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Ridom GmbH seqsphere+ database
Geographic distribution of Italian wild birds analyzed. Geographical mapping of wild birds was obtained with Ridom <t>SeqSphere+</t> v4.1.1 software using the geographical coordinates found from “city” entries. Colors within the mapped circle correspond to the wild bird species reported in the legend.
Seqsphere+ Database, supplied by Ridom GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/ridom+seqsphere/seqsphere++database/pmc07238051-197-18-21
Average 90 stars, based on 1 article reviews
seqsphere+ database - by Bioz Stars, 2026-09
90/100 stars

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1) Product Images from "Molecular Characterization and Antimicrobial Susceptibility of C. jejuni Isolates from Italian Wild Bird Populations"

Article Title: Molecular Characterization and Antimicrobial Susceptibility of C. jejuni Isolates from Italian Wild Bird Populations

Journal: Pathogens

doi: 10.3390/pathogens9040304

Geographic distribution of Italian wild birds analyzed. Geographical mapping of wild birds was obtained with Ridom SeqSphere+ v4.1.1 software using the geographical coordinates found from “city” entries. Colors within the mapped circle correspond to the wild bird species reported in the legend.
Figure Legend Snippet: Geographic distribution of Italian wild birds analyzed. Geographical mapping of wild birds was obtained with Ridom SeqSphere+ v4.1.1 software using the geographical coordinates found from “city” entries. Colors within the mapped circle correspond to the wild bird species reported in the legend.

Techniques Used: Software

Related Articles

Generated:

Article Title: A combined case-control and molecular source attribution study of human Campylobacter infections in Germany, 2011–2014
Article Snippet: Sequence reads were imported into a SeqSphere+ (Ridom Bioinformatics GmbH, Münster, Germany) database for further processing and assignment to known sequence types (STs).

Article Title: Genomic and Antimicrobial Surveillance of Campylobacter Population in Italian Poultry.
Article Snippet: The cgMLST profiles were assigned using a C. jejuni/coli task template with 637 target core genomes available in the Ridom SeqSphere+ database (https://www.ridom.de/seqsphere/u/Task_Template_Sphere.html, accessed on 14 March 2022).

Article Title: Molecular Characterization and Antimicrobial Susceptibility of C. jejuni Isolates from Italian Wild Bird Populations
Article Snippet: The cgMLST profiles were assigned using C.jejuni task template with 949 target core genomes available in the Ridom SeqSphere+ database ( https://www.ridom.de/seqsphere/u/Task_Template_Sphere.html ).

Article Title: Genomic and Antimicrobial Surveillance of Campylobacter Population in Italian Poultry
Article Snippet: The cgMLST profiles were assigned using a C. jejuni /coli task template with 637 target core genomes available in the Ridom SeqSphere+ database ( https://www.ridom.de/seqsphere/u/Task_Template_Sphere.html , accessed on 14 March 2022).

Article Title: Assessing mutation accumulation in DNA repair-deficient Listeria monocytogenes : implications for cgMLST cluster thresholds in outbreak analysis
Article Snippet: All isolates are routinely typed using cgMLST analysis based on the method established by Ruppitsch et al. ( ). and are stored in a Ridom SeqSphere+ database, which currently contains over 22,000 sequences (as of September 3 rd , 2024) and is expanded by approximately 3,000 sequences annually.

Article Title: A combined case-control and molecular source attribution study of human Campylobacter infections in Germany, 2011–2014
Article Snippet: Results were uploaded to a SeqSphere (Ridom Bioinformatics GmbH; Münster, Germany) database.

Article Title: Isolate-Based Surveillance of Listeria monocytogenes by Whole Genome Sequencing in Austria
Article Snippet: WGS data from 1,960 L. monocytogenes isolates including 36 human and 1924 non-human isolates, recovered from Austrian samples in the year 2017, were available at the SeqSphere + database (Ridom© GmbH, Münster, Germany).

Software:

Article Title: A combined case-control and molecular source attribution study of human Campylobacter infections in Germany, 2011–2014
Article Snippet: Sequence reads were imported into a SeqSphere+ (Ridom Bioinformatics GmbH, Münster, Germany) database for further processing and assignment to known sequence types (STs).

