Recombinant:Article Title: FAM134B Controls Collagen I Dynamics in Hepatic Stellate Cell-Driven Fibrosis
Article Snippet: .. Antibodies used are as follows: Actin at 1:3000 (Santa Cruz sc-376421), ATF6 at 1:1000 (Cell Signaling Technologies D4Z8V, RRID:AB_2799696), ATF6α at 1:1000 (Abcam 227830), CALCOCO2 at 1:1000 (Proteintech 12229-I-AP, RRID:AB_11182600), CCPG1 at 1:1000 (Cell Signaling Technologies E3C5G, RRID:AB_2935809), Collagen I at 1:1000 (Southern Biotech 1310–01), FAM134B at 1:1000 (Cell Signaling Technologies E8Y9R, RRID:AB_3696016), Fibronectin at 1:1000 (Abcam ab18265, RRID:AB_444365), GAPDH at 1:3000 (Thermo Fisher AM4300, RRID:AB_2536381), HSC70 at 1:3000 (Santa Cruz sc-7298), LC3A/B at 1:1000 (Cell Signaling Technologies D3U4C, RRID:AB_2617131), and sXBP1 at 1:1000 (Cell Signaling Technologies D2C1F, RRID:AB_2687943), p-PERK 1:1000 (Custom made, #LLY-71) ( 64 ), total PERK (CST, #C33E10), P-eIF2α (S51) 1:1000 (Abcam,#32157), total eIF2α 1:1000 (Cell Signaling, #5342), ATF4 antibody was prepared against the corresponding recombinant human proteins, which were affinity purified ( 65 ). .. For conditioned media analysis, conditioned media was collected from cells, concentrated with Amicon Ultra Centrifugal Filters (Millipore UFC5030BK), mixed with 4x Lameli sample buffer with β-ME, and heated for 15 minutes.
Article Title: Nuclear PD-L1 regulates YAP-driven transcription via the PGE 2 -EP4-YAP-importin α3 axis in solid tumors.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies PD-L1 (E1L3N) Cell Signaling Technology Cat13684; RRID:AB_2799389 YAP (D8H1X) Cell Signaling Technology Cat#14074; RRID:AB_2798692 YAP (63.7) Santa Cruz Biotechnology Cat#sc-101199; RRID: AB_1131430 Phospho-YAP (Ser127) (D9W2I) Cell Signaling Technology Cat#13008; RRID:AB_2650553 Pan-TEAD Cell Signaling Technology Cat#13295; RRID:AB_2687902 TEAD4 antibody (5H3) AbCam Cat#ab58310; RRID: AB_945789 TAZ Cell Signaling Technology Cat#83669; RRID:AB_2800026 Karyopherin α4 AbCam Cat#ab6039; RRID:AB_305248 Karyopherin β1 (3E9) AbCam Cat#ab2811; RRID:AB_2133989 COX-2 AbCam Cat#ab15191; RRID:AB_2085144 EP4 (C-4) Santa Cruz Biotechnology Cat#sc-55596; RRID:AB_2174775 Histone 3 (1G1) Santa Cruz Biotechnology Cat#sc-517576; RRID:AB_2848194 Alpha tubulin (DM1A) Santa Cruz Biotechnology Cat#sc-32293; RRID:AB_628412 Vinculin (7F9) Santa Cruz Biotechnology Cat#sc-73614; RRID:AB_1131294 Lamin B1 (B-10) Santa Cruz Biotechnology Cat#sc-374015; RRID:AB_1237141 BrdU (IIB5) Santa Cruz Biotechnology Cat#sc-32323; RRID:AB_626766 Goat anti-Rabbit IgG (H + L), Alexa Fluor 488 Thermo Fisher Scientific Cat#A-11008; RRID:AB_143165 Goat anti-mouse IgG (H + L), Alexa Fluor 594 Thermo Fisher Scientific Cat#A-11032; RRID:AB_2534091 Goat Anti-Rabbit Immunoglobulins/HRP Dako Cat#P0448; RRID:AB_2617138 Goat Anti-Mouse Immunoglobulins/HRP Dako Cat#P0447; RRID:AB_2617137 Rabbit TrueBlot ULTRA: Anti-Rabbit IgG HRP Rockland Immunochemicals Cat#18-8816-33; RRID:AB_469529 Mouse TrueBlot ULTRA: Anti-Mouse Ig HRP Rockland Immunochemicals Cat#18-8817-33; RRID:AB_10126892 Chemicals, peptides, and recombinant proteins 16, 16-dimethyl Prostaglandin E2 (dmPGE2) Cayman Chemical Cat#14750 AH6809 Cayman Chemical Cat#14050 ONO-AE3-208 Cayman Chemical Cat#14522 Celecoxib Selleck Chemicals Cat#S1261 Verteporfin Selleck Chemicals Cat#S1786 Tween 20 Sigma Cat#P1379-25ML Triton X-100 Sigma Cat#×100-500ML Crystal Violet Sigma Cat#C0775-25G