biomarker pattern software (bps (Ciphergen inc)
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Biomarker Pattern Software (Bps, supplied by Ciphergen inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/biomarker+pattern+software+(bps/biomarker+pattern+software/pmc04737680-131-5-9
Average 90 stars, based on 1 article reviews
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1) Product Images from "A Group of Novel Serum Diagnostic Biomarkers for Multidrug-Resistant Tuberculosis by iTRAQ-2D LC-MS/MS and Solexa Sequencing"
Article Title: A Group of Novel Serum Diagnostic Biomarkers for Multidrug-Resistant Tuberculosis by iTRAQ-2D LC-MS/MS and Solexa Sequencing
Journal: International Journal of Biological Sciences
doi: 10.7150/ijbs.13805
Figure Legend Snippet: Data mining of the set of multidrug-resistant tuberculosis serum proteins biomarker candidates. (A) Biological process; (B) Cellular component; (C) Molecular function; (D) KEGG pathway mapping; (E) The network of proteins analyzed by String software.
Techniques Used: Biomarker Assay, Software
Figure Legend Snippet: Data mining of the set of multidrug-resistant tuberculosis serum miRNAs biomarker candidates. MDR-TB: multidrug-resistant tuberculosis; DS-TB: drug-sensitive tuberculosis. (A) GO analysis; (B) KEGG analysis; (C) cluster analysis.
Techniques Used: Biomarker Assay
Figure Legend Snippet: Decision trees in the diagnostic model for the multidrug-resistant tuberculosis by the Biomarker Patterns Software. The diagnostic model shows the tree structure and sample distribution of the set. MDR-TB: multidrug-resistant tuberculosis; DS-TB: drug-sensitive tuberculosis. (A) diagnostic model for MDR-TB patients and healthy controls; (B) diagnostic model for MDR-TB patients and DS-TB patients.
Techniques Used: Diagnostic Assay, Biomarker Assay, Software
Related Articles
other:Article Title: Screening and identification of potential protein biomarkers for evaluating the efficacy of intensive therapy in pulmonary tuberculosis. Article Snippet: This research aimed to discover potential biomarkers for evaluating the therapeutic efficacy of intensive therapy in pulmonary tuberculosis (TB).. Protein profiles in 2-months intensively treated TB patients, untreated TB patients, and healthy controls were investigated with iTRAQ-2DLC-MS/MS technique.. 71 differential proteins were identified in 2-months intensively treated TB patients. Article Title: SELDI-TOF-MS Proteomic Profiling of Serum, Urine, and Amniotic Fluid in Neural Tube Defects Article Snippet: Parameters of protein peaks were presented as mean value plus or minus standard deviation and spectral data of the training set were further analyzed using Biomarker Pattern Software (BPS) (version 5.0; Ciphergen Biosystems) to establish a classification tree. Article Title: Diagnosis of sepsis and systemic inflammatory response syndrome Article Snippet: CART analysis was performed using Ciphergen Biomarker Pattern software (BPS) version 5.0. Biomarker Discovery:Article Title: Urinary RKIP/p-RKIP is a potential diagnostic and prognostic marker of clear cell renal cell carcinoma Article Snippet: .. The intensities (μA) of all the mass peaks were transferred to Article Title: Urinary diagnostic proteomic markers for dynapenia in cancer patients Article Snippet: .. Model building and validation Clustered peak lists were analysed with the Article Title: Proteomic identification of potential markers of myosteatosis in human urine Article Snippet: .. Clustered peak lists were analysed with the Article Title: Proteomic identification of potential markers of myosteatosis in human urine Article Snippet: .. Model building and validation Clustered peak lists were analysed with the Article Title: A Group of Novel Serum Diagnostic Biomarkers for Multidrug-Resistant Tuberculosis by iTRAQ-2D LC-MS/MS and Solexa Sequencing Article Snippet: Receiver operating characteristic (ROC) curve were calculated by MedCalc Software (Belgium, Version 12.4.2.0) and the diagnostic score of MDR-TB patients was set as 1, whereas that of DS-TB patients and healthy controls was set as 0. .. Selected biomarkers were transferred to Software:Article Title: Urinary RKIP/p-RKIP is a potential diagnostic and prognostic marker of clear cell renal cell carcinoma Article Snippet: .. The intensities (μA) of all the mass peaks were transferred to Article Title: Urinary diagnostic proteomic markers for dynapenia in cancer patients Article Snippet: .. Model building and validation Clustered peak lists were analysed with the Article Title: Proteomic identification of potential markers of myosteatosis in human urine Article Snippet: .. Clustered peak lists were analysed with the Article Title: Proteomic identification of potential markers of myosteatosis in human urine Article Snippet: .. Model building and validation Clustered peak lists were analysed with the Article Title: A Group of Novel Serum Diagnostic Biomarkers for Multidrug-Resistant Tuberculosis by iTRAQ-2D LC-MS/MS and Solexa Sequencing Article Snippet: Receiver operating characteristic (ROC) curve were calculated by MedCalc Software (Belgium, Version 12.4.2.0) and the diagnostic score of MDR-TB patients was set as 1, whereas that of DS-TB patients and healthy controls was set as 0. .. Selected biomarkers were transferred to Construct:Article Title: A Group of Novel Serum Diagnostic Biomarkers for Multidrug-Resistant Tuberculosis by iTRAQ-2D LC-MS/MS and Solexa Sequencing Article Snippet: Receiver operating characteristic (ROC) curve were calculated by MedCalc Software (Belgium, Version 12.4.2.0) and the diagnostic score of MDR-TB patients was set as 1, whereas that of DS-TB patients and healthy controls was set as 0. .. Selected biomarkers were transferred to |
