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genesifter microarray data analysis system  (VizX Labs)

 
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    VizX Labs genesifter microarray data analysis system
    Validation of <t>microarray</t> data . Total RNA was extracted from four independent HeLa cell infections with indicated shRNA vectors for five days including aliquots of RNA for microarray analysis. Quantitative real-time RT-PCR was carried out to measure the expression level of indicated mRNA. The fold-change was calculated and represents the change in transcript levels in shRNA T2 or T1 infected cells relative to shRNA MM treated cells after normalization to housekeeping gene, GAPDH. Average fold-change from the four independent infections is presented. * p < 0.05, ** p < 0.005, *** p < 0.0005 in a paired t-test.
    Genesifter Microarray Data Analysis System, supplied by VizX Labs, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/genesifter%C2%AE+microarray+expression+analysis+software/genesifter+microarray+data+analysis+system/pmc03160394-521-7-12
    Average 90 stars, based on 1 article reviews
    genesifter microarray data analysis system - by Bioz Stars, 2026-09
    90/100 stars

    Images

    1) Product Images from "Limited redundancy in genes regulated by Cyclin T2 and Cyclin T1"

    Article Title: Limited redundancy in genes regulated by Cyclin T2 and Cyclin T1

    Journal: BMC Research Notes

    doi: 10.1186/1756-0500-4-260

    Validation of microarray data . Total RNA was extracted from four independent HeLa cell infections with indicated shRNA vectors for five days including aliquots of RNA for microarray analysis. Quantitative real-time RT-PCR was carried out to measure the expression level of indicated mRNA. The fold-change was calculated and represents the change in transcript levels in shRNA T2 or T1 infected cells relative to shRNA MM treated cells after normalization to housekeeping gene, GAPDH. Average fold-change from the four independent infections is presented. * p < 0.05, ** p < 0.005, *** p < 0.0005 in a paired t-test.
    Figure Legend Snippet: Validation of microarray data . Total RNA was extracted from four independent HeLa cell infections with indicated shRNA vectors for five days including aliquots of RNA for microarray analysis. Quantitative real-time RT-PCR was carried out to measure the expression level of indicated mRNA. The fold-change was calculated and represents the change in transcript levels in shRNA T2 or T1 infected cells relative to shRNA MM treated cells after normalization to housekeeping gene, GAPDH. Average fold-change from the four independent infections is presented. * p < 0.05, ** p < 0.005, *** p < 0.0005 in a paired t-test.

    Techniques Used: Biomarker Discovery, Microarray, shRNA, Quantitative RT-PCR, Expressing, Infection

    Related Articles

    other:

    Article Title: Effects of extracellular matrix and neighboring cells on induction of human embryonic stem cells into retinal or retinal pigment epithelial progenitors
    Article Snippet: Data was analyzed with Affymetrix Micro array Suite 5.0, and GeneSifter web-based microarray analysis system (VizX Labs, Seattle, WA).

    Microarray:

    Article Title: Modulation of the anti-cancer efficacy of microtubule-targeting agents by cellular growth conditions
    Article Snippet: .. Data was processed with the GeneSifter (VizX Labs) microarray analysis system. ..

    Article Title: Modulation of the anti-cancer efficacy of microtubule-targeting agents by cellular growth conditions
    Article Snippet: .. Microarray data was processed with the GeneSifter (VizX Labs) microarray analysis system. .. We screened the data by eliminating genes that changed by less than 2-fold, and by only including genes that were flagged as “P” or “present” by the Affymetrix MAS5 algorithm.

    Article Title: Disseminated and Rapidly Fatal Tuberculosis in Mice Bearing a Defective Allele AT IRF-8
    Article Snippet: .. The GeneSifter TM microarray data analysis system (VizX Labs, Seattle, WA, USA; www.genesifter.net ) was used to analyze data generated from comparisons between control (uninfected) and M. tuberculosis -infected (Day 30 and 70) groups for B6 mice. ..

    Article Title: Human pluripotent embryonic stem cells produced by nuclear transfer using a somatic cell nucleus treated with HVJ-E extract and an oocyte from a donor cycle that produced 15 or fewer oocytes
    Article Snippet: .. GeneSifter® (VizX Labs, Seattle, Wash.) microarray expression analysis software was used to identify differentially expressed transcripts. ..