DAPI Sigma Cat#D9542-5MG Fetal Bovine Serum HyClone Cat#SV30160 RPMI 1640 HyClone Cat#SH30027 MEM HyClone Cat#SH30024 DMEM HyClone Cat#SH30243 Penicillin-Streptomycin (10,000 U/mL) HyClone Cat#SV30010 Non-Essential Amino Acids HyClone Cat#SH30238.01 GlutaMax Thermo Fisher Scientific Cat#35050061 Trypsin-EDTA (0.25%) Thermo Fisher Scientific Cat#25200056 (Continued on next page) Cell Reports 45, 116963, February 24, 2026 11 .. REAGENT or RESOURCE SOURCE IDENTIFIER Opti-MEM Thermo Fisher Scientific Cat# 31985070 Paraformaldehyde Solution, 4% in PBS Thermo Fisher Scientific Cat#J19943.K2 Lipofectamine 3000 Transfection Reagent Thermo Fisher Scientific Cat#L3000015 Lipofectamine RNAiMAX Transfection Reagent Thermo Fisher Scientific Cat#13778150 HALT protease/phosphatase inhibitor cocktail Thermo Fisher Scientific Cat#78440 RIPA Lysis buffer Thermo Fisher Scientific Cat#89900 IP Lysis Buffer Thermo Fisher Scientific Cat#87787 Phosphate Buffered Saline (PBS), pH 7.4 Thermo Fisher Scientific Cat#10010023 Tris-buffered Saline (TBS), pH 7.4 Thermo Fisher Scientific Cat#J62938.K7 BrdU (5-Bromo-2′-Deoxyuridine) Thermo Fisher Scientific Cat#B23151 Control siRNA Dharmacon Cat#D-001810-10-20 CD274 siRNA Dharmacon Cat#L-015836-01-0010 KPNA4 siRNA Dharmacon Cat#L-017477-00-0010 KPNB1 siRNA Dharmacon Cat#L-017523-00-0010 WWTR1 siRNA Dharmacon Cat#L-016083-00-0010 Control shRNA Santa Cruz Biotechnology Cat#sc-108060 YAP1 shRNA Santa Cruz Biotechnology Cat#sc-38637-SH Protein A/G PLUS-Agarose Santa Cruz Biotechnology Cat#sc-2003 TrueBlot Anti-Rabbit Ig IP Agarose Beads Rockland Immunochemicals Cat#00-8800-25 TrueBlot Anti-Mouse Ig IP Agarose Beads Rockland Immunochemicals Cat#00-8811-25 CMV-Renilla Addgene Cat#118066 8xGTIIC Addgene Cat#34615 Critical commercial assays Duolink In Situ Detection Reagents Orange Sigma Cat#DUO92007 Duolink In Situ PLA® Probe Anti-Rabbit PLUS Sigma Cat#DUO92002 Duolink In Situ PLA® Probe Anti-Mouse MINUS Sigma Cat#DUO92004 Pierce Bradford Protein Assay Kit Thermo Fisher Scientific Cat#23200 NE-PER Nuclear and Cytoplasmic Extraction Reagents Thermo Fisher Scientific Cat#78835 RevertAid H Minus First Strand cDNA Synthesis Kit Thermo Fisher Scientific Cat#K1632 Maxima Probe/ROX qPCR Master Mix (2×) Thermo Fisher Scientific Cat#0232 SYBR Green Universal Master Mix Thermo Fisher Scientific Cat#4309155 WST-1 Assay Reagent AbCam Cat#ab155902 Dual-luciferase Reporter Assay System Promega Cat#E1910 Nuclear Extract Kit Active Motif Cat#40410 Nuclear Complex Co-IP Kit Active Motif Cat#54001 ChIP-IT Express Enzymatic kit Active Motif Cat#53009 Immobilon ECL Ultra Western HRP Substrate Millipore Cat#WBULS0500 MycoAlert® Mycoplasma Detection Kit Lonza Cat#LT07-418 Experimental models: Cell lines RKO ATCC Cat#CRL-2577; RRID:CVCL_0504 SW480 ATCC Cat#CCL-228; RRID:CVCL_0546 MDA-MB-231 ATCC Cat#HTB-26; RRID:CVCL_0062 (Continued on next page) 12 Cell Reports 45, 116963, February 24, 2026
