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imagene software  (BioDiscovery Inc)

 
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    Structured Review

    BioDiscovery Inc imagene software
    Imagene Software, supplied by BioDiscovery Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/418+microarray+scanner/imagene+software/pm16027733-214-24-25
    Average 90 stars, based on 1 article reviews
    imagene software - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    Fluorescence:

    Article Title: Transcriptional Control of Hypoxic Hyphal Growth in the Fungal Pathogen Candida albicans
    Article Snippet: Slides were washed and air-dried before being scanned using a ScanArray Lite microarray scanner (PerkinElmer). .. Fluorescence intensities were quantified using ImaGene software (BioDiscovery, Inc.), background corrected and normalized for signal intensity (using Lowess normalization). ..

    Software:

    Article Title: Transcriptional Control of Hypoxic Hyphal Growth in the Fungal Pathogen Candida albicans
    Article Snippet: Slides were washed and air-dried before being scanned using a ScanArray Lite microarray scanner (PerkinElmer). .. Fluorescence intensities were quantified using ImaGene software (BioDiscovery, Inc.), background corrected and normalized for signal intensity (using Lowess normalization). ..

    Article Title: Characterization of glycan determinants that mediate recognition of the major Wuchereria bancrofti circulating antigen by diagnostic antibodies.
    Article Snippet: An image of bound fluorescence was obtained using a microarray scanner (Scan Array Express, PerkinElmer Life Sciences). .. The integrated spot intensities were determined using ImaGene software (Biodiscovery Inc, El Segundo, CA). ..

    Article Title: Distinct early life stage gene expression effects of hybridization among European and North American farmed and wild Atlantic salmon populations.
    Article Snippet: Handling Editor: Paul Hohenlohe Abstract Due to multigeneration domestication selection, farmed and wild Atlantic salmon diverge genetically, which raises concerns about potential genetic interactions among escaped farmed and wild populations and disruption of local adaptation through introgression.. When farmed strains of distant geographic origin are used, it is unknown whether the genetic consequences posed by escaped farmed fish will be greater than if more locally derived strains are used.. Quantifying gene transcript expression differences among divergent farmed, wild and F1 hybrids under controlled conditions is one of the ways to explore the consequences of hybridization.

    Article Title: Neuroretinal Cell Culture Model as a Tool for the Development of New Therapeutic Approaches for Oxidative Stress-Induced Ocular Diseases, with a Focus on Glaucoma
    Article Snippet: .. The quantification of spot intensity was performed using Imagene software (Imagene 5.5; BioDiscovery Inc., Los Angeles, CA, USA). ..

    Article Title: Methods of inducing apomictic or sexual reproduction
    Article Snippet: Arrays were incubated at 45° C. for 16 h and scanned using a ScanArray Express HT (Perkin Elmer, Waltham, Mass.) microarray scanner (5 μm resolution). .. Median pixel intensities were captured using Imagene software (Biodiscovery, Inc., El Segundo, CA). ..

    other:

    Article Title: Products of manufacture comprising bacteriophages
    Article Snippet: IMAGENETM software (BioDiscovery, Inc., El Segundo, Calif.) was used to quantify fluorescence.

    Article Title: GlyNet: a multi-task neural network for predicting protein-glycan interactions.
    Article Snippet: 48 ImaGene soware, from BioDiscovery, Inc. El Segundo CA, USA, https://biodiscovery.com.



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    Image Search Results


    Distribution of ASP reporter intensities and positive signal selection cut-offs for F. tularensis SCHU S4 . Pink dots = Individual ASP reporters (mean) signal, yellow line = mean fluorescence of all ASP microarray reporters, light blue line = one standard deviation (SD) of all ASP microarray reporters, mauve line = mean + SD, reporters with signal greater than mean+SD were selected as positive.

    Journal: BMC Microbiology

    Article Title: Development and application of the active surveillance of pathogens microarray to monitor bacterial gene flux

    doi: 10.1186/1471-2180-8-177

    Figure Lengend Snippet: Distribution of ASP reporter intensities and positive signal selection cut-offs for F. tularensis SCHU S4 . Pink dots = Individual ASP reporters (mean) signal, yellow line = mean fluorescence of all ASP microarray reporters, light blue line = one standard deviation (SD) of all ASP microarray reporters, mauve line = mean + SD, reporters with signal greater than mean+SD were selected as positive.

    Article Snippet: The microarrays were scanned using a 418 microarray Scanner (Affymetrix, USA) and intensity fluorescence data acquired using ImaGene 5.5 (BioDiscovery, USA).

    Techniques: Selection, Fluorescence, Microarray, Standard Deviation

    Distribution of ASP reporter intensities and positive signal selection cut-offs for C. difficile 630 . Pink dots = Individual ASP reporters (mean) signal, yellow line = mean fluorescence of all ASP microarray reporters, light blue line = one standard deviation (SD) of all ASP microarray reporters, mauve line = mean + SD, reporters with signal greater than mean+SD were selected as positive.

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    Article Title: Development and application of the active surveillance of pathogens microarray to monitor bacterial gene flux

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    Figure Lengend Snippet: Distribution of ASP reporter intensities and positive signal selection cut-offs for C. difficile 630 . Pink dots = Individual ASP reporters (mean) signal, yellow line = mean fluorescence of all ASP microarray reporters, light blue line = one standard deviation (SD) of all ASP microarray reporters, mauve line = mean + SD, reporters with signal greater than mean+SD were selected as positive.

    Article Snippet: The microarrays were scanned using a 418 microarray Scanner (Affymetrix, USA) and intensity fluorescence data acquired using ImaGene 5.5 (BioDiscovery, USA).

    Techniques: Selection, Fluorescence, Microarray, Standard Deviation

    Distribution of ASP reporter intensities and positive signal selection cut-offs for S. aureus COL . Pink dots = Individual ASP reporters (mean) signal, yellow line = mean fluorescence of all ASP microarray reporters, light blue line = one standard deviation (SD) of all ASP microarray reporters, mauve line = mean + SD, reporters with signal greater than mean+SD were selected as positive.

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    doi: 10.1186/1471-2180-8-177

    Figure Lengend Snippet: Distribution of ASP reporter intensities and positive signal selection cut-offs for S. aureus COL . Pink dots = Individual ASP reporters (mean) signal, yellow line = mean fluorescence of all ASP microarray reporters, light blue line = one standard deviation (SD) of all ASP microarray reporters, mauve line = mean + SD, reporters with signal greater than mean+SD were selected as positive.

    Article Snippet: The microarrays were scanned using a 418 microarray Scanner (Affymetrix, USA) and intensity fluorescence data acquired using ImaGene 5.5 (BioDiscovery, USA).

    Techniques: Selection, Fluorescence, Microarray, Standard Deviation

    Potential horizontally acquired genes predicted by ASP microarray in a clinical CA-MRSA isolate

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    Figure Lengend Snippet: Potential horizontally acquired genes predicted by ASP microarray in a clinical CA-MRSA isolate

    Article Snippet: The microarrays were scanned using a 418 microarray Scanner (Affymetrix, USA) and intensity fluorescence data acquired using ImaGene 5.5 (BioDiscovery, USA).

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    Positive ASP microarray reporters from a clinical isolate of S. maltophilia

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    Figure Lengend Snippet: Positive ASP microarray reporters from a clinical isolate of S. maltophilia

    Article Snippet: The microarrays were scanned using a 418 microarray Scanner (Affymetrix, USA) and intensity fluorescence data acquired using ImaGene 5.5 (BioDiscovery, USA).

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