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DNA Chip Research Inc microarrays dna chip research
Microarrays Dna Chip Research, supplied by DNA Chip Research Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/dna+microarray+chip/yeast+dna+chip/pmc12237615-410-10-24
Average 90 stars, based on 1 article reviews
microarrays dna chip research - by Bioz Stars, 2026-10
90/100 stars

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Article Title: Transcriptomic approaches to cardiomyocyte-biomaterial interactions: A review
Article Snippet: Investigate the influence of heart-derived collagen on EHT maturation , CM-BM interactions; tissue engineering , hiPSC-CMs , hiPSC-EHT (mainly heart-derived collagen) , Microarrays by DNA Chip Research Inc. , Found the promotive effects of heart-derived collagen on EHT maturation and identified related genes and pathways , 117.

Article Title: Process for detecting toxic substances
Article Snippet: The labeled cDNAs were dissolved in TE buffer (10 mM Tris-HCl/1 mM EDTA, pH8.0), and the solution was dropped on the DNA chip containing the whole genes of yeast (DNA Chip Research Inc. Japan) so that the cDNAs were hybridized on the DNA chip at 65° C. for over 12 hours.

Article Title: Identification of target genes conferring ethanol stress tolerance to Saccharomyces cerevisiae based on DNA microarray data analysis.
Article Snippet: Takashi Hirasawa a,1,2, Katsunori Yoshikawa b,1, Yuki Nakakura a,1, Keisuke Nagahisa b, Chikara Furusawa b, Yoshio Katakura a, Hiroshi Shimizu b,∗, Suteaki Shioya a a Department of Biotechnology, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan b Department of Bioinformatic Engineering, Graduate School of Information Science and Technology, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan

Article Title: Processes for detecting toxic substances
Article Snippet: The labeled cDNAs were dissolved in TE buffer (10mM Tris-HCl/1 mM EDTA, pH8.0), and the solution was dropped on the DNA chip containing the whole genes of yeast (DNA Chip Research Inc. Japan) so that the cDNAs were hybridized on the DNA chip at 65° C. for over 12 hours.

Microarray:

Article Title: Analysis of Mechanisms of T-2 Toxin Toxicity Using Yeast DNA Microarrays
Article Snippet: .. Two color-labeled cDNAs were mixed and hybridized with a yeast microarray (ver.2.0, DNA Chip Research, Inc., Yokohama, Japan) for 24–36 h at 65 °C. ..

Article Title: Cellular Responses to Electrochemical Killing Process by Applying a Constant Potential in Synchronously Cultured Saccharomyces Cerevisiae
Article Snippet: .. 4 DNA microarray hybridization, signal detection and analysis DNA microarrays of yeast open reading frames were obtained from DNA Chip Research Inc. (Yokohama, Japan). .. Microarray hybridization was performed as described previously.4)The microarray was scanned with the ScanarrayTM 4000 Lite (GSI Lumonics), and quantified using the QuantarrayTM software (GSI Lumonics).

Hybridization:

Article Title: Cellular Responses to Electrochemical Killing Process by Applying a Constant Potential in Synchronously Cultured Saccharomyces Cerevisiae
Article Snippet: .. 4 DNA microarray hybridization, signal detection and analysis DNA microarrays of yeast open reading frames were obtained from DNA Chip Research Inc. (Yokohama, Japan). .. Microarray hybridization was performed as described previously.4)The microarray was scanned with the ScanarrayTM 4000 Lite (GSI Lumonics), and quantified using the QuantarrayTM software (GSI Lumonics).

Labeling:

Article Title: Toxicity of methanol and formaldehyde towards Saccharomyces cerevisiae as assessed by DNA microarray analysis.
Article Snippet: To assess the toxicity of the C1 compounds methanol and formaldehyde, gene expression profiles of treated baker’s yeast were analyzed using DNA microarrays.. Among approximately 6,000 open reading frames (ORFs), 314 were repressed and 375 were induced in response to methanol.. The gene process category “energy” comprised the greatest number of induced genes while “protein synthesis” comprised the greatest number of repressed genes.



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The workflow chart of the easyEWAS. Abbreviations: DNAm, DNA methylation; DMP, differentially methylated position; DMR, differentially methylated region; GLM, general linear model; LMM, linear mixed-effects model; CoxPH, Cox proportional hazards model; QQ: quantile–quantile; Boot.CI, bootstrap-derived CI; KEGG, Kyoto Encyclopedia of Genes and Genomes.

Journal: Bioinformatics Advances

Article Title: easyEWAS: a flexible and user-friendly R package for epigenome-wide association study

doi: 10.1093/bioadv/vbaf026

Figure Lengend Snippet: The workflow chart of the easyEWAS. Abbreviations: DNAm, DNA methylation; DMP, differentially methylated position; DMR, differentially methylated region; GLM, general linear model; LMM, linear mixed-effects model; CoxPH, Cox proportional hazards model; QQ: quantile–quantile; Boot.CI, bootstrap-derived CI; KEGG, Kyoto Encyclopedia of Genes and Genomes.

Article Snippet: In conclusion, easyEWAS is an R package that can be easily integrated into various DNA methylation microarrays detected by Illumina HumanMethylation Bead Chip, significantly enhancing the accessibility of EWAS.

Techniques: DNA Methylation Assay, Methylation, Derivative Assay

The function names and their corresponding functionalities within the easyEWAS package.

Journal: Bioinformatics Advances

Article Title: easyEWAS: a flexible and user-friendly R package for epigenome-wide association study

doi: 10.1093/bioadv/vbaf026

Figure Lengend Snippet: The function names and their corresponding functionalities within the easyEWAS package.

Article Snippet: In conclusion, easyEWAS is an R package that can be easily integrated into various DNA methylation microarrays detected by Illumina HumanMethylation Bead Chip, significantly enhancing the accessibility of EWAS.

Techniques: DNA Methylation Assay, Methylation, Biomarker Discovery