Article Title: Glycogen and lactate metabolism in mouse fetal Sertoli cells sustain the germ line.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Glycogen Otto Baba 27 IV58B6 AMH Santa Cruz Cat#sc-6886; RRID: AB_649207 FOXL2 Abcam Cat# ab5096; RRID: AB_304750 FOXL2 Dagmar Williams RRID: AB_2687958 NR5A1 Cosmo Bio Cat# KO610; RRID: AB_3696859 PPP1R3C Proteintech Cat# 29424-1-AP; RRID: AB_2918304 PYGB Proteintech Cat# 12075-1-AP; RRID: AB_2174885 SOX9 Milipore Cat# AB5535; RRID: AB_2239761 SOX9 R&D systems Cat# AF3075; RRID: AB_2194160 SRY Dagmar Williams RRID: AB_2687957 Ki-67 BD Cat# 550609; RRID: AB_393778 CC3 Cell Signaling Cat# 9661; RRID: AB_2341188 DDX4 Abcam Cat# ab13840; RRID: AB_443012 TRA98 Abcam Cat# ab82527; RRID: AB_1659152 MCT1 Milipore Cat# AB1286; RRID: AB_11212410 MCT4 Santa Cruz Cat# sc-376140; RRID: AB_10992036 HuC/D Vanda Lennon RRID: AB_2813895 Alexa Fluor 488-Anti-Mouse Invitrogen Cat# A21202; RRID: AB_141607 Alexa Fluor 488-Anti-Rabbit Invitrogen Cat# A21206; RRID: AB_2535792 Alexa Fluor 488-Anti-Rat Invitrogen Cat# A21208; RRID: AB_2535794 Alexa Fluor 488-Anti-Goat Invitrogen Cat# A11055; RRID: AB_2534102 Alexa Fluor 568-Anti-Mouse Invitrogen Cat# A10037; RRID: AB_11180865 Alexa Fluor 568-Anti-Rabbit Invitrogen Cat# A10042; RRID: AB_2534017 Alexa Fluor 568-Anti-Rat Invitrogen Cat# A78946; RRID: AB_2910653 Alexa Fluor 568-Anti-Goat Invitrogen Cat# A11057; RRID: AB_142581 Alexa Fluor 647-Anti-Mouse Invitrogen Cat# A31571; RRID: AB_162542 Alexa Fluor 647-Anti-Rabbit Invitrogen Cat# A31573; RRID: AB_2536183 DyLight650-Anti-Rat Invitrogen Cat# SA510029; RRID: AB_2556609 Alexa Fluor 647-Anti-Goat Invitrogen Cat# A21447; RRID: AB_2535864 Cy5-Anti-Chicken Jackson Cat# 703-175-155; RRID: AB_2340365 Chemicals, peptides, and recombinant proteins CP 316819 (GPI) Sigma-Aldrich Cat# PZ0189 Syrosingopine medchemexpress Cat# HY-N4115 Sodium L-Lactate Sigma-Aldrich Cat# L7022 D-glucose Macron Chemicals Cat# 4912-12 Critical commercial assays Arcturus TM PicoPure TM RNA Isolation Kit Applied Biosystems Cat# KIT0204 RNase-Free DNase Set Qiagen Cat# 79254 Qubit TM RNA High Sensitivity kit ThermoFisher Scientific Cat# Q32852 Tecan’s Ovation® RNA-Seq System V2 Tecan Cat# 7102 Tecan’s Celero TM EZ DNA-Seq Tecan Cat# 30188860 TruSeq Stranded mRNA Library Prep Illumina Cat# 20020594 Lactate-Glo Assay Promega Cat# J5021 Qubit Protein Assay ThermoFisher Scientific Cat# Q33211 (Continued on next page) Cell Reports 45, 117069, March 24, 2026 11 .. C57BL/6J mice were purchased from Jackson Laboratory (stock number 000664).
Affinity Purification:Article Title: FAM134B Controls Collagen I Dynamics in Hepatic Stellate Cell-Driven Fibrosis
Article Snippet: .. Antibodies used are as follows: Actin at 1:3000 (Santa Cruz sc-376421), ATF6 at 1:1000 (Cell Signaling Technologies D4Z8V, RRID:AB_2799696), ATF6α at 1:1000 (Abcam 227830), CALCOCO2 at 1:1000 (Proteintech 12229-I-AP, RRID:AB_11182600), CCPG1 at 1:1000 (Cell Signaling Technologies E3C5G, RRID:AB_2935809), Collagen I at 1:1000 (Southern Biotech 1310–01), FAM134B at 1:1000 (Cell Signaling Technologies E8Y9R, RRID:AB_3696016), Fibronectin at 1:1000 (Abcam ab18265, RRID:AB_444365), GAPDH at 1:3000 (Thermo Fisher AM4300, RRID:AB_2536381), HSC70 at 1:3000 (Santa Cruz sc-7298), LC3A/B at 1:1000 (Cell Signaling Technologies D3U4C, RRID:AB_2617131), and sXBP1 at 1:1000 (Cell Signaling Technologies D2C1F, RRID:AB_2687943), p-PERK 1:1000 (Custom made, #LLY-71) ( 64 ), total PERK (CST, #C33E10), P-eIF2α (S51) 1:1000 (Abcam,#32157), total eIF2α 1:1000 (Cell Signaling, #5342), ATF4 antibody was prepared against the corresponding recombinant human proteins, which were affinity purified ( 65 ). .. For conditioned media analysis, conditioned media was collected from cells, concentrated with Amicon Ultra Centrifugal Filters (Millipore UFC5030BK), mixed with 4x Lameli sample buffer with β-ME, and heated for 15 minutes.
