMethylome450 BeadChips, calibrated for 353 CpG sites, which can be associated with genes, promoters, long-range regulatory elements or intergenic DNA with no known function [ , ]. The illustration exemplarily shows an age-related hypermethylated intergenic region as well as a hypomethylated gene promoter during fetal growth that cis-activates mRNA synthesis from adjacent transcription start site (TSS). Below are shown the results of senescence, whereafter the same intergenic region became hypomethlylated and the promoter became hypermethylated. Promoter hypermethylation resulted in the suppression of mRNA synthesis from the adjacent TSS
Article Snippet: Eleven of the studies used Horvath’s model in combination with different versions of
Techniques: Activity Assay, Genome Wide
Journal: Neurogenetics
Article Title: A perspective on epigenomic aging processes in the human brain and their plasticity in patients with mental disorders – a systematic review
doi: 10.1007/s10048-024-00771-x
Figure Lengend Snippet: Summary of epigenetic age studies in various brain regions and mental disorders
Article Snippet: Eleven of the studies used Horvath’s model in combination with different versions of
Techniques: Control, Expressing, DNA Methylation Assay, Gene Expression