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Suzhou PANOMIX Biomedical Tech Co Ltd transcriptome
PC biplot of the <t>transcriptome</t> and metabolome of rice seedlings under drought stress and identification of differentially expressed genes and metabolites. (A) PC biplot of transcriptome. (B) PC biplot of metabolome. (C) Volcano plot of differentially expressed genes between NIP and OsCIPK17 -OE9 under drought treatment. (D) Volcano plot of differentially expressed metabolites between NIP and OsCIPK17 -OE9 under drought treatment. (E) KEGG analysis of differentially expressed genes and metabolites between NIP and OsCIPK17 -OE9 under drought treatment. CK means control check, which means growth under normal conditions without drought treatment. D means under drought treatment. OE9 means OsCIPK17 overexpression line 9. NIP-D, NIP-CK, OE9-D, and OE9-CK mean combination of lines and treatment methods. The same meaning as the following figure.
Transcriptome, supplied by Suzhou PANOMIX Biomedical Tech Co Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Article Title: Combined metabolomic and transcriptomic analysis reveals key components of OsCIPK17 overexpression improves drought tolerance in rice

Journal: Frontiers in Plant Science

doi: 10.3389/fpls.2022.1043757

PC biplot of the transcriptome and metabolome of rice seedlings under drought stress and identification of differentially expressed genes and metabolites. (A) PC biplot of transcriptome. (B) PC biplot of metabolome. (C) Volcano plot of differentially expressed genes between NIP and OsCIPK17 -OE9 under drought treatment. (D) Volcano plot of differentially expressed metabolites between NIP and OsCIPK17 -OE9 under drought treatment. (E) KEGG analysis of differentially expressed genes and metabolites between NIP and OsCIPK17 -OE9 under drought treatment. CK means control check, which means growth under normal conditions without drought treatment. D means under drought treatment. OE9 means OsCIPK17 overexpression line 9. NIP-D, NIP-CK, OE9-D, and OE9-CK mean combination of lines and treatment methods. The same meaning as the following figure.
Figure Legend Snippet: PC biplot of the transcriptome and metabolome of rice seedlings under drought stress and identification of differentially expressed genes and metabolites. (A) PC biplot of transcriptome. (B) PC biplot of metabolome. (C) Volcano plot of differentially expressed genes between NIP and OsCIPK17 -OE9 under drought treatment. (D) Volcano plot of differentially expressed metabolites between NIP and OsCIPK17 -OE9 under drought treatment. (E) KEGG analysis of differentially expressed genes and metabolites between NIP and OsCIPK17 -OE9 under drought treatment. CK means control check, which means growth under normal conditions without drought treatment. D means under drought treatment. OE9 means OsCIPK17 overexpression line 9. NIP-D, NIP-CK, OE9-D, and OE9-CK mean combination of lines and treatment methods. The same meaning as the following figure.

Techniques Used: Control, Over Expression

Metabolites and enzymes related to trehalose metabolism. (A) Contents of metabolites in the trehalose pathway. Black boxes indicate the substances detected by the metabolomic analysis, and red boxes indicate the substances not detected by the metabolomic analysis. (B) Expression of enzymes involved in trehalose pathway detected in the transcriptome. Data are presented as mean ± SD of six independent experiments, and significant differences between NIP-CK and OE9-CK/NIP-D or OE9-D and OE9-CK/NIP-D plants according to one-way ANOVA are indicated by asterisks. CK: NIP or OE9 materials without drought treatment. OE9: OsCIPK17 -OE9. D: drought treatment. Asterisks indicate significance (*p < 0.05, **p < 0.01, ***p < 0.001).
Figure Legend Snippet: Metabolites and enzymes related to trehalose metabolism. (A) Contents of metabolites in the trehalose pathway. Black boxes indicate the substances detected by the metabolomic analysis, and red boxes indicate the substances not detected by the metabolomic analysis. (B) Expression of enzymes involved in trehalose pathway detected in the transcriptome. Data are presented as mean ± SD of six independent experiments, and significant differences between NIP-CK and OE9-CK/NIP-D or OE9-D and OE9-CK/NIP-D plants according to one-way ANOVA are indicated by asterisks. CK: NIP or OE9 materials without drought treatment. OE9: OsCIPK17 -OE9. D: drought treatment. Asterisks indicate significance (*p < 0.05, **p < 0.01, ***p < 0.001).

Techniques Used: Expressing

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