Cell-Signaling:
Isolation:Article Title: Glycogen and lactate metabolism in mouse fetal Sertoli cells sustain the germ line.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Glycogen Otto Baba 27 IV58B6 AMH Santa Cruz Cat#sc-6886; RRID: AB_649207 FOXL2 Abcam Cat# ab5096; RRID: AB_304750 FOXL2 Dagmar Williams RRID: AB_2687958 NR5A1 Cosmo Bio Cat# KO610; RRID: AB_3696859 PPP1R3C Proteintech Cat# 29424-1-AP; RRID: AB_2918304 PYGB Proteintech Cat# 12075-1-AP; RRID: AB_2174885 SOX9 Milipore Cat# AB5535; RRID: AB_2239761 SOX9 R&D systems Cat# AF3075; RRID: AB_2194160 SRY Dagmar Williams RRID: AB_2687957 Ki-67 BD Cat# 550609; RRID: AB_393778 CC3 Cell Signaling Cat# 9661; RRID: AB_2341188 DDX4 Abcam Cat# ab13840; RRID: AB_443012 TRA98 Abcam Cat# ab82527; RRID: AB_1659152 MCT1 Milipore Cat# AB1286; RRID: AB_11212410 MCT4 Santa Cruz Cat# sc-376140; RRID: AB_10992036 HuC/D Vanda Lennon RRID: AB_2813895 Alexa Fluor 488-Anti-Mouse Invitrogen Cat# A21202; RRID: AB_141607 Alexa Fluor 488-Anti-Rabbit Invitrogen Cat# A21206; RRID: AB_2535792 Alexa Fluor 488-Anti-Rat Invitrogen Cat# A21208; RRID: AB_2535794 Alexa Fluor 488-Anti-Goat Invitrogen Cat# A11055; RRID: AB_2534102 Alexa Fluor 568-Anti-Mouse Invitrogen Cat# A10037; RRID: AB_11180865 Alexa Fluor 568-Anti-Rabbit Invitrogen Cat# A10042; RRID: AB_2534017 Alexa Fluor 568-Anti-Rat Invitrogen Cat# A78946; RRID: AB_2910653 Alexa Fluor 568-Anti-Goat Invitrogen Cat# A11057; RRID: AB_142581 Alexa Fluor 647-Anti-Mouse Invitrogen Cat# A31571; RRID: AB_162542 Alexa Fluor 647-Anti-Rabbit Invitrogen Cat# A31573; RRID: AB_2536183 DyLight650-Anti-Rat Invitrogen Cat# SA510029; RRID: AB_2556609 Alexa Fluor 647-Anti-Goat Invitrogen Cat# A21447; RRID: AB_2535864 Cy5-Anti-Chicken Jackson Cat# 703-175-155; RRID: AB_2340365 Chemicals, peptides, and recombinant proteins CP 316819 (GPI) Sigma-Aldrich Cat# PZ0189 Syrosingopine medchemexpress Cat# HY-N4115 Sodium L-Lactate Sigma-Aldrich Cat# L7022 D-glucose Macron Chemicals Cat# 4912-12 Critical commercial assays Arcturus TM PicoPure TM RNA Isolation Kit Applied Biosystems Cat# KIT0204 RNase-Free DNase Set Qiagen Cat# 79254 Qubit TM RNA High Sensitivity kit ThermoFisher Scientific Cat# Q32852 Tecan’s Ovation® RNA-Seq System V2 Tecan Cat# 7102 Tecan’s Celero TM EZ DNA-Seq Tecan Cat# 30188860 TruSeq Stranded mRNA Library Prep Illumina Cat# 20020594 Lactate-Glo Assay Promega Cat# J5021 Qubit Protein Assay ThermoFisher Scientific Cat# Q33211 (Continued on next page) Cell Reports 45, 117069, March 24, 2026 11 .. C57BL/6J mice were purchased from Jackson Laboratory (stock number 000664).
RNA sequencing:Article Title: Glycogen and lactate metabolism in mouse fetal Sertoli cells sustain the germ line.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Glycogen Otto Baba 27 IV58B6 AMH Santa Cruz Cat#sc-6886; RRID: AB_649207 FOXL2 Abcam Cat# ab5096; RRID: AB_304750 FOXL2 Dagmar Williams RRID: AB_2687958 NR5A1 Cosmo Bio Cat# KO610; RRID: AB_3696859 PPP1R3C Proteintech Cat# 29424-1-AP; RRID: AB_2918304 PYGB Proteintech Cat# 12075-1-AP; RRID: AB_2174885 SOX9 Milipore Cat# AB5535; RRID: AB_2239761 SOX9 R&D systems Cat# AF3075; RRID: AB_2194160 SRY Dagmar Williams RRID: AB_2687957 Ki-67 BD Cat# 550609; RRID: AB_393778 CC3 Cell Signaling Cat# 9661; RRID: AB_2341188 DDX4 Abcam Cat# ab13840; RRID: AB_443012 TRA98 Abcam Cat# ab82527; RRID: AB_1659152 MCT1 Milipore Cat# AB1286; RRID: AB_11212410 MCT4 Santa Cruz Cat# sc-376140; RRID: AB_10992036 HuC/D Vanda Lennon RRID: AB_2813895 Alexa Fluor 488-Anti-Mouse Invitrogen Cat# A21202; RRID: AB_141607 Alexa Fluor 488-Anti-Rabbit Invitrogen Cat# A21206; RRID: AB_2535792 Alexa Fluor 488-Anti-Rat Invitrogen Cat# A21208; RRID: AB_2535794 Alexa Fluor 488-Anti-Goat Invitrogen Cat# A11055; RRID: AB_2534102 Alexa Fluor 568-Anti-Mouse Invitrogen Cat# A10037; RRID: AB_11180865 Alexa Fluor 568-Anti-Rabbit Invitrogen Cat# A10042; RRID: AB_2534017 Alexa Fluor 568-Anti-Rat Invitrogen Cat# A78946; RRID: AB_2910653 Alexa Fluor 568-Anti-Goat Invitrogen Cat# A11057; RRID: AB_142581 Alexa Fluor 647-Anti-Mouse Invitrogen Cat# A31571; RRID: AB_162542 Alexa Fluor 647-Anti-Rabbit Invitrogen Cat# A31573; RRID: AB_2536183 DyLight650-Anti-Rat Invitrogen Cat# SA510029; RRID: AB_2556609 Alexa Fluor 647-Anti-Goat Invitrogen Cat# A21447; RRID: AB_2535864 Cy5-Anti-Chicken Jackson Cat# 703-175-155; RRID: AB_2340365 Chemicals, peptides, and recombinant proteins CP 316819 (GPI) Sigma-Aldrich Cat# PZ0189 Syrosingopine medchemexpress Cat# HY-N4115 Sodium L-Lactate Sigma-Aldrich Cat# L7022 D-glucose Macron Chemicals Cat# 4912-12 Critical commercial assays Arcturus TM PicoPure TM RNA Isolation Kit Applied Biosystems Cat# KIT0204 RNase-Free DNase Set Qiagen Cat# 79254 Qubit TM RNA High Sensitivity kit ThermoFisher Scientific Cat# Q32852 Tecan’s Ovation® RNA-Seq System V2 Tecan Cat# 7102 Tecan’s Celero TM EZ DNA-Seq Tecan Cat# 30188860 TruSeq Stranded mRNA Library Prep Illumina Cat# 20020594 Lactate-Glo Assay Promega Cat# J5021 Qubit Protein Assay ThermoFisher Scientific Cat# Q33211 (Continued on next page) Cell Reports 45, 117069, March 24, 2026 11 .. C57BL/6J mice were purchased from Jackson Laboratory (stock number 000664).
