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de bruijn graph assemblers  (Illumina Inc)
90
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Data set 1 was of constant 30-fold coverage. Data set 2 and 3 were of varying coverage. Data set 1 and 2 were generated with the default read length distribution of ART whereas data set 3 was generated with a customized longer read length distribution. If there are repeated k-mers in sequence or all the k-mers are isolated in the <t>de</t> <t>Bruijn</t> graph, then this read is defined as “useless” here.
De Bruijn Graph Assemblers, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/de+bruijn+graph+assembler/de+bruijn+graph+based+assemblers/pmc03517413-197-13-12
Average 90 stars, based on 1 article reviews
de bruijn graph assemblers - by Bioz Stars, 2026-10
90/100 stars
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de bruijn assembly graph from the illumina data  (Illumina Inc)
90
Illumina Inc de bruijn assembly graph from the illumina data
Data set 1 was of constant 30-fold coverage. Data set 2 and 3 were of varying coverage. Data set 1 and 2 were generated with the default read length distribution of ART whereas data set 3 was generated with a customized longer read length distribution. If there are repeated k-mers in sequence or all the k-mers are isolated in the <t>de</t> <t>Bruijn</t> graph, then this read is defined as “useless” here.
De Bruijn Assembly Graph From The Illumina Data, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/de+bruijn+graph+assembler/de+bruijn+graph+type+illumina+only+assembly/pm35353677-76-10-10
Average 90 stars, based on 1 article reviews
de bruijn assembly graph from the illumina data - by Bioz Stars, 2026-10
90/100 stars
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de bruijn graph-based de novo assembler  (CLC Bio)
90
CLC Bio de bruijn graph-based de novo assembler
Data set 1 was of constant 30-fold coverage. Data set 2 and 3 were of varying coverage. Data set 1 and 2 were generated with the default read length distribution of ART whereas data set 3 was generated with a customized longer read length distribution. If there are repeated k-mers in sequence or all the k-mers are isolated in the <t>de</t> <t>Bruijn</t> graph, then this read is defined as “useless” here.
De Bruijn Graph Based De Novo Assembler, supplied by CLC Bio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/de+bruijn+graph+assembler/de+bruijn+graph+based+de+novo+assembler/pmc08527508-98-10-21
Average 90 stars, based on 1 article reviews
de bruijn graph-based de novo assembler - by Bioz Stars, 2026-10
90/100 stars
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de bruijn assembly graph  (Illumina Inc)
90
Illumina Inc de bruijn assembly graph
Data set 1 was of constant 30-fold coverage. Data set 2 and 3 were of varying coverage. Data set 1 and 2 were generated with the default read length distribution of ART whereas data set 3 was generated with a customized longer read length distribution. If there are repeated k-mers in sequence or all the k-mers are isolated in the <t>de</t> <t>Bruijn</t> graph, then this read is defined as “useless” here.
De Bruijn Assembly Graph, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/de+bruijn+graph+assembler/de+bruijn+graph+based+assemblers/pmc07490894-104-3-11
Average 90 stars, based on 1 article reviews
de bruijn assembly graph - by Bioz Stars, 2026-10
90/100 stars
  Buy from Supplier
de-bruijn graph-based trinity assembler  (Illumina Inc)
90
Illumina Inc de-bruijn graph-based trinity assembler
Data set 1 was of constant 30-fold coverage. Data set 2 and 3 were of varying coverage. Data set 1 and 2 were generated with the default read length distribution of ART whereas data set 3 was generated with a customized longer read length distribution. If there are repeated k-mers in sequence or all the k-mers are isolated in the <t>de</t> <t>Bruijn</t> graph, then this read is defined as “useless” here.
De Bruijn Graph Based Trinity Assembler, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/de+bruijn+graph+assembler/de+bruijn+graph+based+assemblers/pm31583573-60-16-24
Average 90 stars, based on 1 article reviews
de-bruijn graph-based trinity assembler - by Bioz Stars, 2026-10
90/100 stars
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abyss 1.3.0 de bruijn graph assembler  (Illumina Inc)
90
Illumina Inc abyss 1.3.0 de bruijn graph assembler
Data set 1 was of constant 30-fold coverage. Data set 2 and 3 were of varying coverage. Data set 1 and 2 were generated with the default read length distribution of ART whereas data set 3 was generated with a customized longer read length distribution. If there are repeated k-mers in sequence or all the k-mers are isolated in the <t>de</t> <t>Bruijn</t> graph, then this read is defined as “useless” here.
Abyss 1.3.0 De Bruijn Graph Assembler, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/de+bruijn+graph+assembler/abyss+1+3+0+de+bruijn+graph+assembler/pmc06978878-123-12-5
Average 90 stars, based on 1 article reviews
abyss 1.3.0 de bruijn graph assembler - by Bioz Stars, 2026-10
90/100 stars
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de-bruijn graph based assembler soapdenovo2  (Illumina Inc)
90
Illumina Inc de-bruijn graph based assembler soapdenovo2
Data set 1 was of constant 30-fold coverage. Data set 2 and 3 were of varying coverage. Data set 1 and 2 were generated with the default read length distribution of ART whereas data set 3 was generated with a customized longer read length distribution. If there are repeated k-mers in sequence or all the k-mers are isolated in the <t>de</t> <t>Bruijn</t> graph, then this read is defined as “useless” here.
De Bruijn Graph Based Assembler Soapdenovo2, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/de+bruijn+graph+assembler/soapdenovo2/pmc06901071__giz138_giga___d___19___00257_revision_1-383-11-1
Average 90 stars, based on 1 article reviews
de-bruijn graph based assembler soapdenovo2 - by Bioz Stars, 2026-10
90/100 stars
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de bruijn graph–based assembler soapdenovo2 version 2.04  (Illumina Inc)
90
Illumina Inc de bruijn graph–based assembler soapdenovo2 version 2.04
Data set 1 was of constant 30-fold coverage. Data set 2 and 3 were of varying coverage. Data set 1 and 2 were generated with the default read length distribution of ART whereas data set 3 was generated with a customized longer read length distribution. If there are repeated k-mers in sequence or all the k-mers are isolated in the <t>de</t> <t>Bruijn</t> graph, then this read is defined as “useless” here.
De Bruijn Graph–Based Assembler Soapdenovo2 Version 2.04, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/de+bruijn+graph+assembler/soapdenovo2/pmc06901071-206-11-1
Average 90 stars, based on 1 article reviews
de bruijn graph–based assembler soapdenovo2 version 2.04 - by Bioz Stars, 2026-10
90/100 stars
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Data set 1 was of constant 30-fold coverage. Data set 2 and 3 were of varying coverage. Data set 1 and 2 were generated with the default read length distribution of ART whereas data set 3 was generated with a customized longer read length distribution. If there are repeated k-mers in sequence or all the k-mers are isolated in the de Bruijn graph, then this read is defined as “useless” here.

Journal: PLoS ONE

Article Title: Evaluating de Bruijn Graph Assemblers on 454 Transcriptomic Data

doi: 10.1371/journal.pone.0051188

Figure Lengend Snippet: Data set 1 was of constant 30-fold coverage. Data set 2 and 3 were of varying coverage. Data set 1 and 2 were generated with the default read length distribution of ART whereas data set 3 was generated with a customized longer read length distribution. If there are repeated k-mers in sequence or all the k-mers are isolated in the de Bruijn graph, then this read is defined as “useless” here.

Article Snippet: In this study, we conducted such an evaluation and found that those Illumina/Solexa-specialized de Bruijn graph assemblers performed well on 454 transcriptomic data.

Techniques: Generated, Sequencing, Isolation