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the customized oswrkyarray microarrays  (Virtek Biotech Canada)
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Virtek Biotech Canada the customized oswrkyarray microarrays
Clustering of OsWRKY genes according to their expression profiles in the <t>OsWRKYARRAY</t> . The OsWRKYARRAY was constitued of 104 probesets representing all members of the rice WRKY gene family. The expression of the 104 OsWRKY genes was assessed upon inoculation with Magnaporthe oryzae isolate from rice (FR13), M. oryzae BR32 from wheat, M. grisea BR29 from crabgrass and upon application of osmotic stress (mannitol) in hydroponic conditions. Panel A T-test P-values (shown by a green - black gradient) of treated vs control of the corresponding ratios shown in Panel B. The range of log transformed P-values comprised values between 0.01 (green) and 1 (black). P-values lower than 0.01 were visualized as 0.01. Panel B log 2 (Treated/Control) ratio values (shown by a green - magenta gradient). Red boxes with capital letters from A to F highlight the presence of co-expressed WRKY gene clusters. A blue dot indicates a OsWRKY gene differentially-regulated in two different stress conditions; a yellow dot indicates a OsWRKY gene-differentially regulated only in one stress condition. See Table 1 for numeric values of differentially-regulated OsWRKY genes.
The Customized Oswrkyarray Microarrays, supplied by Virtek Biotech Canada, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Clustering of OsWRKY genes according to their expression profiles in the OsWRKYARRAY . The OsWRKYARRAY was constitued of 104 probesets representing all members of the rice WRKY gene family. The expression of the 104 OsWRKY genes was assessed upon inoculation with Magnaporthe oryzae isolate from rice (FR13), M. oryzae BR32 from wheat, M. grisea BR29 from crabgrass and upon application of osmotic stress (mannitol) in hydroponic conditions. Panel A T-test P-values (shown by a green - black gradient) of treated vs control of the corresponding ratios shown in Panel B. The range of log transformed P-values comprised values between 0.01 (green) and 1 (black). P-values lower than 0.01 were visualized as 0.01. Panel B log 2 (Treated/Control) ratio values (shown by a green - magenta gradient). Red boxes with capital letters from A to F highlight the presence of co-expressed WRKY gene clusters. A blue dot indicates a OsWRKY gene differentially-regulated in two different stress conditions; a yellow dot indicates a OsWRKY gene-differentially regulated only in one stress condition. See Table 1 for numeric values of differentially-regulated OsWRKY genes.

Journal: BMC Plant Biology

Article Title: Characterization of WRKY co-regulatory networks in rice and Arabidopsis

doi: 10.1186/1471-2229-9-120

Figure Lengend Snippet: Clustering of OsWRKY genes according to their expression profiles in the OsWRKYARRAY . The OsWRKYARRAY was constitued of 104 probesets representing all members of the rice WRKY gene family. The expression of the 104 OsWRKY genes was assessed upon inoculation with Magnaporthe oryzae isolate from rice (FR13), M. oryzae BR32 from wheat, M. grisea BR29 from crabgrass and upon application of osmotic stress (mannitol) in hydroponic conditions. Panel A T-test P-values (shown by a green - black gradient) of treated vs control of the corresponding ratios shown in Panel B. The range of log transformed P-values comprised values between 0.01 (green) and 1 (black). P-values lower than 0.01 were visualized as 0.01. Panel B log 2 (Treated/Control) ratio values (shown by a green - magenta gradient). Red boxes with capital letters from A to F highlight the presence of co-expressed WRKY gene clusters. A blue dot indicates a OsWRKY gene differentially-regulated in two different stress conditions; a yellow dot indicates a OsWRKY gene-differentially regulated only in one stress condition. See Table 1 for numeric values of differentially-regulated OsWRKY genes.

Article Snippet: The customized OsWRKYARRAY microarrays were produced using a Virtek ChipWriter Pro contact printing robot.

Techniques: Expressing, Transformation Assay