DNA Sequencing:Article Title: Glycogen and lactate metabolism in mouse fetal Sertoli cells sustain the germ line.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Glycogen Otto Baba 27 IV58B6 AMH Santa Cruz Cat#sc-6886; RRID: AB_649207 FOXL2 Abcam Cat# ab5096; RRID: AB_304750 FOXL2 Dagmar Williams RRID: AB_2687958 NR5A1 Cosmo Bio Cat# KO610; RRID: AB_3696859 PPP1R3C Proteintech Cat# 29424-1-AP; RRID: AB_2918304 PYGB Proteintech Cat# 12075-1-AP; RRID: AB_2174885 SOX9 Milipore Cat# AB5535; RRID: AB_2239761 SOX9 R&D systems Cat# AF3075; RRID: AB_2194160 SRY Dagmar Williams RRID: AB_2687957 Ki-67 BD Cat# 550609; RRID: AB_393778 CC3 Cell Signaling Cat# 9661; RRID: AB_2341188 DDX4 Abcam Cat# ab13840; RRID: AB_443012 TRA98 Abcam Cat# ab82527; RRID: AB_1659152 MCT1 Milipore Cat# AB1286; RRID: AB_11212410 MCT4 Santa Cruz Cat# sc-376140; RRID: AB_10992036 HuC/D Vanda Lennon RRID: AB_2813895 Alexa Fluor 488-Anti-Mouse Invitrogen Cat# A21202; RRID: AB_141607 Alexa Fluor 488-Anti-Rabbit Invitrogen Cat# A21206; RRID: AB_2535792 Alexa Fluor 488-Anti-Rat Invitrogen Cat# A21208; RRID: AB_2535794 Alexa Fluor 488-Anti-Goat Invitrogen Cat# A11055; RRID: AB_2534102 Alexa Fluor 568-Anti-Mouse Invitrogen Cat# A10037; RRID: AB_11180865 Alexa Fluor 568-Anti-Rabbit Invitrogen Cat# A10042; RRID: AB_2534017 Alexa Fluor 568-Anti-Rat Invitrogen Cat# A78946; RRID: AB_2910653 Alexa Fluor 568-Anti-Goat Invitrogen Cat# A11057; RRID: AB_142581 Alexa Fluor 647-Anti-Mouse Invitrogen Cat# A31571; RRID: AB_162542 Alexa Fluor 647-Anti-Rabbit Invitrogen Cat# A31573; RRID: AB_2536183 DyLight650-Anti-Rat Invitrogen Cat# SA510029; RRID: AB_2556609 Alexa Fluor 647-Anti-Goat Invitrogen Cat# A21447; RRID: AB_2535864 Cy5-Anti-Chicken Jackson Cat# 703-175-155; RRID: AB_2340365 Chemicals, peptides, and recombinant proteins CP 316819 (GPI) Sigma-Aldrich Cat# PZ0189 Syrosingopine medchemexpress Cat# HY-N4115 Sodium L-Lactate Sigma-Aldrich Cat# L7022 D-glucose Macron Chemicals Cat# 4912-12 Critical commercial assays Arcturus TM PicoPure TM RNA Isolation Kit Applied Biosystems Cat# KIT0204 RNase-Free DNase Set Qiagen Cat# 79254 Qubit TM RNA High Sensitivity kit ThermoFisher Scientific Cat# Q32852 Tecan’s Ovation® RNA-Seq System V2 Tecan Cat# 7102 Tecan’s Celero TM EZ DNA-Seq Tecan Cat# 30188860 TruSeq Stranded mRNA Library Prep Illumina Cat# 20020594 Lactate-Glo Assay Promega Cat# J5021 Qubit Protein Assay ThermoFisher Scientific Cat# Q33211 (Continued on next page) Cell Reports 45, 117069, March 24, 2026 11 .. C57BL/6J mice were purchased from Jackson Laboratory (stock number 000664).
