Journal: BMC Biochemistry

Article Title: Occurrence and sequence of Sphaeroides Heme Protein and Diheme Cytochrome C in purple photosynthetic bacteria in the family Rhodobacteraceae

doi: 10.1186/1471-2091-11-24

Figure Lengend Snippet: Rhodobacteraceae species and strains

Article Snippet: When we revived dried cultures (obtained from DSMZ) of Rhodovulum euryhalinum and Rhodovulum iodosum , the bacteria quickly grew, but the rRNA sequences indicate that they are not what was expected.

Techniques:

Journal: BMC Biochemistry

Article Title: Occurrence and sequence of Sphaeroides Heme Protein and Diheme Cytochrome C in purple photosynthetic bacteria in the family Rhodobacteraceae

doi: 10.1186/1471-2091-11-24

Figure Lengend Snippet: A) Amino acid sequence alignment of SHP and B) Tree showing relationships among selected species (percentage identities for the branches are indicated) . A) Symbols are: Rhodobacter sphaeroides strain 2.4.1 (RS), Rb. sphaeroides strain IL106 (IL), Rhodobacter changlensis (CH), Rhodobacter sp. strain SW2 (SW), Rhodovulum adriaticum (RA), Rhodovulum marinum strain RE (RE), Allochromatium vinosum (AV), Rhodospirillum rubrum (RR), Rhodospirillum centenum (RC), Rhodoferax ferrireducens (RF1 & RF2), Campylobacter fetus (CF), Arcobacter butzleri (AB), and Wolinella succinogenes (WS). The signal peptides as well as the amino acids mentioned in the text are in bold. Helices from the three-dimensional structure are underlined and important residues numbered according to Rb. sphaeroides .

Article Snippet: When we revived dried cultures (obtained from DSMZ) of Rhodovulum euryhalinum and Rhodovulum iodosum , the bacteria quickly grew, but the rRNA sequences indicate that they are not what was expected.

Techniques: Sequencing

Journal: BMC Biochemistry

Article Title: Occurrence and sequence of Sphaeroides Heme Protein and Diheme Cytochrome C in purple photosynthetic bacteria in the family Rhodobacteraceae

doi: 10.1186/1471-2091-11-24

Figure Lengend Snippet: Amino acid sequence alignment of DHC . The same species and abbreviations as in Figure 1 followed by s for sDHC and m for mDHC or numbers 1 or 2 where there is more than one sDHC. Species not represented in Figure 1 are Rhodovulum robiginosum strain RI (RIs) and Thermochromatium tepidum (TT) for which we found sDHC but not SHP. Helices from the three-dimensional structure are underlined and important sequence positions numbered according to Rb. sphaeroides .

Article Snippet: When we revived dried cultures (obtained from DSMZ) of Rhodovulum euryhalinum and Rhodovulum iodosum , the bacteria quickly grew, but the rRNA sequences indicate that they are not what was expected.

Techniques: Sequencing

Journal: BMC Biochemistry

Article Title: Occurrence and sequence of Sphaeroides Heme Protein and Diheme Cytochrome C in purple photosynthetic bacteria in the family Rhodobacteraceae

doi: 10.1186/1471-2091-11-24

Figure Lengend Snippet: Organization of SHP gene clusters . RBS ( Rhodobacter sphaeroides strains 2.4.1 and 2.4.9), RSW ( Rhodobacter sp. SW2), RIL ( Rb. sphaeroides strain IL106), Chs ( Rhodobacter changlensis ), RRE ( Rhodovulum marinum strain RE), RsR ( Rhodospirillum rubrum ), RsC ( Rhodospirillum centenum ), ShO ( Shewanella oneidensis ), AcV ( Allochromatium vinosum , a single cluster separated at the boundary between operons 1 and 2), LtC ( Leptothrix cholodnii ), CbF ( Campylobacter fetus ), and WoS ( Wolinella succinogenes ). CytB (Cytochrome b), mDHC (membrane diheme cytochrome c), SHP (sphaeroides heme protein), sDHC (soluble diheme cytochrome c), RR (response regulator), SK (sensor kinase), and Orf1 (periplasmic accessory protein) postulated to be part of the sensor, SK1. Slash indicates chimeric genes and presumably proteins as well. Spacing or degree of overlap between genes is indicated. Arrows show direction of transcription.

Article Snippet: When we revived dried cultures (obtained from DSMZ) of Rhodovulum euryhalinum and Rhodovulum iodosum , the bacteria quickly grew, but the rRNA sequences indicate that they are not what was expected.

Techniques: Membrane