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Antimicrobial resistance phenotype and characterisation by whole genome sequencing (WGS) of 29 E coli isolates from 84 cross-sectional study participants, ordered by MLST sequence type

Journal: Veterinary Record Open

Article Title: Prevalence of faecal carriage of extended-spectrum β-lactamase (ESBL)-producing Escherichia coli in veterinary hospital staff and students

doi: 10.1136/vetreco-2018-000307

Figure Lengend Snippet: Antimicrobial resistance phenotype and characterisation by whole genome sequencing (WGS) of 29 E coli isolates from 84 cross-sectional study participants, ordered by MLST sequence type

Article Snippet: , 1241 , AmpNal , N , Y (Y) , bla CTX-M Grp 9 , 38 (CC-38) , O86:H18 , Col(MG828)*, IncB/O/K/Z, IncF RST F51:A-:B10, IncI1 Incomplete ST , bla CTX-M-14 , dfrA7 , air, capU, eilA, gad, iha, iss, nfaE, sat, senB.

Techniques: Sequencing

E coli isolates with bla CTX-M , bla TEM , bla SHV , bla OXA or bla AmpC genes as determined by PCR assay <xref ref-type= 25–30 and/or characterised by whole-genome sequencing (WGS) from 16 (n=27) longitudinal study participants over a six-week study period" width="100%" height="100%">

Journal: Veterinary Record Open

Article Title: Prevalence of faecal carriage of extended-spectrum β-lactamase (ESBL)-producing Escherichia coli in veterinary hospital staff and students

doi: 10.1136/vetreco-2018-000307

Figure Lengend Snippet: E coli isolates with bla CTX-M , bla TEM , bla SHV , bla OXA or bla AmpC genes as determined by PCR assay 25–30 and/or characterised by whole-genome sequencing (WGS) from 16 (n=27) longitudinal study participants over a six-week study period

Article Snippet: , 1241 , AmpNal , N , Y (Y) , bla CTX-M Grp 9 , 38 (CC-38) , O86:H18 , Col(MG828)*, IncB/O/K/Z, IncF RST F51:A-:B10, IncI1 Incomplete ST , bla CTX-M-14 , dfrA7 , air, capU, eilA, gad, iha, iss, nfaE, sat, senB.

Techniques: Transmission Electron Microscopy, Sequencing