Qubit Protein Assay:Article Title: Glycogen and lactate metabolism in mouse fetal Sertoli cells sustain the germ line.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies Glycogen Otto Baba 27 IV58B6 AMH Santa Cruz Cat#sc-6886; RRID: AB_649207 FOXL2 Abcam Cat# ab5096; RRID: AB_304750 FOXL2 Dagmar Williams RRID: AB_2687958 NR5A1 Cosmo Bio Cat# KO610; RRID: AB_3696859 PPP1R3C Proteintech Cat# 29424-1-AP; RRID: AB_2918304 PYGB Proteintech Cat# 12075-1-AP; RRID: AB_2174885 SOX9 Milipore Cat# AB5535; RRID: AB_2239761 SOX9 R&D systems Cat# AF3075; RRID: AB_2194160 SRY Dagmar Williams RRID: AB_2687957 Ki-67 BD Cat# 550609; RRID: AB_393778 CC3 Cell Signaling Cat# 9661; RRID: AB_2341188 DDX4 Abcam Cat# ab13840; RRID: AB_443012 TRA98 Abcam Cat# ab82527; RRID: AB_1659152 MCT1 Milipore Cat# AB1286; RRID: AB_11212410 MCT4 Santa Cruz Cat# sc-376140; RRID: AB_10992036 HuC/D Vanda Lennon RRID: AB_2813895 Alexa Fluor 488-Anti-Mouse Invitrogen Cat# A21202; RRID: AB_141607 Alexa Fluor 488-Anti-Rabbit Invitrogen Cat# A21206; RRID: AB_2535792 Alexa Fluor 488-Anti-Rat Invitrogen Cat# A21208; RRID: AB_2535794 Alexa Fluor 488-Anti-Goat Invitrogen Cat# A11055; RRID: AB_2534102 Alexa Fluor 568-Anti-Mouse Invitrogen Cat# A10037; RRID: AB_11180865 Alexa Fluor 568-Anti-Rabbit Invitrogen Cat# A10042; RRID: AB_2534017 Alexa Fluor 568-Anti-Rat Invitrogen Cat# A78946; RRID: AB_2910653 Alexa Fluor 568-Anti-Goat Invitrogen Cat# A11057; RRID: AB_142581 Alexa Fluor 647-Anti-Mouse Invitrogen Cat# A31571; RRID: AB_162542 Alexa Fluor 647-Anti-Rabbit Invitrogen Cat# A31573; RRID: AB_2536183 DyLight650-Anti-Rat Invitrogen Cat# SA510029; RRID: AB_2556609 Alexa Fluor 647-Anti-Goat Invitrogen Cat# A21447; RRID: AB_2535864 Cy5-Anti-Chicken Jackson Cat# 703-175-155; RRID: AB_2340365 Chemicals, peptides, and recombinant proteins CP 316819 (GPI) Sigma-Aldrich Cat# PZ0189 Syrosingopine medchemexpress Cat# HY-N4115 Sodium L-Lactate Sigma-Aldrich Cat# L7022 D-glucose Macron Chemicals Cat# 4912-12 Critical commercial assays Arcturus TM PicoPure TM RNA Isolation Kit Applied Biosystems Cat# KIT0204 RNase-Free DNase Set Qiagen Cat# 79254 Qubit TM RNA High Sensitivity kit ThermoFisher Scientific Cat# Q32852 Tecan’s Ovation® RNA-Seq System V2 Tecan Cat# 7102 Tecan’s Celero TM EZ DNA-Seq Tecan Cat# 30188860 TruSeq Stranded mRNA Library Prep Illumina Cat# 20020594 Lactate-Glo Assay Promega Cat# J5021 Qubit Protein Assay ThermoFisher Scientific Cat# Q33211 (Continued on next page) Cell Reports 45, 117069, March 24, 2026 11 .. C57BL/6J mice were purchased from Jackson Laboratory (stock number 000664).
Immunocytochemistry:Article Title: Three donor-matched iPSC lines derived from human postmortem dura mater for modeling neurodegenerative diseases
Article Snippet: .. Antibodies used for immunocytochemistry Antibody Dilution Company Cat # RRID Undifferentiated hPSC markers Mouse antiSSEA4 1:500 Thermo Fisher Scientific Cat# 41-4000 RRID:AB_1502065 Undifferentiated hPSC markers Rabbit antiSOX2 1:500 Abcam Cat# ab97959 RRID:AB_2341193 Undifferentiated hPSC markers Rabbit antiOCT4 1:500 Abcam Cat# ab181557 RRID:AB_2687916 Undifferentiated hPSC markers Mouse antiTRA-1-60 1:1000 Cell Signaling Technology Cat# 4746 RRID:AB_2119059 Undifferentiated hPSC markers Rabbit antiNANOG 1:250 Abcam Cat# ab109250 RRID:AB_10863442 Secondary antibody Goat antiMouse 488 1:500 Thermo Fisher Scientific Cat# A-11001 RRID:AB_2534069 Secondary antibody Goat antiMouse 594 1:500 Thermo Fisher Scientific Cat# A-11005 RRID:AB_2534073 Secondary antibody Goat antiRabbit 488 1:500 Thermo Fisher Scientific Cat# A-11008 RRID:AB_143165 Secondary antibody Goat antiRabbit 594 1:500 Thermo Fisher Scientific Cat# A-11012 RRID:AB_2534079 Nuclear stain DAPI 1:1000 Thermo Fisher Scientific Cat# 62248 RRID:AB_3720171 Primers .. PCR Target Forward/Reverse primer (5′-3′) Vector detection c-Myc transgene TAACTGACTAGCAGGCTTGTCG/ TCCACATACAGTCCTGGATGATGATG Vector detection KOS transgene TAACTGACTAGCAGGCTTGTCG/ TCCACATACAGTCCTGGATGATGATG Vector detection Klf4 transgene TTCCTGCATGCCAGAGGAGCCC/ AATGTATCGAAGGTGCTCAA Vector detection SeV transgene GGATCACTAGGTGATATCGAGC/ ACCAGACAAGAGTTTAAGAGATATGTATC qRT-PCR primers for undifferentiated hPSC– associated genes with SYBR Green chemistry Target Forward/Reverse primer (5′-3′) Undifferentiated hPSC markers OCT4 GACAGGGGGAGGGGAGGAGCTAGG/ CTTCCCTCCAACCAGTTGCCCCAAAC Undifferentiated hPSC markers SOX2 GGGAAATGGGAGGGGTGCAAAAGAGG/ TTGCGTGAGTGTGGATGGGATTGGTG Undifferentiated hPSC markers NANOG TGCAAGAACTCTCCAACATCCT/ ATTGCTATTCTTCGGCCAGTT