Article Title: Genomic and Antimicrobial Surveillance of Campylobacter Population in Italian Poultry.
Article Snippet: The cgMLST profiles were assigned using a C. jejuni/coli task template with 637 target core genomes available in the Ridom SeqSphere+ database (https://www.ridom.de/seqsphere/u/Task_Template_Sphere.html, accessed on 14 March 2022).

Article Title: Molecular Characterization and Antimicrobial Susceptibility of C. jejuni Isolates from Italian Wild Bird Populations
Article Snippet: The cgMLST profiles were assigned using C.jejuni task template with 949 target core genomes available in the Ridom SeqSphere+ database ( https://www.ridom.de/seqsphere/u/Task_Template_Sphere.html ).

Article Title: Genomic and Antimicrobial Surveillance of Campylobacter Population in Italian Poultry
Article Snippet: The cgMLST profiles were assigned using a C. jejuni /coli task template with 637 target core genomes available in the Ridom SeqSphere+ database ( https://www.ridom.de/seqsphere/u/Task_Template_Sphere.html , accessed on 14 March 2022).

Article Title: Assessing mutation accumulation in DNA repair-deficient Listeria monocytogenes : implications for cgMLST cluster thresholds in outbreak analysis
Article Snippet: All isolates are routinely typed using cgMLST analysis based on the method established by Ruppitsch et al. ( ). and are stored in a Ridom SeqSphere+ database, which currently contains over 22,000 sequences (as of September 3 rd , 2024) and is expanded by approximately 3,000 sequences annually.

Article Title: A combined case-control and molecular source attribution study of human Campylobacter infections in Germany, 2011–2014
Article Snippet: Results were uploaded to a SeqSphere (Ridom Bioinformatics GmbH; Münster, Germany) database.

Article Title: Isolate-Based Surveillance of Listeria monocytogenes by Whole Genome Sequencing in Austria
Article Snippet: WGS data from 1,960 L. monocytogenes isolates including 36 human and 1924 non-human isolates, recovered from Austrian samples in the year 2017, were available at the SeqSphere + database (Ridom© GmbH, Münster, Germany).

Sequencing:

Article Title: A combined case-control and molecular source attribution study of human Campylobacter infections in Germany, 2011–2014
Article Snippet: Sequence reads were imported into a SeqSphere+ (Ridom Bioinformatics GmbH, Münster, Germany) database for further processing and assignment to known sequence types (STs).

Article Title: Genomic and Antimicrobial Surveillance of Campylobacter Population in Italian Poultry.
Article Snippet: The cgMLST profiles were assigned using a C. jejuni/coli task template with 637 target core genomes available in the Ridom SeqSphere+ database (https://www.ridom.de/seqsphere/u/Task_Template_Sphere.html, accessed on 14 March 2022).

Article Title: Molecular Characterization and Antimicrobial Susceptibility of C. jejuni Isolates from Italian Wild Bird Populations
Article Snippet: The cgMLST profiles were assigned using C.jejuni task template with 949 target core genomes available in the Ridom SeqSphere+ database ( https://www.ridom.de/seqsphere/u/Task_Template_Sphere.html ).

Article Title: Genomic and Antimicrobial Surveillance of Campylobacter Population in Italian Poultry
Article Snippet: The cgMLST profiles were assigned using a C. jejuni /coli task template with 637 target core genomes available in the Ridom SeqSphere+ database ( https://www.ridom.de/seqsphere/u/Task_Template_Sphere.html , accessed on 14 March 2022).

Article Title: Assessing mutation accumulation in DNA repair-deficient Listeria monocytogenes : implications for cgMLST cluster thresholds in outbreak analysis
Article Snippet: All isolates are routinely typed using cgMLST analysis based on the method established by Ruppitsch et al. ( ). and are stored in a Ridom SeqSphere+ database, which currently contains over 22,000 sequences (as of September 3 rd , 2024) and is expanded by approximately 3,000 sequences annually.

Article Title: A combined case-control and molecular source attribution study of human Campylobacter infections in Germany, 2011–2014
Article Snippet: Results were uploaded to a SeqSphere (Ridom Bioinformatics GmbH; Münster, Germany) database.

Article Title: Isolate-Based Surveillance of Listeria monocytogenes by Whole Genome Sequencing in Austria
Article Snippet: WGS data from 1,960 L. monocytogenes isolates including 36 human and 1924 non-human isolates, recovered from Austrian samples in the year 2017, were available at the SeqSphere + database (Ridom© GmbH, Münster, Germany).



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