    Article Title: GENETIC AND FUNCTIONAL CHARACTERIZATION OF THE MOUSE TRL3 LOCUS IN DEFENSE AGAINST TUBERCULOSIS
    Article Snippet: .. The GeneSifter TM microarray data analysis system (VizX Labs, Seattle, WA, USA; www.genesifter.net ) was used to analyze data generated from comparisons between control (uninfected) and M. tuberculosis -infected (day 30 and 70) groups for B6, D2, D2.B6-Chr7 and D2.B6-Chr19 mice individually. ..

    Generated:

    Article Title: Disseminated and Rapidly Fatal Tuberculosis in Mice Bearing a Defective Allele AT IRF-8
    Article Snippet: .. The GeneSifter TM microarray data analysis system (VizX Labs, Seattle, WA, USA; www.genesifter.net ) was used to analyze data generated from comparisons between control (uninfected) and M. tuberculosis -infected (Day 30 and 70) groups for B6 mice. ..

    Article Title: GENETIC AND FUNCTIONAL CHARACTERIZATION OF THE MOUSE TRL3 LOCUS IN DEFENSE AGAINST TUBERCULOSIS
    Article Snippet: .. The GeneSifter TM microarray data analysis system (VizX Labs, Seattle, WA, USA; www.genesifter.net ) was used to analyze data generated from comparisons between control (uninfected) and M. tuberculosis -infected (day 30 and 70) groups for B6, D2, D2.B6-Chr7 and D2.B6-Chr19 mice individually. ..

    Control:

    Article Title: Disseminated and Rapidly Fatal Tuberculosis in Mice Bearing a Defective Allele AT IRF-8
    Article Snippet: .. The GeneSifter TM microarray data analysis system (VizX Labs, Seattle, WA, USA; www.genesifter.net ) was used to analyze data generated from comparisons between control (uninfected) and M. tuberculosis -infected (Day 30 and 70) groups for B6 mice. ..

    Article Title: GENETIC AND FUNCTIONAL CHARACTERIZATION OF THE MOUSE TRL3 LOCUS IN DEFENSE AGAINST TUBERCULOSIS
    Article Snippet: .. The GeneSifter TM microarray data analysis system (VizX Labs, Seattle, WA, USA; www.genesifter.net ) was used to analyze data generated from comparisons between control (uninfected) and M. tuberculosis -infected (day 30 and 70) groups for B6, D2, D2.B6-Chr7 and D2.B6-Chr19 mice individually. ..

    Infection:

    Article Title: Disseminated and Rapidly Fatal Tuberculosis in Mice Bearing a Defective Allele AT IRF-8
    Article Snippet: .. The GeneSifter TM microarray data analysis system (VizX Labs, Seattle, WA, USA; www.genesifter.net ) was used to analyze data generated from comparisons between control (uninfected) and M. tuberculosis -infected (Day 30 and 70) groups for B6 mice. ..

    Article Title: GENETIC AND FUNCTIONAL CHARACTERIZATION OF THE MOUSE TRL3 LOCUS IN DEFENSE AGAINST TUBERCULOSIS
    Article Snippet: .. The GeneSifter TM microarray data analysis system (VizX Labs, Seattle, WA, USA; www.genesifter.net ) was used to analyze data generated from comparisons between control (uninfected) and M. tuberculosis -infected (day 30 and 70) groups for B6, D2, D2.B6-Chr7 and D2.B6-Chr19 mice individually. ..

    Expressing:

    Article Title: Human pluripotent embryonic stem cells produced by nuclear transfer using a somatic cell nucleus treated with HVJ-E extract and an oocyte from a donor cycle that produced 15 or fewer oocytes
    Article Snippet: .. GeneSifter® (VizX Labs, Seattle, Wash.) microarray expression analysis software was used to identify differentially expressed transcripts. ..

    Software:

    Article Title: Human pluripotent embryonic stem cells produced by nuclear transfer using a somatic cell nucleus treated with HVJ-E extract and an oocyte from a donor cycle that produced 15 or fewer oocytes
    Article Snippet: .. GeneSifter® (VizX Labs, Seattle, Wash.) microarray expression analysis software was used to identify differentially expressed transcripts. ..



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    Image Search Results


    Table 2

    Journal:

    Article Title: Systematic Determination of Differential Gene Expression in the Primate Corpus Luteum during the Luteal Phase of the Menstrual Cycle

    doi: 10.1210/me.2007-0484

    Figure Lengend Snippet: Table 2

    Article Snippet: After normalization, GeneSifter (VizX Labs, Seattle, WA) microarray expression analysis software was used to identify differentially expressed transcripts.

    Techniques: Biomarker Discovery, Microarray, Expressing