Staining:Article Title: Three donor-matched iPSC lines derived from human postmortem dura mater for modeling neurodegenerative diseases
Article Snippet: .. Antibodies used for immunocytochemistry Antibody Dilution Company Cat # RRID Undifferentiated hPSC markers Mouse antiSSEA4 1:500 Thermo Fisher Scientific Cat# 41-4000 RRID:AB_1502065 Undifferentiated hPSC markers Rabbit antiSOX2 1:500 Abcam Cat# ab97959 RRID:AB_2341193 Undifferentiated hPSC markers Rabbit antiOCT4 1:500 Abcam Cat# ab181557 RRID:AB_2687916 Undifferentiated hPSC markers Mouse antiTRA-1-60 1:1000 Cell Signaling Technology Cat# 4746 RRID:AB_2119059 Undifferentiated hPSC markers Rabbit antiNANOG 1:250 Abcam Cat# ab109250 RRID:AB_10863442 Secondary antibody Goat antiMouse 488 1:500 Thermo Fisher Scientific Cat# A-11001 RRID:AB_2534069 Secondary antibody Goat antiMouse 594 1:500 Thermo Fisher Scientific Cat# A-11005 RRID:AB_2534073 Secondary antibody Goat antiRabbit 488 1:500 Thermo Fisher Scientific Cat# A-11008 RRID:AB_143165 Secondary antibody Goat antiRabbit 594 1:500 Thermo Fisher Scientific Cat# A-11012 RRID:AB_2534079 Nuclear stain DAPI 1:1000 Thermo Fisher Scientific Cat# 62248 RRID:AB_3720171 Primers .. PCR Target Forward/Reverse primer (5′-3′) Vector detection c-Myc transgene TAACTGACTAGCAGGCTTGTCG/ TCCACATACAGTCCTGGATGATGATG Vector detection KOS transgene TAACTGACTAGCAGGCTTGTCG/ TCCACATACAGTCCTGGATGATGATG Vector detection Klf4 transgene TTCCTGCATGCCAGAGGAGCCC/ AATGTATCGAAGGTGCTCAA Vector detection SeV transgene GGATCACTAGGTGATATCGAGC/ ACCAGACAAGAGTTTAAGAGATATGTATC qRT-PCR primers for undifferentiated hPSC– associated genes with SYBR Green chemistry Target Forward/Reverse primer (5′-3′) Undifferentiated hPSC markers OCT4 GACAGGGGGAGGGGAGGAGCTAGG/ CTTCCCTCCAACCAGTTGCCCCAAAC Undifferentiated hPSC markers SOX2 GGGAAATGGGAGGGGTGCAAAAGAGG/ TTGCGTGAGTGTGGATGGGATTGGTG Undifferentiated hPSC markers NANOG TGCAAGAACTCTCCAACATCCT/ ATTGCTATTCTTCGGCCAGTT
Incubation:Article Title: Calcium-mediated calreticulin-IRE1α interaction drives dynamic fluctuation of IRE1α activity under chronic endoplasmic reticulum stress.
Article Snippet: .. Following primary antibodies (ATF-4 (D4B8) Rabbit mAb, cell Signaling Technology, Cat# 11815, RRID:AB_2616025; BIP (C50B12) Rabbit mAb, Cell Signaling Technology, Cat# 3177, RRID:AB_2119845; Calreticulin (F-4), Santa Cruz, Cat# sc-373863, RRID:AB_10915425; Caspase-3 (D3R6Y) Rabbit mAb, Cell Signaling Technology, Cat# 14220; RRID:AB_2798429; CHOP (L63F7) Mouse mAb; Cell Signaling Technology, Cat# 2895, RRID:AB_2089254; Cleaved Caspase-3 (Asp175) Rabbit polyclonal, Cell Signaling Technology, Cat# 9661, RRID:AB_2341188; GAPDH (0411) Mouse mAb, Santa Cruz, Cat# sc-47724, RRID:AB_627678; IRE1α (14C10) Rabbit mAb, Cell Signaling Technology, Cat# 3294, RRID:AB_823545; PERK (C33E10) Rabbit mAb, Cell Signaling Technology, Cat# 3192S, RRID:AB_2097453; Phosphor-IRE1α (S724) Rabbit mAb, Abcam, Cat# ab124945, RRID:AB_11001365; ATF6(NBP11-75478) Rabbit polyclonal, Novus Biologicals, Cat# NBP1175478, RRID:AB_11008989; Calnexin Rabbit polyclonal, Abcam, Cat# ab22595, RRID:AB_2069006; β-actin Mouse mAb, Proteintech, Cat# 66009-1-Ig, RRID:AB_2687938; GFP Mouse mAb, sigma, Cat# 111814460001, RRID:AB_10611456, His Mouse mAb, proteintech, Cat# 66005-1-lg, RRID:AB_2687586, HA Rabbit polyclonal, proteintech, Cat# CL647-51064-2, RRID:AB_2868213, Phospho-SAPK/JNK (Thr183/Tyr185) Rabbit polyclonal, Cell Signaling Technology, Cat# 9251, RRID:AB_331659; SAPK/JNK Rabbit polyclonal, Cell Signaling Technology, Cat# 9252, RRID:AB_2250373; XBP-1s (D2C1F) Rabbit mAb, Cell Signaling AR TI CL E IN P RE SS Technology, Cat# 12782, RRID:AB_2687943) incubation, the membranes were probed with horseradish peroxidase (HRP)-conjugated secondary antibodies for 1 h at room temperature. .. Protein signals were visualized using the ChemiScope Mini imaging system (Clinx Science) with ECL Plus Detection Reagent (LABLEAD, Cat# E1050-1).
