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adapter ligation  (Beckman Coulter)


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    Structured Review

    Beckman Coulter adapter ligation
    Adapter Ligation, supplied by Beckman Coulter, used in various techniques. Bioz Stars score: 96/100, based on 1075 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/adaptative/Adapter/pmc09580876-83-49-63
    Average 96 stars, based on 1075 article reviews
    adapter ligation - by Bioz Stars, 2026-10
    96/100 stars

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    Related Articles

    other:

    Article Title: Forensic Validation of the 95K SNP Panel and the Parabon Fx Forensic Analysis Platform for Identification of US Military Unknowns Using Extended Kinship Inference
    Article Snippet: Purification after adapter ligation consisted of a 0.8X AMPure-to-library volume ratio with AMPure XP (Beckman Coulter, Indianapolis, IN, USA) and elution in 20 μL Tris HCl.

    Article Title: The bile acid-CoA ligase, FATP5, is necessary for synthesis of N-acyl taurines in the liver.
    Article Snippet: The total RNA was depleted of rRNA by RiboZero beads, Jo urn al Pr - r oo f fragmented, and cDNA was synthesized using SuperScript III Reverse Transcriptase (Thermo Fisher Scientific). cDNA was adenylated to prime for adapter ligation and after a clean-up using AMPure beads (Beckman Coulter), DNA fragments were amplified using PCR followed by a final clean-up.

    Article Title: Decoding the RNA Regulatory Network in Medaka ( Oryzias latipes ) Spermatogenesis: Insights from a Germ Cell Reprogramming Model.
    Article Snippet: The RNA was fragmented (250–300 bp), reverse-transcribed into cDNA, and subjected to end repair, A-tailing, and adapter ligation. cDNA fragments (~200 bp) were selected using AMPure XP beads (Beckman Coulter, Brea, CA, USA) and amplified by PCR.

    Article Title: Recombinant BMP9 Reinforces Gut Vascular Barrier in Experimental Colitis.
    Article Snippet: Libraries were prepared via end-repair, A-tailing, adapter ligation, and size selection (300 ± 50 bp inserts) with AMPure XP beads (Beckman Coulter, Brea, CA, USA).

    Article Title: Cognitive and Motor Dysfunction in STXBP1 R406H Mice.
    Article Snippet: et al. 2023).. Notably, recent epidemiological studies have identified STXBP1 as the fifth most frequent genetic cause of epileptic developmental disorders (Goss et al. 2024), emphasizing the urgent need to understand the molecular basis of these mutations.. At the neurobiological level, STXBP1 orchestrates SNARE complex assembly (O’Brien et al. 2019), governing not only synaptic transmission but also pivotal developmental processes including cortical neuron radial migration and neurogenesis (Hamada et al. 2017; Munch et al. 2016).

    Article Title: FACT depletion results in a temporal cascade of chromatin disruption preceding transcriptional collapse in stem cells
    Article Snippet: Fragments isolated were used as an input for library build consisting of end repair (NEBNext Ultra II End Prep Kit) and adenylation, adapter ligation, repair using USER enzyme, and subsequent purification with AMPure XP beads (Beckman Coulter).

    Purification:

    Article Title: A distributive germline restricts the spread of new mutations
    Article Snippet: Pollen samples were prepared using 1⁄2 the normal volumes from the NEB kit; endosperm and leaf were prepared using volumes further reduced to 1/8 of a standard reaction. .. Adapter-ligated DNA was purified and concentrated using AmpureXP beads (Beckman Coulter), and Mu TE insertions were amplified through a series of three nested PCR reactions as described ( ). .. Libraries were sequenced by Admera Health on a NovaSeq X Plus, using paired-end 150 bp reads and 10% PhiX added.

