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massarray assaydesign 3.0 software (Sequenom)

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Sequenom massarray assaydesign 3.0 software
Massarray Assaydesign 3.0 Software, supplied by Sequenom, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/massarray+assaydesign+software/massarray+assay+design+3+0+software/pmc03402522-57-14-18
Average 90 stars, based on 1 article reviews

massarray assaydesign 3.0 software - by Bioz Stars, 2026-11

90/100 stars

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Polymerase Chain Reaction:

Article Title: Association of iron homeostasis-related gene polymorphisms with pregnancy and neonatal outcomes in patients with gestational diabetes mellitus
Article Snippet: .. Sequenom Genotyping Tools and MassArray Assay Design were used to design PCR amplification primers and single-base extension primers for the test site. ..

Amplification:

other:

Article Title: Frequency of Tumor Necrosis Factor-α, Interleukin-6, and Interleukin-10 Gene Polymorphisms in Mexican Patients with Diabetic Retinopathy and Diabetic Kidney Disease.
Article Snippet: The 4 PCR primer pairs and 4 probes for TNF-α rs361525, TNF-α rs1800629, IL-10 rs1800872, and IL-10 rs1800871 were designed using MassARRAY Assay Design v 3.1 software (Sequenom, Inc., San Diego, CA, USA) with the following design parameters: locus-specific primer sizes between 12 and 30 nucleotides, average sizes of amplicons between 80 and 120 base pairs (bp), an annealing temperature between 45 and 100 ◦C, optimal robustness of 0.8 in loop formation, dimers and false amplification primers, average robustness in dimer formation and false primer extension of 0.5, a spectrometric range of 4 to 10 kDa, a separation distance between SNPs of 15 Da, and a maximum multiplexing number of 8 SNPs.

Article Title: FCRL3 genetic variants drive autoimmune pathogenesis in multiple sclerosis and neuromyelitis optica spectrum disorders
Article Snippet: PCR and extension primers were designed using MassArray Assay Design 3.1 software (Sequenom, San Diego, CA, USA) ( ).

Article Title: Frequency of Tumor Necrosis Factor-α, Interleukin-6, and Interleukin-10 Gene Polymorphisms in Mexican Patients with Diabetic Retinopathy and Diabetic Kidney Disease
Article Snippet: The 4 PCR primer pairs and 4 probes for TNF-α rs361525, TNF-α rs1800629, IL-10 rs1800872, and IL-10 rs1800871 were designed using MassARRAY Assay Design v 3.1 software (Sequenom, Inc., San Diego, CA, USA) with the following design parameters: locus-specific primer sizes between 12 and 30 nucleotides, average sizes of amplicons between 80 and 120 base pairs (bp), an annealing temperature between 45 and 100 °C, optimal robustness of 0.8 in loop formation, dimers and false amplification primers, average robustness in dimer formation and false primer extension of 0.5, a spectrometric range of 4 to 10 kDa, a separation distance between SNPs of 15 Da, and a maximum multiplexing number of 8 SNPs.

Mass Spectrometry:

Article Title: Interactions between ABC gene polymorphisms and processing speed in predicting depression severity
Article Snippet: .. Peripheral blood DNA was extracted using Trizol technology, and genotyping was conducted using the MassARRAY ® Analyzer 4 platform (Sequenom, San Diego, CA) employing matrix-assisted laser desorption ionization time-of-flight (MALDI-TOF) mass spectrometry. .. Allele and genotype frequency analyses were performed using R studio version (4.0.2).