other:Article Title: Delactylation of the tumor suppressor ARHGDIB drives metastasis and chemoresistance in bladder cancer.
Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Antibodies ARHGDIB Proteintech Cat# 16122-1-AP; RRID:AB_2059596 DYKDDDDK tag Proteintech Cat# 20543-1-AP; RRID:AB_11232216 HA tag Proteintech Cat# 51064-2-AP; RRID:AB_11042321 L-lactyl lysine PTM Bio Cat# PTM-1401RM; RRID:AB_2942013 Acetyllysine PTM Bio Cat# PTM-101; RRID:AB_2940830 β-actin Proteintech Cat# 66009-1-Ig; RRID:AB_2687938 α-Tubulin Proteintech Cat# 66031-1-Ig; RRID:AB_11042766 GAPDH Proteintech Cat# 60004-1-Ig; RRID:AB_2107436 GST tag Proteintech Cat# 66001-2-Ig; RRID:AB_2881488 His tag Proteintech Cat# 66005-1-Ig; RRID:AB_11232599 HDAC2 Proteintech Cat# 12922-3-AP; RRID:AB_2118516 LDHA Proteintech Cat# 19987-1-AP; RRID:AB_10646429 LDHB Proteintech Cat# 14824-1-AP; RRID:AB_2134953 CREBBP Proteintech Cat# 22277-1-AP; RRID:AB_3085692 P300 Proteintech Cat# 20695-1-AP; RRID:AB_3085614 γ-H2AX Abcam Cat# ab303656; RRID:AB_3673124 Cleaved Caspase3 Cell Signaling Technology Cat# 9661; RRID:AB_2341188 PARP1 Proteintech Cat# 13371-1-AP; RRID:AB_2160459 Cleaved PARP (Asp214) Cell Signaling Technology Cat# 5625; RRID:AB_10699459 BAX Proteintech Cat# 60267-1-Ig; RRID:AB_2848213 BCL2 Proteintech Cat# 12789-1-AP; RRID:AB_2227948 RAC1 Proteintech Cat# 66122-1-Ig; RRID:AB_2881521 RAD51 Abcam Cat# ab133534; RRID:AB_2722613 53BP1 Cell Signaling Technology Cat# 88439; RRID:AB_3095656 ATM Proteintech Cat# 27156-1-AP; RRID:AB_2880780 ATR Proteintech Cat# 19787-1-AP; RRID:AB_10639516 Phospho-ATM (Ser1981) Cell Signaling Technology Cat# 13050; RRID:AB_2798100 Phospho-ATR (Ser428) Cell Signaling Technology Cat# 2853; RRID:AB_2290281 CHK1 Cell Signaling Technology Cat# 2360; RRID:AB_2080320 CHK2 Cell Signaling Technology Cat# 2662; RRID:AB_2080793 Phospho-Chk1 (Ser345) Cell Signaling Technology Cat# 2348; RRID:AB_331212 Phospho-Chk2 (Thr68) Cell Signaling Technology Cat# 2197; RRID:AB_2080501 Phospho-BRCA1 (Ser1524) Cell Signaling Technology Cat# 9009; RRID:AB_491003 BRCA1 Cell Signaling Technology Cat#9010; RRID:AB_2228244 BRCA2 Cell Signaling Technology Cat# 10741; RRID:AB_2797730 MRE11 Cell Signaling Technology Cat# 4847; RRID:AB_10693469 Phospho-Mre11 (Ser676) Cell Signaling Technology Cat# 4859; RRID:AB_2145096 RAD50 Cell Signaling Technology Cat# 3427; RRID:AB_2176936 p95/NBS1 Cell Signaling Technology Cat# 14956; RRID:AB_2798660 Phospho-p95/NBS1 (Ser343) Cell Signaling Technology Cat# 3001; RRID:AB_10829154 Ki-67 Cell Signaling Technology Cat# 9449; RRID:AB_2715512 p44/42 MAPK (Erk1/2) Cell Signaling Technology Cat# 4695; RRID:AB_390779 (Continued on next page) Cell Reports 45, 116941, February 24, 2026 19
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