    Article Title: Epigenetic dysregulation of IRF9 drives excessive interferon signaling in COPD.
    Article Snippet: Dual-indexing was carried out with the TruSeq panel of indexing primers in a short-cycle PCR using Luna Universal Probe One-Step RT-qPCR reagents (NEB). .. The pooled adapter libraries were purified and size-selected using AMPure XP beads (Beckman Coulter) or carboxyl-coated BOMB beads (Oberacker et al, 2019), and quantified with Qubit Fluorometer using dsDNA-HS reagents (Invitrogen). .. Samples were sequenced by the Cardiff University School of Biosciences Genomics Research Hub on an Illumina MiSeq using Nano flow cells with V2 reagents in paired-end mode with 500 cycles to yield 450 bps forward, and 50 bps reverse reads.

    Amplification:

    Article Title: A distributive germline restricts the spread of new mutations
    Article Snippet: Pollen samples were prepared using 1⁄2 the normal volumes from the NEB kit; endosperm and leaf were prepared using volumes further reduced to 1/8 of a standard reaction. .. Adapter-ligated DNA was purified and concentrated using AmpureXP beads (Beckman Coulter), and Mu TE insertions were amplified through a series of three nested PCR reactions as described ( ). .. Libraries were sequenced by Admera Health on a NovaSeq X Plus, using paired-end 150 bp reads and 10% PhiX added.

    Nested PCR:

    Article Title: A distributive germline restricts the spread of new mutations
    Article Snippet: Pollen samples were prepared using 1⁄2 the normal volumes from the NEB kit; endosperm and leaf were prepared using volumes further reduced to 1/8 of a standard reaction. .. Adapter-ligated DNA was purified and concentrated using AmpureXP beads (Beckman Coulter), and Mu TE insertions were amplified through a series of three nested PCR reactions as described ( ). .. Libraries were sequenced by Admera Health on a NovaSeq X Plus, using paired-end 150 bp reads and 10% PhiX added.



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    FPD response as a function of PIFR for the 26 runs. (A) The runs in red are counted in the desired FPD range (600 ± 200 μg) and (B) the runs in red are counted in the constant FPD region (750 ± 200 μg) for the low resistance RS01 DPI. (For interpretation of the references to colour in this figure legend, the reader is referred to the web version of this article.)

    Journal: International Journal of Pharmaceutics: X

    Article Title: Determination of the optimal resistance in RS01 for robust aerosol performance of inhaled controlled-release budesonide powder for chronic obstructive inflammatory respiratory diseases patients

    doi: 10.1016/j.ijpx.2026.100581

    Figure Lengend Snippet: FPD response as a function of PIFR for the 26 runs. (A) The runs in red are counted in the desired FPD range (600 ± 200 μg) and (B) the runs in red are counted in the constant FPD region (750 ± 200 μg) for the low resistance RS01 DPI. (For interpretation of the references to colour in this figure legend, the reader is referred to the web version of this article.)

    Article Snippet: An impaction test is performed using three size 3 HPMC capsules filled with 20 ± 0.5 mg of the blend, inserted into the RS01 inhaler connected onto the AIT using an RS01 adapter (Copley Scientific).

    Techniques:

    FPD response as a function of PIFR for 23 runs. (A) The runs in red are counted in the desired robust FPD region (600 ± 200 μg) and (B) The runs in red are counted in the constant FPD region (650 ± 200 μg) for the low-medium resistance RS01 DPI. (For interpretation of the references to colour in this figure legend, the reader is referred to the web version of this article.)

    Journal: International Journal of Pharmaceutics: X

    Article Title: Determination of the optimal resistance in RS01 for robust aerosol performance of inhaled controlled-release budesonide powder for chronic obstructive inflammatory respiratory diseases patients

    doi: 10.1016/j.ijpx.2026.100581

    Figure Lengend Snippet: FPD response as a function of PIFR for 23 runs. (A) The runs in red are counted in the desired robust FPD region (600 ± 200 μg) and (B) The runs in red are counted in the constant FPD region (650 ± 200 μg) for the low-medium resistance RS01 DPI. (For interpretation of the references to colour in this figure legend, the reader is referred to the web version of this article.)

    Article Snippet: An impaction test is performed using three size 3 HPMC capsules filled with 20 ± 0.5 mg of the blend, inserted into the RS01 inhaler connected onto the AIT using an RS01 adapter (Copley Scientific).

    Techniques: